Guide to the Human Genome
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Name: OR2AT4 Sequence: fasta or formatted (320aa) NCBI GI: 52627217
Description:

olfactory receptor, family 2, subfamily AT, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         29           2
 C cysteine            3.1         10           1
 D aspartate           3.8         12           1
 E glutamate           1.6          5           1
 F phenylalanine       6.6         21           2
 G glycine             2.8          9           1
 H histidine           2.5          8           1
 I isoleucine          7.2         23           1
 K lysine              1.6          5           1
 L leucine            15.9         51           3
 M methionine          3.8         12           1
 N asparagine          2.8          9           1
 P proline             5.6         18           1
 Q glutamine           2.2          7           1
 R arginine            2.8          9           1
 S serine              8.8         28           2
 T threonine           6.2         20           4
 V valine              8.1         26           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily AT, member 4... 
OR6Y1                 0.371   olfactory receptor, family 6, subfamily Y, member 1 ...
OR10A2                0.360   olfactory receptor, family 10, subfamily A, member 2...
OR10A5                0.350   olfactory receptor, family 10, subfamily A, member 5...
OR6N1                 0.345   olfactory receptor, family 6, subfamily N, member 1 ...
OR6P1                 0.345   olfactory receptor, family 6, subfamily P, member 1...
OR2A12                0.343   olfactory receptor, family 2, subfamily A, member 12...
OR11A1                0.343   olfactory receptor, family 11, subfamily A, member 1 ...
OR6N2                 0.342   olfactory receptor, family 6, subfamily N, member 2 ...
OR6F1                 0.338   olfactory receptor, family 6, subfamily F, member 1 ...
OR7C1                 0.338   olfactory receptor, family 7, subfamily C, member 1 ...
OR1C1                 0.337   olfactory receptor, family 1, subfamily C, member 1...
OR1L6                 0.337   olfactory receptor, family 1, subfamily L, member 6 ...
OR13C8                0.337   olfactory receptor, family 13, subfamily C, member 8...
OR2A1                 0.335   olfactory receptor, family 2, subfamily A, member 1 ...
OR1L4                 0.335   olfactory receptor, family 1, subfamily L, member 4 ...
OR2A42                0.335   olfactory receptor, family 2, subfamily A, member 42...
OR7D4                 0.335   olfactory receptor, family 7, subfamily D, member 4 ...
OR1F1                 0.335   olfactory receptor, family 1, subfamily F, member 1 [...
OR6B2                 0.333   olfactory receptor, family 6, subfamily B, member 2 ...
OR1J2                 0.333   olfactory receptor, family 1, subfamily J, member 2 ...
OR6B3                 0.333   olfactory receptor, family 6, subfamily B, member 3 ...
OR13F1                0.332   olfactory receptor, family 13, subfamily F, member 1...
OR1N1                 0.332   olfactory receptor, family 1, subfamily N, member 1 ...
OR10R2                0.330   olfactory receptor, family 10, subfamily R, member 2...
OR2M2                 0.327   olfactory receptor, family 2, subfamily M, member 2 ...
OR7A5                 0.327   olfactory receptor, family 7, subfamily A, member 5 [...
OR1M1                 0.327   olfactory receptor, family 1, subfamily M, member 1 ...
OR1J1                 0.327   olfactory receptor, family 1, subfamily J, member 1 ...
OR5V1                 0.327   olfactory receptor, family 5, subfamily V, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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