Guide to the Human Genome
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Search of human proteins with 6678676

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6678676 component of oligomeric golgi complex 2 isoform 1
[Homo sapiens]
         (738 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Ho...  1442   0.0  
gi|223029519 component of oligomeric golgi complex 2 isoform 2 [...  1436   0.0  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         41   0.003
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         41   0.003
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    37   0.086
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    37   0.086
gi|240849567 component of oligomeric golgi complex 5 isoform 3 [...    37   0.086
gi|240849537 component of oligomeric golgi complex 5 isoform 2 [...    37   0.086
gi|240849531 component of oligomeric golgi complex 5 isoform 1 [...    37   0.086
gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo ...    36   0.11 
gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo ...    36   0.11 
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]            35   0.25 
gi|109255234 centrosomal protein 290kDa [Homo sapiens]                 34   0.43 
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa...    34   0.56 
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap...    34   0.56 
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap...    34   0.56 
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]         33   0.73 
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa...    33   0.95 
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s...    33   0.95 
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...    33   0.95 
gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]            33   0.95 
gi|112734867 retinitis pigmentosa GTPase regulator interacting p...    32   1.6  
gi|153945755 zinc finger protein 608 [Homo sapiens]                    32   1.6  
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    32   1.6  
gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens]      32   1.6  
gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens]      32   1.6  
gi|47458820 signal transducer and activator of transcription 3 i...    32   2.1  
gi|21618338 signal transducer and activator of transcription 3 i...    32   2.1  
gi|21618340 signal transducer and activator of transcription 3 i...    32   2.1  
gi|125628636 keratin 80 isoform a [Homo sapiens]                       32   2.1  

>gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Homo
           sapiens]
          Length = 738

 Score = 1442 bits (3733), Expect = 0.0
 Identities = 738/738 (100%), Positives = 738/738 (100%)

Query: 1   MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
           MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
Sbjct: 1   MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60

Query: 61  VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
           VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
Sbjct: 61  VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120

Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
           EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
Sbjct: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180

Query: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
           QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
Sbjct: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240

Query: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
           RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
Sbjct: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300

Query: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
           EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
Sbjct: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360

Query: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
           QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
Sbjct: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420

Query: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
           RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
Sbjct: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480

Query: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
           GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM
Sbjct: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540

Query: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600
           IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV
Sbjct: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600

Query: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660
           PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM
Sbjct: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660

Query: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720
           EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS
Sbjct: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720

Query: 721 ALAELVAAAKDQATAEQP 738
           ALAELVAAAKDQATAEQP
Sbjct: 721 ALAELVAAAKDQATAEQP 738


>gi|223029519 component of oligomeric golgi complex 2 isoform 2
           [Homo sapiens]
          Length = 737

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 737/738 (99%), Positives = 737/738 (99%), Gaps = 1/738 (0%)

Query: 1   MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
           MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
Sbjct: 1   MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60

Query: 61  VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
           VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
Sbjct: 61  VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120

Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
           EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
Sbjct: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180

Query: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
           QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
Sbjct: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240

Query: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
           RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
Sbjct: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300

Query: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
           EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
Sbjct: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360

Query: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
           QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
Sbjct: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420

Query: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
           RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
Sbjct: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480

Query: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
           GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM
Sbjct: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540

Query: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600
           IGFKNFSSIS ALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV
Sbjct: 541 IGFKNFSSIS-ALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 599

Query: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660
           PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM
Sbjct: 600 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 659

Query: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720
           EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS
Sbjct: 660 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 719

Query: 721 ALAELVAAAKDQATAEQP 738
           ALAELVAAAKDQATAEQP
Sbjct: 720 ALAELVAAAKDQATAEQP 737


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 58/288 (20%), Positives = 131/288 (45%), Gaps = 42/288 (14%)

Query: 23  MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKL----LKTAMVELINKDYADFVNLSTNL 78
           +KED +++H       R+ +E+L+D+L ++YK     L+  M + I     +  NL T  
Sbjct: 640 LKEDLEIEH-------RINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITK- 691

Query: 79  VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDI----RKKKMCVLRLI 134
                  NQL + + +L++   SL +S SE +      + K+ +I     K+K  + + +
Sbjct: 692 ------QNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEV 745

Query: 135 QVIR-SVEKIEKILNSQSS---KETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGM 190
           Q ++   E +EK +  + +   ++ + LEA + +L  +  ++   +  ++     Q + +
Sbjct: 746 QELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDE--KKTLEDMLKIHTPVSQEERL 803

Query: 191 PLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVG-- 248
             LD ++ +     ++ ++ +E L+ E     + D+ + C++    I+K R+  +     
Sbjct: 804 IFLDSIKSK--SKDSVWEKEIEILIEE-----NEDLKQQCIQLNEEIEKQRNTFSFAEKN 856

Query: 249 -----QVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLR 291
                Q L + Y   + ++  +E   N  ++ Y   L+ +     L R
Sbjct: 857 FEVNYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQR 904



 Score = 30.4 bits (67), Expect = 6.2
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 26/190 (13%)

Query: 2    EKSRMNLPKGP--DTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTA 59
            +K  M    GP    L  + ++ MKE  +V         + Q E++RDDL+   K L+  
Sbjct: 1979 QKEAMKAEAGPVEQQLLQETEKLMKEKLEV---------QCQAEKVRDDLQKQVKALEID 2029

Query: 60   MVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSK 119
            + E +++        +T L+ + +    L   L ++R+ +        + I    ER   
Sbjct: 2030 VEEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFL------DEQAIDREHERDVF 2083

Query: 120  QEDIRK--KKMCVLRLIQVI-----RSVEKIEKILNSQSSKETSALEASSPLLTGQILER 172
            Q++I+K  +++ V+   Q I     R VE++   L  ++ K  S L  S   L   I ER
Sbjct: 2084 QQEIQKLEQQLKVVPRFQPISEHQTREVEQLANHLKEKTDK-CSELLLSKEQLQRDIQER 2142

Query: 173  IATEFNQLQF 182
               E  +L+F
Sbjct: 2143 -NEEIEKLEF 2151


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 58/288 (20%), Positives = 131/288 (45%), Gaps = 42/288 (14%)

Query: 23  MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKL----LKTAMVELINKDYADFVNLSTNL 78
           +KED +++H       R+ +E+L+D+L ++YK     L+  M + I     +  NL T  
Sbjct: 640 LKEDLEIEH-------RINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITK- 691

Query: 79  VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDI----RKKKMCVLRLI 134
                  NQL + + +L++   SL +S SE +      + K+ +I     K+K  + + +
Sbjct: 692 ------QNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEV 745

Query: 135 QVIR-SVEKIEKILNSQSS---KETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGM 190
           Q ++   E +EK +  + +   ++ + LEA + +L  +  ++   +  ++     Q + +
Sbjct: 746 QELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDE--KKTLEDMLKIHTPVSQEERL 803

Query: 191 PLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVG-- 248
             LD ++ +     ++ ++ +E L+ E     + D+ + C++    I+K R+  +     
Sbjct: 804 IFLDSIKSK--SKDSVWEKEIEILIEE-----NEDLKQQCIQLNEEIEKQRNTFSFAEKN 856

Query: 249 -----QVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLR 291
                Q L + Y   + ++  +E   N  ++ Y   L+ +     L R
Sbjct: 857 FEVNYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQR 904



 Score = 34.3 bits (77), Expect = 0.43
 Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 27/220 (12%)

Query: 2    EKSRMNLPKGP--DTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTA 59
            +K  M    GP    L  + ++ MKE  +V         + Q E++RDDL+   K L+  
Sbjct: 1979 QKEAMKAEAGPVEQQLLQETEKLMKEKLEV---------QCQAEKVRDDLQKQVKALEID 2029

Query: 60   MVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSK 119
            + E +++        +T L+ + +    L   L ++R+ +        + I    ER   
Sbjct: 2030 VEEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFL------DEQAIDREHERDVF 2083

Query: 120  QEDIRK--KKMCVLRLIQVI-----RSVEKIEKILNSQSSKETSALEASSPLLTGQILER 172
            Q++I+K  +++ V+   Q I     R VE++   L  ++ K  S L  S   L   I ER
Sbjct: 2084 QQEIQKLEQQLKVVPRFQPISEHQTREVEQLANHLKEKTDK-CSELLLSKEQLQRDIQER 2142

Query: 173  IATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLE 212
               E  +L+F  V+     LL + R     + A  + SLE
Sbjct: 2143 -NEEIEKLEFR-VRELEQALLVEDRKHFGAVEAKPELSLE 2180


>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
           isoform 2 [Homo sapiens]
          Length = 2472

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 21/222 (9%)

Query: 16  CFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNL- 74
           C D   F ++   VD+++S     +  E+L D L+    LLK       ++D+   ++  
Sbjct: 466 CMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKK------HEDFEKSLSAQ 519

Query: 75  STNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLI 134
              +  +D+   +L        E+V + R ++     A+ ER  ++   R +      L 
Sbjct: 520 EEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRR---RAQLADSFHLQ 576

Query: 135 QVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATE----FNQLQFHAVQSKGM 190
           Q  R  ++++  +N +    T         L G++ +  A E     NQ +  A++  G 
Sbjct: 577 QFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQ 636

Query: 191 PLL-------DKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225
            L+       D+V  R+  + ++ ++ LE   L+G++  + +
Sbjct: 637 KLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREAN 678


>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
           isoform 1 [Homo sapiens]
          Length = 2477

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 21/222 (9%)

Query: 16  CFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNL- 74
           C D   F ++   VD+++S     +  E+L D L+    LLK       ++D+   ++  
Sbjct: 466 CMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKK------HEDFEKSLSAQ 519

Query: 75  STNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLI 134
              +  +D+   +L        E+V + R ++     A+ ER  ++   R +      L 
Sbjct: 520 EEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRR---RAQLADSFHLQ 576

Query: 135 QVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATE----FNQLQFHAVQSKGM 190
           Q  R  ++++  +N +    T         L G++ +  A E     NQ +  A++  G 
Sbjct: 577 QFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQ 636

Query: 191 PLL-------DKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225
            L+       D+V  R+  + ++ ++ LE   L+G++  + +
Sbjct: 637 KLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREAN 678


>gi|240849567 component of oligomeric golgi complex 5 isoform 3
           [Homo sapiens]
          Length = 823

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 21  EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           +F+ EDFDV  + S    +  + E    L      L   +   +   + D +  +T +  
Sbjct: 67  DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126

Query: 81  MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
           ++  L  +   +G L+  V  +++ + E    +  R ++   ++     + R+I+++   
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186

Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
           ++++  L   S + T A                A   N+L +    +   G+ +++    
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230

Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
            IA     ++   + LL +GL+T +   +   L+ +  +   +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274


>gi|240849537 component of oligomeric golgi complex 5 isoform 2
           [Homo sapiens]
          Length = 839

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 21  EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           +F+ EDFDV  + S    +  + E    L      L   +   +   + D +  +T +  
Sbjct: 67  DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126

Query: 81  MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
           ++  L  +   +G L+  V  +++ + E    +  R ++   ++     + R+I+++   
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186

Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
           ++++  L   S + T A                A   N+L +    +   G+ +++    
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230

Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
            IA     ++   + LL +GL+T +   +   L+ +  +   +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274


>gi|240849531 component of oligomeric golgi complex 5 isoform 1
           [Homo sapiens]
          Length = 860

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 21  EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           +F+ EDFDV  + S    +  + E    L      L   +   +   + D +  +T +  
Sbjct: 67  DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126

Query: 81  MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
           ++  L  +   +G L+  V  +++ + E    +  R ++   ++     + R+I+++   
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186

Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
           ++++  L   S + T A                A   N+L +    +   G+ +++    
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230

Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
            IA     ++   + LL +GL+T +   +   L+ +  +   +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274


>gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo
           sapiens]
          Length = 338

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)

Query: 19  KDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNL 78
           +  +M+ DFD         +R    ELR+D++      K   VE   K+  + +   TN 
Sbjct: 31  EQSWMENDFD--ELREAGFRRSNYSELREDIQT-----KGKKVENFEKNLEECITRITNT 83

Query: 79  VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQED 122
               K L +L     +LREE  SLRS   +    ++ER+S  ED
Sbjct: 84  EKCLKELMELKTKARELREECRSLRSRCDQ----LEERVSAMED 123


>gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo
           sapiens]
          Length = 338

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)

Query: 19  KDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNL 78
           +  +M+ DFD         +R    ELR+D++      K   VE   K+  + +   TN 
Sbjct: 31  EQSWMENDFD--ELREAGFRRSNYSELREDIQT-----KGKKVENFEKNLEECITRITNT 83

Query: 79  VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQED 122
               K L +L     +LREE  SLRS   +    ++ER+S  ED
Sbjct: 84  EKCLKELMELKTKARELREECRSLRSRCDQ----LEERVSAMED 123


>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
          Length = 4523

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 34/251 (13%)

Query: 20   DEFMKE--DFDVDHFVSDCRKRVQLEELRDDLELYYKLLKT---------AMVELINKDY 68
            D+F++   ++D +H   +C K V    L+D  E    L++T         A V  I K Y
Sbjct: 3256 DDFLQALINYDKEHIPENCLKVVNEHYLKDP-EFNPNLIRTKSFAAAGLCAWVINIIKFY 3314

Query: 69   ADFVNLSTNLVGMDKALNQLSVP---LGQLREEVLSLRSSVSEGI----RAVDERMSKQE 121
              + ++      + +A  +L+     L  +R++++ L  ++S       +A  E++  QE
Sbjct: 3315 EVYCDVEPKRQALAQANLELAAATEKLEAIRKKLVDLDRNLSRLTASFEKATAEKVRCQE 3374

Query: 122  DIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEAS---SPLLTGQILERIATEFN 178
            ++ +    +    ++++ +E  +KI   QS K   A E +     LLT   +  +     
Sbjct: 3375 EVNQTNKTIKLANRLVKELEA-KKIRWGQSIKSFEAQEKTLCGDVLLTAAFVSYVGPFTR 3433

Query: 179  QLQFHAVQSKGMPLLD-KVR-PRIAGIT--AMLQQSL-------EGLLLEGLQTSDVDII 227
            Q +   V  K +P L  KV  P   G+   +ML           EGL  + + T +  I+
Sbjct: 3434 QYRQELVHCKWVPFLQQKVSIPLTEGLDLISMLTDDATIAAWNNEGLPSDRMSTENAAIL 3493

Query: 228  RHCLRTYATID 238
             HC R    ID
Sbjct: 3494 THCERWPLVID 3504


>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
          Length = 2479

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)

Query: 500  SETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAAL----ED 555
            +E +  V+     L  ++  L K+ + L    EI + K+     K F +I   L    ED
Sbjct: 1624 AEMEQTVAEQDDSLSSLLVKLKKVSQDLERQREITELKV-----KEFENIKLQLQENHED 1678

Query: 556  SQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPL 615
                  A V  L  K + D S      LKS L+  +     N   PTT    +   LK  
Sbjct: 1679 EVKKVKAEVEDL--KYLLDQSQKESQCLKSELQAQK---EANSRAPTTTMRNLVERLKSQ 1733

Query: 616  FQLQSGHKDKLKQAIIQ-----------QWLEGTLSESTHKYYETVSD-----VLNSVKK 659
              L+   +  L +A+++           + +  T  +  H   + + D     +   V+ 
Sbjct: 1734 LALKEKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRHTRELKTQVED 1793

Query: 660  MEESLKRLKQARKTT 674
            + E+L +LK+A KT+
Sbjct: 1794 LNENLLKLKEALKTS 1808


>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)

Query: 34  SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
           ++ +KR  L      LE+  + L+   V   NK Y + +     L    + L        
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169

Query: 94  QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
           ++R+++ ++     + I+ V E + K+ +  +    +L++ + +R  ++ E+ L  Q  +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228

Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
           + + L         Q L+R+  +   ++  A  +K   L+ ++   I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270


>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
           sapiens]
          Length = 431

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)

Query: 34  SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
           ++ +KR  L      LE+  + L+   V   NK Y + +     L    + L        
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169

Query: 94  QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
           ++R+++ ++     + I+ V E + K+ +  +    +L++ + +R  ++ E+ L  Q  +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228

Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
           + + L         Q L+R+  +   ++  A  +K   L+ ++   I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270


>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
           sapiens]
          Length = 676

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)

Query: 34  SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
           ++ +KR  L      LE+  + L+   V   NK Y + +     L    + L        
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169

Query: 94  QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
           ++R+++ ++     + I+ V E + K+ +  +    +L++ + +R  ++ E+ L  Q  +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228

Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
           + + L         Q L+R+  +   ++  A  +K   L+ ++   I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270


>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
          Length = 2115

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 29/159 (18%)

Query: 41  QLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLR---E 97
           +LEELRD  E        ++   +++      +L T    MD+ +NQLS   G L     
Sbjct: 277 ELEELRDKNE--------SLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLR 328

Query: 98  EVLSLRSSVSEGIRAVDERMSK--QEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKET 155
           E  S    + + +  + E  SK  QE + K+               ++EK L S + ++ 
Sbjct: 329 EFASHLQQLQDALNELTEEHSKATQEWLEKQ--------------AQLEKEL-SAALQDK 373

Query: 156 SALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLD 194
             LE  + +L G+ L ++    +QLQ +  Q KG  L D
Sbjct: 374 KCLEEKNEILQGK-LSQLEEHLSQLQDNPPQEKGEVLGD 411


>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
           sapiens]
          Length = 395

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)

Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
           ED ++ F   +  L + K+++D SD           V +L+ +  KE P   S++ D   
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202

Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
           + + QLQ  H++K +       LE  L      Y E   ++ +  ++ME+ +K  K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249


>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
           sapiens]
          Length = 462

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)

Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
           ED ++ F   +  L + K+++D SD           V +L+ +  KE P   S++ D   
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202

Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
           + + QLQ  H++K +       LE  L      Y E   ++ +  ++ME+ +K  K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)

Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
           ED ++ F   +  L + K+++D SD           V +L+ +  KE P   S++ D   
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202

Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
           + + QLQ  H++K +       LE  L      Y E   ++ +  ++ME+ +K  K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249


>gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]
          Length = 979

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 607 YVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETV--SDVLNSVKKMEESL 664
           Y+++ L+ LF LQS   D LKQ I   W +  L+    ++   +   D+ NS  K ++ L
Sbjct: 351 YMNAILQSLFSLQSFANDLLKQGI--PWKKIPLNALIRRFAHLLVKKDICNSETK-KDLL 407

Query: 665 KRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKL 709
           K++K A   T       SG M +D    L   LD   L E ++KL
Sbjct: 408 KKVKNAISATAER---FSGYMQNDAHEFLSQCLD--QLKEDMEKL 447


>gi|112734867 retinitis pigmentosa GTPase regulator interacting
           protein 1 [Homo sapiens]
          Length = 1286

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 24/187 (12%)

Query: 9   PKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDY 68
           PK P+ + + KDE  ++   ++     C ++    ELR  ++   +L++  + +L+++  
Sbjct: 238 PKSPEKM-WPKDENFEQRSSLE-----CAQKAA--ELRASIKEKVELIR--LKKLLHERN 287

Query: 69  ADFVNLSTNLVGMDKAL------NQ--LSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
           A  V     L  + +A       NQ  LS     L ++V  LR+ + E  +      S+ 
Sbjct: 288 ASLVMTKAQLTEVQEAYETLLQKNQGILSAAHEALLKQVNELRAELKEESKKAVSLKSQL 347

Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSAL-----EASSPLLTGQIL-ERIA 174
           ED+   +M +    + +  +EK  K+LN    K   ++      +S P  + +++ E++ 
Sbjct: 348 EDVSILQMTLKEFQERVEDLEKERKLLNDNYDKLLESMLDSSDSSSQPHWSNELIAEQLQ 407

Query: 175 TEFNQLQ 181
            + +QLQ
Sbjct: 408 QQVSQLQ 414


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 459  NELSLRPISNESPKEIKKPLVTGSKEPSITQGNTEDQGSGPSETKPVVSISRTQLV---Y 515
            +EL L+ +  E  K+   P  T SK PS  + N      GPS         ++QL+    
Sbjct: 1131 SELPLKELGKEETKQKNMPSATISKAPSTPEPNKNHSKLGPSVPNKTEETGKSQLLSNHQ 1190

Query: 516  VVADLDKLQEQLPELLEIIKPKLEM 540
                 D  + +  E  ++IK  +EM
Sbjct: 1191 QQLQADSFKAKQMENHQLIKEAVEM 1215


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 14/116 (12%)

Query: 39   RVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREE 98
            R + E+L+++L       +    +L  K+  D+ +L   L    K + Q+   +  +R+E
Sbjct: 1214 RQETEKLKEELSASSARTQNLKADLQRKE-EDYADLKEKLTDAKKQIKQVQKEVSVMRDE 1272

Query: 99   VLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKE 154
               LR  ++E        + K     KK  C   L    R+++++++ LN+Q  +E
Sbjct: 1273 DKLLRIKINE--------LEK-----KKNQCSQELDMKQRTIQQLKEQLNNQKVEE 1315



 Score = 30.4 bits (67), Expect = 6.2
 Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 13/175 (7%)

Query: 37   RKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLR 96
            +K  Q+EEL   +E     +K    E       +  N        D  L +    + QL+
Sbjct: 1033 KKSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN-------QDDLLKEKETLIQQLK 1085

Query: 97   EEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK-ET 155
            EE+     ++   I+ V E      ++ +   C    I+ + ++ + +K+  S S+K E 
Sbjct: 1086 EELQEKNVTLDVQIQHVVEGKRALSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQ 1145

Query: 156  SALEASSPLLTGQILERIATEFNQ-LQFHAVQSKGMPLLD-KVRPRIAGITAMLQ 208
              LE  S +L    LER   EF + LQ     +K + + + K++  I  +T  LQ
Sbjct: 1146 DILEKESIILK---LERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQ 1197


>gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens]
          Length = 1491

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)

Query: 525  EQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPS------LSSKIIQDLSDS 578
            E+  ++ +I+    E++    F  + +  ED Q   S   P       +S   IQDLS  
Sbjct: 1121 EEKFQMRKILGKNAEILPRSQFQPVRST-EDEQEETSKESPKELKEKDISLTDIQDLSSI 1179

Query: 579  CF----GFLKSALEVPRL-YRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQ 633
             +     F +++ + P++ +  T+   P +  S   +A        S +KD L+    Q 
Sbjct: 1180 SYEPDSSFKEASCKTPKINHAPTSVSTPLSPGSVSSAA--------SQYKDCLESITFQV 1231

Query: 634  WLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVG 680
              E     ++ ++ +T+SD   SV++  + L  L  + +T P+   G
Sbjct: 1232 KTEFASCWNSQEFIQTLSDDFISVRERAKKLDSLLTSSETPPSRLTG 1278


>gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens]
          Length = 1451

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)

Query: 525  EQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPS------LSSKIIQDLSDS 578
            E+  ++ +I+    E++    F  + +  ED Q   S   P       +S   IQDLS  
Sbjct: 1081 EEKFQMRKILGKNAEILPRSQFQPVRST-EDEQEETSKESPKELKEKDISLTDIQDLSSI 1139

Query: 579  CF----GFLKSALEVPRL-YRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQ 633
             +     F +++ + P++ +  T+   P +  S   +A        S +KD L+    Q 
Sbjct: 1140 SYEPDSSFKEASCKTPKINHAPTSVSTPLSPGSVSSAA--------SQYKDCLESITFQV 1191

Query: 634  WLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVG 680
              E     ++ ++ +T+SD   SV++  + L  L  + +T P+   G
Sbjct: 1192 KTEFASCWNSQEFIQTLSDDFISVRERAKKLDSLLTSSETPPSRLTG 1238


>gi|47458820 signal transducer and activator of transcription 3
           isoform 3 [Homo sapiens]
          Length = 722

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)

Query: 29  VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           ++  + D RKRVQ        +E L+DD +  YK LK+           D  +L+ N   
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194

Query: 81  MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
           + +     L Q+   L Q+R  ++S  + +   +  V + ++ +E  D ++++       
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254

Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
              +C+ RL           +Q  + ++K+E++    S K    ++   P+L  +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311


>gi|21618338 signal transducer and activator of transcription 3
           isoform 2 [Homo sapiens]
          Length = 769

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)

Query: 29  VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           ++  + D RKRVQ        +E L+DD +  YK LK+           D  +L+ N   
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194

Query: 81  MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
           + +     L Q+   L Q+R  ++S  + +   +  V + ++ +E  D ++++       
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254

Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
              +C+ RL           +Q  + ++K+E++    S K    ++   P+L  +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311


>gi|21618340 signal transducer and activator of transcription 3
           isoform 1 [Homo sapiens]
          Length = 770

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)

Query: 29  VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
           ++  + D RKRVQ        +E L+DD +  YK LK+           D  +L+ N   
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194

Query: 81  MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
           + +     L Q+   L Q+R  ++S  + +   +  V + ++ +E  D ++++       
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254

Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
              +C+ RL           +Q  + ++K+E++    S K    ++   P+L  +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311


>gi|125628636 keratin 80 isoform a [Homo sapiens]
          Length = 452

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 24/194 (12%)

Query: 23  MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMD 82
           +K+D D     ++C  R +LE     LE + +L+KT + E   KD A  V   +  VGMD
Sbjct: 188 LKKDLD-----AECLHRTELETKLKSLESFVELMKT-IYEQELKDLAAQVKDVSVTVGMD 241

Query: 83  KALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEK 142
              ++  + L  + EEV +   +V+   R+++E  +      ++        Q  RS E 
Sbjct: 242 ---SRCHIDLSGIVEEVKAQYDAVA--ARSLEEAEAYSRSQLEE--------QAARSAEY 288

Query: 143 IEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQ--FHAVQSKGMPLLDKVRPRI 200
              + +S+S  E + L      L  QIL  + +   +L+      + +G       + ++
Sbjct: 289 GSSLQSSRS--EIADLNVRIQKLRSQILS-VKSHCLKLEENIKTAEEQGELAFQDAKTKL 345

Query: 201 AGITAMLQQSLEGL 214
           A + A LQQ+ + +
Sbjct: 346 AQLEAALQQAKQDM 359


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,881,676
Number of Sequences: 37866
Number of extensions: 1121336
Number of successful extensions: 4050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 3980
Number of HSP's gapped (non-prelim): 138
length of query: 738
length of database: 18,247,518
effective HSP length: 110
effective length of query: 628
effective length of database: 14,082,258
effective search space: 8843658024
effective search space used: 8843658024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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