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Search of human proteins with 66912196
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66912196 hypothetical protein LOC388722 [Homo sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66912196 hypothetical protein LOC388722 [Homo sapiens] 305 9e-84
gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2... 33 0.11
gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1... 33 0.11
gi|52345387 meteorin, glial cell differentiation regulator-like ... 33 0.11
gi|113421471 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|169190076 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|169216272 PREDICTED: hypothetical protein [Homo sapiens] 32 0.25
gi|169216572 PREDICTED: hypothetical protein [Homo sapiens] 32 0.25
gi|219555736 zinc finger protein 438 isoform b [Homo sapiens] 32 0.25
gi|219555734 zinc finger protein 438 isoform b [Homo sapiens] 32 0.25
gi|219555732 zinc finger protein 438 isoform c [Homo sapiens] 32 0.25
gi|219555729 zinc finger protein 438 isoform a [Homo sapiens] 32 0.25
gi|219555727 zinc finger protein 438 isoform a [Homo sapiens] 32 0.25
gi|219555725 zinc finger protein 438 isoform a [Homo sapiens] 32 0.25
gi|33300651 zinc finger protein 438 isoform a [Homo sapiens] 32 0.25
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 32 0.25
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 31 0.32
gi|5031887 LIM domain containing preferred translocation partner... 31 0.32
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 31 0.32
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 31 0.32
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 31 0.32
gi|239752834 PREDICTED: hypothetical protein [Homo sapiens] 30 0.55
gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo ... 30 0.55
gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo ... 30 0.55
gi|69354859 ADAM metallopeptidase domain 8 precursor [Homo sapiens] 30 0.55
gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo sapi... 30 0.55
gi|117938759 GNAS complex locus XLas [Homo sapiens] 30 0.71
gi|19743806 roundabout 1 isoform b [Homo sapiens] 29 1.2
gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo ... 29 1.2
gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo ... 29 1.2
>gi|66912196 hypothetical protein LOC388722 [Homo sapiens]
Length = 145
Score = 305 bits (781), Expect = 9e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MAARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRP 60
MAARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRP
Sbjct: 1 MAARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRP 60
Query: 61 ERAARPSVSEELTAAERQIAELHAAACAAGQLNYVDPATGYVVLTQIAHLQRGECCGSAC 120
ERAARPSVSEELTAAERQIAELHAAACAAGQLNYVDPATGYVVLTQIAHLQRGECCGSAC
Sbjct: 61 ERAARPSVSEELTAAERQIAELHAAACAAGQLNYVDPATGYVVLTQIAHLQRGECCGSAC 120
Query: 121 RHCPYGQVNVKDPSKKKQFNSYFYV 145
RHCPYGQVNVKDPSKKKQFNSYFYV
Sbjct: 121 RHCPYGQVNVKDPSKKKQFNSYFYV 145
>gi|125625322 RALBP1 associated Eps domain containing 2 isoform 2
[Homo sapiens]
Length = 659
Score = 32.7 bits (73), Expect = 0.11
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 20/126 (15%)
Query: 2 AARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGR-P 60
AA A AA P PL + G +Q S C G+A PG P
Sbjct: 3 AAAAAAAAAAAAAAAGGGCGSGPPPLLLSEGEQQCYSELFA-----RCAGAAGGGPGSGP 57
Query: 61 ERAARPSVSEELTAAERQIAELHAAA-------------CAAGQLNYVDPATGYVVLTQI 107
AAR + TAA +A+L A+ C A ++ Y P Y+ L I
Sbjct: 58 PEAARVAPG-TATAAAGPVADLFRASQLPAETLHQITELCGAKRVGYFGPTQFYIALKLI 116
Query: 108 AHLQRG 113
A Q G
Sbjct: 117 AAAQSG 122
>gi|125625326 RALBP1 associated Eps domain containing 2 isoform 1
[Homo sapiens]
Length = 660
Score = 32.7 bits (73), Expect = 0.11
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 20/126 (15%)
Query: 2 AARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGR-P 60
AA A AA P PL + G +Q S C G+A PG P
Sbjct: 3 AAAAAAAAAAAAAAAGGGCGSGPPPLLLSEGEQQCYSELFA-----RCAGAAGGGPGSGP 57
Query: 61 ERAARPSVSEELTAAERQIAELHAAA-------------CAAGQLNYVDPATGYVVLTQI 107
AAR + TAA +A+L A+ C A ++ Y P Y+ L I
Sbjct: 58 PEAARVAPG-TATAAAGPVADLFRASQLPAETLHQITELCGAKRVGYFGPTQFYIALKLI 116
Query: 108 AHLQRG 113
A Q G
Sbjct: 117 AAAQSG 122
>gi|52345387 meteorin, glial cell differentiation regulator-like
[Homo sapiens]
Length = 311
Score = 32.7 bits (73), Expect = 0.11
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 2 AARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPE 61
AAR W R G R P+ PPP PL L L L G G S +
Sbjct: 4 AARAAWGRAGQPWPRPPAPGPPPPPL--------PLLLLLLAGLLGGAGAQYSS-----D 50
Query: 62 RAARPSVSEELTAAERQIAELHAAACAAGQLNYVDPATGYVV 103
R + A +++ +++ CAAG + ++ P +V
Sbjct: 51 RCSWKGSGLTHEAHRKEVEQVY-LRCAAGAVEWMYPTGALIV 91
>gi|113421471 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 32.0 bits (71), Expect = 0.19
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 2 AARQIWARTGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPG 58
A R W G +P+ PP P V A L +LCPAN G C P PG
Sbjct: 31 ALRLAWWNMG----HRPNLGQPPHPNAVAAA----LHASLCPANWGTCPLGKPGYPG 79
>gi|169190076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 161
Score = 32.0 bits (71), Expect = 0.19
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 17 QPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPG 58
+P+ PP P V A L +LCPAN G C P PG
Sbjct: 4 RPNLGQPPHPNAVAAA----LHASLCPANRGTCPLGKPGYPG 41
>gi|169216272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 31.6 bits (70), Expect = 0.25
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 19/117 (16%)
Query: 11 GAALCRQPSAAPPPAPLWVRAGFRQQLSLT------LCPANEG------NCGGSAPSTPG 58
G PS P+P W+ + LT +C ++ G C STP
Sbjct: 58 GQRTSETPSTMRVPSPSWIPSTSWGPTPLTGHSNSQVCSSSHGWNNSYDCCTSQGQSTPR 117
Query: 59 RPERAARPSVSEELTAAER-------QIAELHAAACAAGQLNYVDPATGYVVLTQIA 108
RP + PS S+ L A+E ++ L + + G N+ P+T + IA
Sbjct: 118 RPSVSEIPSTSQGLGASETPNTNTYWDLSTLETPSPSQGLSNWEAPSTSSIPNASIA 174
>gi|169216572 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 31.6 bits (70), Expect = 0.25
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 19/117 (16%)
Query: 11 GAALCRQPSAAPPPAPLWVRAGFRQQLSLT------LCPANEG------NCGGSAPSTPG 58
G PS P+P W+ + LT +C ++ G C STP
Sbjct: 58 GQRTSETPSTMRVPSPSWIPSTSWGPTPLTGHSNSQVCSSSHGWNNSYDCCTSQGQSTPR 117
Query: 59 RPERAARPSVSEELTAAER-------QIAELHAAACAAGQLNYVDPATGYVVLTQIA 108
RP + PS S+ L A+E ++ L + + G N+ P+T + IA
Sbjct: 118 RPSVSEIPSTSQGLGASETPNTNTYWDLSTLETPSPSQGLSNWEAPSTSSIPNASIA 174
>gi|219555736 zinc finger protein 438 isoform b [Homo sapiens]
Length = 818
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 140 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 187
>gi|219555734 zinc finger protein 438 isoform b [Homo sapiens]
Length = 818
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 140 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 187
>gi|219555732 zinc finger protein 438 isoform c [Homo sapiens]
Length = 779
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 101 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 148
>gi|219555729 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 150 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 197
>gi|219555727 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 150 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 197
>gi|219555725 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 150 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 197
>gi|33300651 zinc finger protein 438 isoform a [Homo sapiens]
Length = 828
Score = 31.6 bits (70), Expect = 0.25
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 43 PANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACAAG 90
PA C +PS P PE +PS EE+ + E+ A + AA G
Sbjct: 150 PAQTQMCPQMSPSPPHHPELLYKPSPFEEVPSLEQAPASISTAALTNG 197
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 31.6 bits (70), Expect = 0.25
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 17 QPSAAPPPAPLW---VRAGFRQQ--LSLTLCPANEGNCGGS--APSTPGRPERAARPSVS 69
QP+AAP PAP ++A RQQ + T PA +G GS PS+P + +RA +
Sbjct: 578 QPAAAPQPAPAQEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSP-KTQRAGHRRIL 636
Query: 70 EELT------AAERQIAELHAAACAAGQLNYVDPAT 99
++T + +L AA A LN AT
Sbjct: 637 SDVTHSAVFGVPASKSTQLLQAAAAEASLNKSKSAT 672
>gi|126012562 low density lipoprotein-related protein 1 [Homo
sapiens]
Length = 4544
Score = 31.2 bits (69), Expect = 0.32
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 11/79 (13%)
Query: 19 SAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQ 78
S PP + + +QQ+ C N G C +TPG S + AE Q
Sbjct: 784 SERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG----------SRQCACAEDQ 833
Query: 79 IAELHAAACAAGQLNYVDP 97
+ + C A +YV P
Sbjct: 834 VLDADGVTCLANP-SYVPP 851
>gi|5031887 LIM domain containing preferred translocation partner in
lipoma [Homo sapiens]
Length = 612
Score = 31.2 bits (69), Expect = 0.32
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 14/116 (12%)
Query: 18 PSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPSVSEELTAAER 77
P +AP PL + G + G G S+ + RPE + L E
Sbjct: 359 PVSAPCAPPLQPKGG------------HSGQLGPSSVAPSFRPEDELEHLTKKMLYDMEN 406
Query: 78 QIAELHAAACAAGQLNYVDPATGYVVLTQIAHLQRGEC--CGSACRHCPYGQVNVK 131
A+ + CA N V TG + Q+ H+ C C + R P+ V K
Sbjct: 407 PPADEYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKK 462
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo
sapiens]
Length = 170
Score = 31.2 bits (69), Expect = 0.32
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 19/64 (29%)
Query: 9 RTGAALCRQPSAAPP-PAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPS 67
R GAA +P+ APP PAP PA G APS P PE AA P+
Sbjct: 28 RRGAAASPEPARAPPEPAP----------------PAEA--TGAPAPSRPCAPEPAASPA 69
Query: 68 VSEE 71
EE
Sbjct: 70 GPEE 73
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo
sapiens]
Length = 177
Score = 31.2 bits (69), Expect = 0.32
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 19/64 (29%)
Query: 9 RTGAALCRQPSAAPP-PAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPS 67
R GAA +P+ APP PAP PA G APS P PE AA P+
Sbjct: 28 RRGAAASPEPARAPPEPAP----------------PAEA--TGAPAPSRPCAPEPAASPA 69
Query: 68 VSEE 71
EE
Sbjct: 70 GPEE 73
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo
sapiens]
Length = 204
Score = 31.2 bits (69), Expect = 0.32
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 19/64 (29%)
Query: 9 RTGAALCRQPSAAPP-PAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPS 67
R GAA +P+ APP PAP PA G APS P PE AA P+
Sbjct: 28 RRGAAASPEPARAPPEPAP----------------PAEA--TGAPAPSRPCAPEPAASPA 69
Query: 68 VSEE 71
EE
Sbjct: 70 GPEE 73
>gi|239752834 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 30.4 bits (67), Expect = 0.55
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 30 RAGFRQQLSLTLCPAN-EGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACA 88
R + + SL + P N + CGG S G P A+ + A +R A + CA
Sbjct: 23 RQSLQIRSSLKVPPCNFQTACGGGVSS--GDPPAASWRKAAASFPA-QRSAAASSGSCCA 79
Query: 89 AGQLNYVDPATGYVVLTQIAHLQRGECCGSACRHCP 124
A +L + DP ++ +R G+ CP
Sbjct: 80 AAKLRHPDPLGTLTSCRELRESRRESGRGARAADCP 115
>gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo
sapiens]
Length = 181
Score = 30.4 bits (67), Expect = 0.55
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 30 RAGFRQQLSLTLCPAN-EGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACA 88
R + + SL + P N + CGG S G P A+ + A +R A + CA
Sbjct: 23 RQSLQIRSSLKVPPCNFQTACGGGVSS--GDPPAASWRKAAASFPA-QRSAAASSGSCCA 79
Query: 89 AGQLNYVDPATGYVVLTQIAHLQRGECCGSACRHCP 124
A +L + DP ++ +R G+ CP
Sbjct: 80 AAKLRHPDPLGTLTSCRELRESRRESGRGARAADCP 115
>gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo
sapiens]
Length = 181
Score = 30.4 bits (67), Expect = 0.55
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 30 RAGFRQQLSLTLCPAN-EGNCGGSAPSTPGRPERAARPSVSEELTAAERQIAELHAAACA 88
R + + SL + P N + CGG S G P A+ + A +R A + CA
Sbjct: 23 RQSLQIRSSLKVPPCNFQTACGGGVSS--GDPPAASWRKAAASFPA-QRSAAASSGSCCA 79
Query: 89 AGQLNYVDPATGYVVLTQIAHLQRGECCGSACRHCP 124
A +L + DP ++ +R G+ CP
Sbjct: 80 AAKLRHPDPLGTLTSCRELRESRRESGRGARAADCP 115
>gi|69354859 ADAM metallopeptidase domain 8 precursor [Homo sapiens]
Length = 856
Score = 30.4 bits (67), Expect = 0.55
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 19 SAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPSVSEELTAAERQ 78
S+ P P P++ R +Q + T P G+ + PG E A P V+ + +Q
Sbjct: 757 SSPPFPVPVYTRQAPKQVIKPTFAPPVPPVKPGAGAANPGPAEGAVGPKVALKPPIQRKQ 816
Query: 79 IAEL 82
AEL
Sbjct: 817 GAEL 820
>gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo
sapiens]
Length = 450
Score = 30.4 bits (67), Expect = 0.55
Identities = 26/73 (35%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 24 PAPLWVRAGFRQQLSLTLCPANEGN-CGGSAP----STPGRPERAARPSVS--EELTAAE 76
P P W RA L+ LC G CG S P +P PE A P E
Sbjct: 331 PVPAWARALLLGHLARGLCVRERGEPCGQSRPPELSPSPQSPEGGAGPPAGPCHEPRCLC 390
Query: 77 RQIAELHAAACAA 89
RQ A LH A A
Sbjct: 391 RQEALLHHVATIA 403
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 30.0 bits (66), Expect = 0.71
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 10 TGAALCRQPSAAPPPAPLWVRAGFRQQLSLTLCPANEGNCGGSAPSTPGRPERAARPSVS 69
+GA S A P AP +G PA+ + G+AP P P+ A P
Sbjct: 422 SGAFAADPDSGAAPAAPADPDSGAAPD-----APADPDS--GAAPDAPADPDAGAAPEAP 474
Query: 70 EELTAAERQIAELHAAACAAG 90
AAE + A + AA AG
Sbjct: 475 AAPAAAETRAAHVAPAAPDAG 495
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 29.3 bits (64), Expect = 1.2
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 31 AGFRQQLSLTLCPANEGNCGGSAPSTPGRP------ERAARPSVSEELTAAERQIAELHA 84
AG R+ S T P GG A S+ GRP E AA+P +++ +
Sbjct: 894 AGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSI 953
Query: 85 AACAAGQLNYVDPATGY 101
+ C AG N T Y
Sbjct: 954 SCCTAGNGNSDSNLTTY 970
>gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo
sapiens]
Length = 1562
Score = 29.3 bits (64), Expect = 1.2
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 31 AGFRQQLSLTLCPANEGNCGGSAPSTPGRP------ERAARPSVSEELTAAERQIAELHA 84
AG R+ S T P GG A S+ GRP E AA+P +++ +
Sbjct: 897 AGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSI 956
Query: 85 AACAAGQLNYVDPATGY 101
+ C AG N T Y
Sbjct: 957 SCCTAGNGNSDSNLTTY 973
>gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo
sapiens]
Length = 1615
Score = 29.3 bits (64), Expect = 1.2
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 31 AGFRQQLSLTLCPANEGNCGGSAPSTPGRP------ERAARPSVSEELTAAERQIAELHA 84
AG R+ S T P GG A S+ GRP E AA+P +++ +
Sbjct: 897 AGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSI 956
Query: 85 AACAAGQLNYVDPATGY 101
+ C AG N T Y
Sbjct: 957 SCCTAGNGNSDSNLTTY 973
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,045,043
Number of Sequences: 37866
Number of extensions: 338510
Number of successful extensions: 1828
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1760
Number of HSP's gapped (non-prelim): 139
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.