Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 6678676
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6678676 component of oligomeric golgi complex 2 isoform 1
[Homo sapiens]
(738 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Ho... 1442 0.0
gi|223029519 component of oligomeric golgi complex 2 isoform 2 [... 1436 0.0
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 41 0.003
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 41 0.003
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 37 0.086
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... 37 0.086
gi|240849567 component of oligomeric golgi complex 5 isoform 3 [... 37 0.086
gi|240849537 component of oligomeric golgi complex 5 isoform 2 [... 37 0.086
gi|240849531 component of oligomeric golgi complex 5 isoform 1 [... 37 0.086
gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo ... 36 0.11
gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo ... 36 0.11
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens] 35 0.25
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 34 0.43
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 34 0.56
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap... 34 0.56
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 34 0.56
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 33 0.73
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa... 33 0.95
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s... 33 0.95
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 33 0.95
gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens] 33 0.95
gi|112734867 retinitis pigmentosa GTPase regulator interacting p... 32 1.6
gi|153945755 zinc finger protein 608 [Homo sapiens] 32 1.6
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 32 1.6
gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens] 32 1.6
gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens] 32 1.6
gi|47458820 signal transducer and activator of transcription 3 i... 32 2.1
gi|21618338 signal transducer and activator of transcription 3 i... 32 2.1
gi|21618340 signal transducer and activator of transcription 3 i... 32 2.1
gi|125628636 keratin 80 isoform a [Homo sapiens] 32 2.1
>gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Homo
sapiens]
Length = 738
Score = 1442 bits (3733), Expect = 0.0
Identities = 738/738 (100%), Positives = 738/738 (100%)
Query: 1 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
Sbjct: 1 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
Query: 61 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
Sbjct: 61 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
Sbjct: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
Query: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
Sbjct: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
Query: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
Sbjct: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
Query: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
Sbjct: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
Query: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
Sbjct: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
Query: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
Sbjct: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
Query: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM
Sbjct: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
Query: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600
IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV
Sbjct: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600
Query: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660
PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM
Sbjct: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660
Query: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720
EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS
Sbjct: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720
Query: 721 ALAELVAAAKDQATAEQP 738
ALAELVAAAKDQATAEQP
Sbjct: 721 ALAELVAAAKDQATAEQP 738
>gi|223029519 component of oligomeric golgi complex 2 isoform 2
[Homo sapiens]
Length = 737
Score = 1436 bits (3717), Expect = 0.0
Identities = 737/738 (99%), Positives = 737/738 (99%), Gaps = 1/738 (0%)
Query: 1 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
Sbjct: 1 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 60
Query: 61 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
Sbjct: 61 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
Sbjct: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 180
Query: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
Sbjct: 181 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 240
Query: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
Sbjct: 241 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 300
Query: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
Sbjct: 301 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 360
Query: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
Sbjct: 361 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 420
Query: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
Sbjct: 421 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 480
Query: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM
Sbjct: 481 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 540
Query: 541 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 600
IGFKNFSSIS ALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV
Sbjct: 541 IGFKNFSSIS-ALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 599
Query: 601 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 660
PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM
Sbjct: 600 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 659
Query: 661 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 720
EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS
Sbjct: 660 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 719
Query: 721 ALAELVAAAKDQATAEQP 738
ALAELVAAAKDQATAEQP
Sbjct: 720 ALAELVAAAKDQATAEQP 737
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 41.2 bits (95), Expect = 0.003
Identities = 58/288 (20%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 23 MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKL----LKTAMVELINKDYADFVNLSTNL 78
+KED +++H R+ +E+L+D+L ++YK L+ M + I + NL T
Sbjct: 640 LKEDLEIEH-------RINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITK- 691
Query: 79 VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDI----RKKKMCVLRLI 134
NQL + + +L++ SL +S SE + + K+ +I K+K + + +
Sbjct: 692 ------QNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEV 745
Query: 135 QVIR-SVEKIEKILNSQSS---KETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGM 190
Q ++ E +EK + + + ++ + LEA + +L + ++ + ++ Q + +
Sbjct: 746 QELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDE--KKTLEDMLKIHTPVSQEERL 803
Query: 191 PLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVG-- 248
LD ++ + ++ ++ +E L+ E + D+ + C++ I+K R+ +
Sbjct: 804 IFLDSIKSK--SKDSVWEKEIEILIEE-----NEDLKQQCIQLNEEIEKQRNTFSFAEKN 856
Query: 249 -----QVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLR 291
Q L + Y + ++ +E N ++ Y L+ + L R
Sbjct: 857 FEVNYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQR 904
Score = 30.4 bits (67), Expect = 6.2
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 2 EKSRMNLPKGP--DTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTA 59
+K M GP L + ++ MKE +V + Q E++RDDL+ K L+
Sbjct: 1979 QKEAMKAEAGPVEQQLLQETEKLMKEKLEV---------QCQAEKVRDDLQKQVKALEID 2029
Query: 60 MVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSK 119
+ E +++ +T L+ + + L L ++R+ + + I ER
Sbjct: 2030 VEEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFL------DEQAIDREHERDVF 2083
Query: 120 QEDIRK--KKMCVLRLIQVI-----RSVEKIEKILNSQSSKETSALEASSPLLTGQILER 172
Q++I+K +++ V+ Q I R VE++ L ++ K S L S L I ER
Sbjct: 2084 QQEIQKLEQQLKVVPRFQPISEHQTREVEQLANHLKEKTDK-CSELLLSKEQLQRDIQER 2142
Query: 173 IATEFNQLQF 182
E +L+F
Sbjct: 2143 -NEEIEKLEF 2151
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 41.2 bits (95), Expect = 0.003
Identities = 58/288 (20%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 23 MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKL----LKTAMVELINKDYADFVNLSTNL 78
+KED +++H R+ +E+L+D+L ++YK L+ M + I + NL T
Sbjct: 640 LKEDLEIEH-------RINIEKLKDNLGIHYKQQIDGLQNEMSQKIETMQFEKDNLITK- 691
Query: 79 VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDI----RKKKMCVLRLI 134
NQL + + +L++ SL +S SE + + K+ +I K+K + + +
Sbjct: 692 ------QNQLILEISKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEV 745
Query: 135 QVIR-SVEKIEKILNSQSS---KETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGM 190
Q ++ E +EK + + + ++ + LEA + +L + ++ + ++ Q + +
Sbjct: 746 QELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKDE--KKTLEDMLKIHTPVSQEERL 803
Query: 191 PLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVG-- 248
LD ++ + ++ ++ +E L+ E + D+ + C++ I+K R+ +
Sbjct: 804 IFLDSIKSK--SKDSVWEKEIEILIEE-----NEDLKQQCIQLNEEIEKQRNTFSFAEKN 856
Query: 249 -----QVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLR 291
Q L + Y + ++ +E N ++ Y L+ + L R
Sbjct: 857 FEVNYQELQEEYACLLKVKDDLEDSKNKQELEYKSKLKALNEELHLQR 904
Score = 34.3 bits (77), Expect = 0.43
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 2 EKSRMNLPKGP--DTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTA 59
+K M GP L + ++ MKE +V + Q E++RDDL+ K L+
Sbjct: 1979 QKEAMKAEAGPVEQQLLQETEKLMKEKLEV---------QCQAEKVRDDLQKQVKALEID 2029
Query: 60 MVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSK 119
+ E +++ +T L+ + + L L ++R+ + + I ER
Sbjct: 2030 VEEQVSRFIELEQEKNTELMDLRQQNQALEKQLEKMRKFL------DEQAIDREHERDVF 2083
Query: 120 QEDIRK--KKMCVLRLIQVI-----RSVEKIEKILNSQSSKETSALEASSPLLTGQILER 172
Q++I+K +++ V+ Q I R VE++ L ++ K S L S L I ER
Sbjct: 2084 QQEIQKLEQQLKVVPRFQPISEHQTREVEQLANHLKEKTDK-CSELLLSKEQLQRDIQER 2142
Query: 173 IATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLE 212
E +L+F V+ LL + R + A + SLE
Sbjct: 2143 -NEEIEKLEFR-VRELEQALLVEDRKHFGAVEAKPELSLE 2180
>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 2 [Homo sapiens]
Length = 2472
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 16 CFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNL- 74
C D F ++ VD+++S + E+L D L+ LLK ++D+ ++
Sbjct: 466 CMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKK------HEDFEKSLSAQ 519
Query: 75 STNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLI 134
+ +D+ +L E+V + R ++ A+ ER ++ R + L
Sbjct: 520 EEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRR---RAQLADSFHLQ 576
Query: 135 QVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATE----FNQLQFHAVQSKGM 190
Q R ++++ +N + T L G++ + A E NQ + A++ G
Sbjct: 577 QFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQ 636
Query: 191 PLL-------DKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225
L+ D+V R+ + ++ ++ LE L+G++ + +
Sbjct: 637 KLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREAN 678
>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
isoform 1 [Homo sapiens]
Length = 2477
Score = 36.6 bits (83), Expect = 0.086
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 16 CFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNL- 74
C D F ++ VD+++S + E+L D L+ LLK ++D+ ++
Sbjct: 466 CMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKK------HEDFEKSLSAQ 519
Query: 75 STNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLI 134
+ +D+ +L E+V + R ++ A+ ER ++ R + L
Sbjct: 520 EEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERAMRR---RAQLADSFHLQ 576
Query: 135 QVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATE----FNQLQFHAVQSKGM 190
Q R ++++ +N + T L G++ + A E NQ + A++ G
Sbjct: 577 QFFRDSDELKSWVNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQ 636
Query: 191 PLL-------DKVRPRIAGITAMLQQSLEGLLLEGLQTSDVD 225
L+ D+V R+ + ++ ++ LE L+G++ + +
Sbjct: 637 KLIDVNHYAKDEVAARMNEVISLWKKLLEATELKGIKLREAN 678
>gi|240849567 component of oligomeric golgi complex 5 isoform 3
[Homo sapiens]
Length = 823
Score = 36.6 bits (83), Expect = 0.086
Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)
Query: 21 EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
+F+ EDFDV + S + + E L L + + + D + +T +
Sbjct: 67 DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126
Query: 81 MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
++ L + +G L+ V +++ + E + R ++ ++ + R+I+++
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186
Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
++++ L S + T A A N+L + + G+ +++
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230
Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
IA ++ + LL +GL+T + + L+ + + +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274
>gi|240849537 component of oligomeric golgi complex 5 isoform 2
[Homo sapiens]
Length = 839
Score = 36.6 bits (83), Expect = 0.086
Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)
Query: 21 EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
+F+ EDFDV + S + + E L L + + + D + +T +
Sbjct: 67 DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126
Query: 81 MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
++ L + +G L+ V +++ + E + R ++ ++ + R+I+++
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186
Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
++++ L S + T A A N+L + + G+ +++
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230
Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
IA ++ + LL +GL+T + + L+ + + +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274
>gi|240849531 component of oligomeric golgi complex 5 isoform 1
[Homo sapiens]
Length = 860
Score = 36.6 bits (83), Expect = 0.086
Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)
Query: 21 EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
+F+ EDFDV + S + + E L L + + + D + +T +
Sbjct: 67 DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126
Query: 81 MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140
++ L + +G L+ V +++ + E + R ++ ++ + R+I+++
Sbjct: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186
Query: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198
++++ L S + T A A N+L + + G+ +++
Sbjct: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230
Query: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242
IA ++ + LL +GL+T + + L+ + + +D
Sbjct: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274
>gi|239748549 PREDICTED: hypothetical protein LOC100129791 [Homo
sapiens]
Length = 338
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 19 KDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNL 78
+ +M+ DFD +R ELR+D++ K VE K+ + + TN
Sbjct: 31 EQSWMENDFD--ELREAGFRRSNYSELREDIQT-----KGKKVENFEKNLEECITRITNT 83
Query: 79 VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQED 122
K L +L +LREE SLRS + ++ER+S ED
Sbjct: 84 EKCLKELMELKTKARELREECRSLRSRCDQ----LEERVSAMED 123
>gi|239742533 PREDICTED: hypothetical protein LOC100129791 [Homo
sapiens]
Length = 338
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 19 KDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNL 78
+ +M+ DFD +R ELR+D++ K VE K+ + + TN
Sbjct: 31 EQSWMENDFD--ELREAGFRRSNYSELREDIQT-----KGKKVENFEKNLEECITRITNT 83
Query: 79 VGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQED 122
K L +L +LREE SLRS + ++ER+S ED
Sbjct: 84 EKCLKELMELKTKARELREECRSLRSRCDQ----LEERVSAMED 123
>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
Length = 4523
Score = 35.0 bits (79), Expect = 0.25
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 34/251 (13%)
Query: 20 DEFMKE--DFDVDHFVSDCRKRVQLEELRDDLELYYKLLKT---------AMVELINKDY 68
D+F++ ++D +H +C K V L+D E L++T A V I K Y
Sbjct: 3256 DDFLQALINYDKEHIPENCLKVVNEHYLKDP-EFNPNLIRTKSFAAAGLCAWVINIIKFY 3314
Query: 69 ADFVNLSTNLVGMDKALNQLSVP---LGQLREEVLSLRSSVSEGI----RAVDERMSKQE 121
+ ++ + +A +L+ L +R++++ L ++S +A E++ QE
Sbjct: 3315 EVYCDVEPKRQALAQANLELAAATEKLEAIRKKLVDLDRNLSRLTASFEKATAEKVRCQE 3374
Query: 122 DIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEAS---SPLLTGQILERIATEFN 178
++ + + ++++ +E +KI QS K A E + LLT + +
Sbjct: 3375 EVNQTNKTIKLANRLVKELEA-KKIRWGQSIKSFEAQEKTLCGDVLLTAAFVSYVGPFTR 3433
Query: 179 QLQFHAVQSKGMPLLD-KVR-PRIAGIT--AMLQQSL-------EGLLLEGLQTSDVDII 227
Q + V K +P L KV P G+ +ML EGL + + T + I+
Sbjct: 3434 QYRQELVHCKWVPFLQQKVSIPLTEGLDLISMLTDDATIAAWNNEGLPSDRMSTENAAIL 3493
Query: 228 RHCLRTYATID 238
HC R ID
Sbjct: 3494 THCERWPLVID 3504
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 34.3 bits (77), Expect = 0.43
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 500 SETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAAL----ED 555
+E + V+ L ++ L K+ + L EI + K+ K F +I L ED
Sbjct: 1624 AEMEQTVAEQDDSLSSLLVKLKKVSQDLERQREITELKV-----KEFENIKLQLQENHED 1678
Query: 556 SQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPL 615
A V L K + D S LKS L+ + N PTT + LK
Sbjct: 1679 EVKKVKAEVEDL--KYLLDQSQKESQCLKSELQAQK---EANSRAPTTTMRNLVERLKSQ 1733
Query: 616 FQLQSGHKDKLKQAIIQ-----------QWLEGTLSESTHKYYETVSD-----VLNSVKK 659
L+ + L +A+++ + + T + H + + D + V+
Sbjct: 1734 LALKEKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRHTRELKTQVED 1793
Query: 660 MEESLKRLKQARKTT 674
+ E+L +LK+A KT+
Sbjct: 1794 LNENLLKLKEALKTS 1808
>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 33.9 bits (76), Expect = 0.56
Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 34 SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
++ +KR L LE+ + L+ V NK Y + + L + L
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169
Query: 94 QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
++R+++ ++ + I+ V E + K+ + + +L++ + +R ++ E+ L Q +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228
Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
+ + L Q L+R+ + ++ A +K L+ ++ I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270
>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
sapiens]
Length = 431
Score = 33.9 bits (76), Expect = 0.56
Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 34 SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
++ +KR L LE+ + L+ V NK Y + + L + L
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169
Query: 94 QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
++R+++ ++ + I+ V E + K+ + + +L++ + +R ++ E+ L Q +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228
Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
+ + L Q L+R+ + ++ A +K L+ ++ I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270
>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 33.9 bits (76), Expect = 0.56
Identities = 30/167 (17%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 34 SDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLG 93
++ +KR L LE+ + L+ V NK Y + + L + L
Sbjct: 110 NELKKRAYLARFLIKLEVPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTA 169
Query: 94 QLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK 153
++R+++ ++ + I+ V E + K+ + + +L++ + +R ++ E+ L Q +
Sbjct: 170 EIRKDISAMEEEKDQLIKRV-EHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQE 228
Query: 154 ETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRI 200
+ + L Q L+R+ + ++ A +K L+ ++ I
Sbjct: 229 QKNQL-----FHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEI 270
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 33.5 bits (75), Expect = 0.73
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 29/159 (18%)
Query: 41 QLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLR---E 97
+LEELRD E ++ +++ +L T MD+ +NQLS G L
Sbjct: 277 ELEELRDKNE--------SLTMRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLR 328
Query: 98 EVLSLRSSVSEGIRAVDERMSK--QEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKET 155
E S + + + + E SK QE + K+ ++EK L S + ++
Sbjct: 329 EFASHLQQLQDALNELTEEHSKATQEWLEKQ--------------AQLEKEL-SAALQDK 373
Query: 156 SALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLD 194
LE + +L G+ L ++ +QLQ + Q KG L D
Sbjct: 374 KCLEEKNEILQGK-LSQLEEHLSQLQDNPPQEKGEVLGD 411
>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
sapiens]
Length = 395
Score = 33.1 bits (74), Expect = 0.95
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
ED ++ F + L + K+++D SD V +L+ + KE P S++ D
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202
Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
+ + QLQ H++K + LE L Y E ++ + ++ME+ +K K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249
>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
sapiens]
Length = 462
Score = 33.1 bits (74), Expect = 0.95
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
ED ++ F + L + K+++D SD V +L+ + KE P S++ D
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202
Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
+ + QLQ H++K + LE L Y E ++ + ++ME+ +K K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 33.1 bits (74), Expect = 0.95
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 554 EDSQSSFSACVPSLSS-KIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSAL 612
ED ++ F + L + K+++D SD V +L+ + KE P S++ D
Sbjct: 154 EDEEAQFRMLMDRLGAQKVLEDESD-----------VKQLWLQLKKEEPHLLSNFEDFLT 202
Query: 613 KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQ 669
+ + QLQ H++K + LE L Y E ++ + ++ME+ +K K+
Sbjct: 203 RIISQLQEAHEEKNE-------LECALKRKIAAYDE---EIQHLYEEMEQQIKSEKE 249
>gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]
Length = 979
Score = 33.1 bits (74), Expect = 0.95
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 607 YVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETV--SDVLNSVKKMEESL 664
Y+++ L+ LF LQS D LKQ I W + L+ ++ + D+ NS K ++ L
Sbjct: 351 YMNAILQSLFSLQSFANDLLKQGI--PWKKIPLNALIRRFAHLLVKKDICNSETK-KDLL 407
Query: 665 KRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKL 709
K++K A T SG M +D L LD L E ++KL
Sbjct: 408 KKVKNAISATAER---FSGYMQNDAHEFLSQCLD--QLKEDMEKL 447
>gi|112734867 retinitis pigmentosa GTPase regulator interacting
protein 1 [Homo sapiens]
Length = 1286
Score = 32.3 bits (72), Expect = 1.6
Identities = 41/187 (21%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 9 PKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDY 68
PK P+ + + KDE ++ ++ C ++ ELR ++ +L++ + +L+++
Sbjct: 238 PKSPEKM-WPKDENFEQRSSLE-----CAQKAA--ELRASIKEKVELIR--LKKLLHERN 287
Query: 69 ADFVNLSTNLVGMDKAL------NQ--LSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 120
A V L + +A NQ LS L ++V LR+ + E + S+
Sbjct: 288 ASLVMTKAQLTEVQEAYETLLQKNQGILSAAHEALLKQVNELRAELKEESKKAVSLKSQL 347
Query: 121 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSAL-----EASSPLLTGQIL-ERIA 174
ED+ +M + + + +EK K+LN K ++ +S P + +++ E++
Sbjct: 348 EDVSILQMTLKEFQERVEDLEKERKLLNDNYDKLLESMLDSSDSSSQPHWSNELIAEQLQ 407
Query: 175 TEFNQLQ 181
+ +QLQ
Sbjct: 408 QQVSQLQ 414
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 32.3 bits (72), Expect = 1.6
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 459 NELSLRPISNESPKEIKKPLVTGSKEPSITQGNTEDQGSGPSETKPVVSISRTQLV---Y 515
+EL L+ + E K+ P T SK PS + N GPS ++QL+
Sbjct: 1131 SELPLKELGKEETKQKNMPSATISKAPSTPEPNKNHSKLGPSVPNKTEETGKSQLLSNHQ 1190
Query: 516 VVADLDKLQEQLPELLEIIKPKLEM 540
D + + E ++IK +EM
Sbjct: 1191 QQLQADSFKAKQMENHQLIKEAVEM 1215
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 32.3 bits (72), Expect = 1.6
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 39 RVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREE 98
R + E+L+++L + +L K+ D+ +L L K + Q+ + +R+E
Sbjct: 1214 RQETEKLKEELSASSARTQNLKADLQRKE-EDYADLKEKLTDAKKQIKQVQKEVSVMRDE 1272
Query: 99 VLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKE 154
LR ++E + K KK C L R+++++++ LN+Q +E
Sbjct: 1273 DKLLRIKINE--------LEK-----KKNQCSQELDMKQRTIQQLKEQLNNQKVEE 1315
Score = 30.4 bits (67), Expect = 6.2
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 37 RKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLR 96
+K Q+EEL +E +K E + N D L + + QL+
Sbjct: 1033 KKSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKN-------QDDLLKEKETLIQQLK 1085
Query: 97 EEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSK-ET 155
EE+ ++ I+ V E ++ + C I+ + ++ + +K+ S S+K E
Sbjct: 1086 EELQEKNVTLDVQIQHVVEGKRALSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQ 1145
Query: 156 SALEASSPLLTGQILERIATEFNQ-LQFHAVQSKGMPLLD-KVRPRIAGITAMLQ 208
LE S +L LER EF + LQ +K + + + K++ I +T LQ
Sbjct: 1146 DILEKESIILK---LERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQ 1197
>gi|57863263 testis expressed sequence 14 isoform a [Homo sapiens]
Length = 1491
Score = 32.3 bits (72), Expect = 1.6
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 525 EQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPS------LSSKIIQDLSDS 578
E+ ++ +I+ E++ F + + ED Q S P +S IQDLS
Sbjct: 1121 EEKFQMRKILGKNAEILPRSQFQPVRST-EDEQEETSKESPKELKEKDISLTDIQDLSSI 1179
Query: 579 CF----GFLKSALEVPRL-YRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQ 633
+ F +++ + P++ + T+ P + S +A S +KD L+ Q
Sbjct: 1180 SYEPDSSFKEASCKTPKINHAPTSVSTPLSPGSVSSAA--------SQYKDCLESITFQV 1231
Query: 634 WLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVG 680
E ++ ++ +T+SD SV++ + L L + +T P+ G
Sbjct: 1232 KTEFASCWNSQEFIQTLSDDFISVRERAKKLDSLLTSSETPPSRLTG 1278
>gi|57863261 testis expressed sequence 14 isoform b [Homo sapiens]
Length = 1451
Score = 32.3 bits (72), Expect = 1.6
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 525 EQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPS------LSSKIIQDLSDS 578
E+ ++ +I+ E++ F + + ED Q S P +S IQDLS
Sbjct: 1081 EEKFQMRKILGKNAEILPRSQFQPVRST-EDEQEETSKESPKELKEKDISLTDIQDLSSI 1139
Query: 579 CF----GFLKSALEVPRL-YRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQ 633
+ F +++ + P++ + T+ P + S +A S +KD L+ Q
Sbjct: 1140 SYEPDSSFKEASCKTPKINHAPTSVSTPLSPGSVSSAA--------SQYKDCLESITFQV 1191
Query: 634 WLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVG 680
E ++ ++ +T+SD SV++ + L L + +T P+ G
Sbjct: 1192 KTEFASCWNSQEFIQTLSDDFISVRERAKKLDSLLTSSETPPSRLTG 1238
>gi|47458820 signal transducer and activator of transcription 3
isoform 3 [Homo sapiens]
Length = 722
Score = 32.0 bits (71), Expect = 2.1
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)
Query: 29 VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
++ + D RKRVQ +E L+DD + YK LK+ D +L+ N
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194
Query: 81 MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
+ + L Q+ L Q+R ++S + + + V + ++ +E D ++++
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254
Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
+C+ RL +Q + ++K+E++ S K ++ P+L +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311
>gi|21618338 signal transducer and activator of transcription 3
isoform 2 [Homo sapiens]
Length = 769
Score = 32.0 bits (71), Expect = 2.1
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)
Query: 29 VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
++ + D RKRVQ +E L+DD + YK LK+ D +L+ N
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194
Query: 81 MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
+ + L Q+ L Q+R ++S + + + V + ++ +E D ++++
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254
Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
+C+ RL +Q + ++K+E++ S K ++ P+L +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311
>gi|21618340 signal transducer and activator of transcription 3
isoform 1 [Homo sapiens]
Length = 770
Score = 32.0 bits (71), Expect = 2.1
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 45/178 (25%)
Query: 29 VDHFVSDCRKRVQ--------LEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80
++ + D RKRVQ +E L+DD + YK LK+ D +L+ N
Sbjct: 144 LEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKS---------QGDMQDLNGNNQS 194
Query: 81 MDK----ALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQE--DIRKKK------- 127
+ + L Q+ L Q+R ++S + + + V + ++ +E D ++++
Sbjct: 195 VTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 254
Query: 128 ---MCVLRL-----------IQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILE 171
+C+ RL +Q + ++K+E++ S K ++ P+L +I+E
Sbjct: 255 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ-HRPMLEERIVE 311
>gi|125628636 keratin 80 isoform a [Homo sapiens]
Length = 452
Score = 32.0 bits (71), Expect = 2.1
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 23 MKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMD 82
+K+D D ++C R +LE LE + +L+KT + E KD A V + VGMD
Sbjct: 188 LKKDLD-----AECLHRTELETKLKSLESFVELMKT-IYEQELKDLAAQVKDVSVTVGMD 241
Query: 83 KALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEK 142
++ + L + EEV + +V+ R+++E + ++ Q RS E
Sbjct: 242 ---SRCHIDLSGIVEEVKAQYDAVA--ARSLEEAEAYSRSQLEE--------QAARSAEY 288
Query: 143 IEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQ--FHAVQSKGMPLLDKVRPRI 200
+ +S+S E + L L QIL + + +L+ + +G + ++
Sbjct: 289 GSSLQSSRS--EIADLNVRIQKLRSQILS-VKSHCLKLEENIKTAEEQGELAFQDAKTKL 345
Query: 201 AGITAMLQQSLEGL 214
A + A LQQ+ + +
Sbjct: 346 AQLEAALQQAKQDM 359
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,881,676
Number of Sequences: 37866
Number of extensions: 1121336
Number of successful extensions: 4050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 3980
Number of HSP's gapped (non-prelim): 138
length of query: 738
length of database: 18,247,518
effective HSP length: 110
effective length of query: 628
effective length of database: 14,082,258
effective search space: 8843658024
effective search space used: 8843658024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.