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Search of human proteins with 66773038
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66773038 cell division cycle 37 homolog (S. cerevisiae)-like
1 [Homo sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66773038 cell division cycle 37 homolog (S. cerevisiae)-like ... 695 0.0
gi|5901922 cell division cycle 37 protein [Homo sapiens] 223 2e-58
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 39 0.009
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 39 0.009
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 38 0.015
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 38 0.015
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 37 0.019
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 37 0.025
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 37 0.033
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 36 0.043
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 35 0.12
gi|13129124 caspase recruitment domain protein 14 isoform 1 [Hom... 35 0.12
gi|16507955 caspase recruitment domain protein 14 isoform 2 [Hom... 35 0.12
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.21
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.21
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 33 0.28
gi|14591902 RecQ protein-like [Homo sapiens] 33 0.36
gi|14591904 RecQ protein-like [Homo sapiens] 33 0.36
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 33 0.36
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 33 0.47
gi|170763479 MMS19 nucleotide excision repair homolog [Homo sapi... 32 0.62
gi|148664197 coiled-coil domain containing 40 [Homo sapiens] 32 0.62
gi|224458301 family with sequence similarity 186, member A [Homo... 32 0.81
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 32 0.81
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 32 0.81
gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens] 32 0.81
gi|221219020 NYD-SP11 protein [Homo sapiens] 32 1.1
>gi|66773038 cell division cycle 37 homolog (S. cerevisiae)-like 1
[Homo sapiens]
Length = 337
Score = 695 bits (1794), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MEQPWPPPGPWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEF 60
MEQPWPPPGPWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEF
Sbjct: 1 MEQPWPPPGPWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEF 60
Query: 61 VKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQR 120
VKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQR
Sbjct: 61 VKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQR 120
Query: 121 EKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR 180
EKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR
Sbjct: 121 EKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR 180
Query: 181 FLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGC 240
FLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGC
Sbjct: 181 FLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGC 240
Query: 241 FRLFFQKAKAEEEGYFEAFKNELEAFKSRVRLYSQSQSFQPMTVQNHVPHSGVGSIGLLE 300
FRLFFQKAKAEEEGYFEAFKNELEAFKSRVRLYSQSQSFQPMTVQNHVPHSGVGSIGLLE
Sbjct: 241 FRLFFQKAKAEEEGYFEAFKNELEAFKSRVRLYSQSQSFQPMTVQNHVPHSGVGSIGLLE 300
Query: 301 SLPQNPDYLQYSISTALCSLNSVVHKEDDEPKMMDTV 337
SLPQNPDYLQYSISTALCSLNSVVHKEDDEPKMMDTV
Sbjct: 301 SLPQNPDYLQYSISTALCSLNSVVHKEDDEPKMMDTV 337
>gi|5901922 cell division cycle 37 protein [Homo sapiens]
Length = 378
Score = 223 bits (567), Expect = 2e-58
Identities = 115/262 (43%), Positives = 164/262 (62%), Gaps = 14/262 (5%)
Query: 55 QKQKEFV-KSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQK 113
QK+KE + + CK +AE Q+KL L + + E +A+ +LR+ E W QK
Sbjct: 44 QKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERLQAEA--QQLRKEERSWEQK 101
Query: 114 EEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTED-----EDKSESFMQKYEQKIRH 168
E + ++EK W+ D +SKD F+KS +N K ED E K ++F++KYE++I+H
Sbjct: 102 LEEMRKKEKSMPWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKH 161
Query: 169 FGMLSRWDDSQRFLSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIME 228
FGML RWDDSQ++LSD+ +LVCEETA YL++WC LE E+K ALMEQ+AHQ +VMQFI+E
Sbjct: 162 FGMLRRWDDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILE 221
Query: 229 MAKNCNVDPRGCFRLFFQKAKAEEEGYFEAFKNELEAFKSRV------RLYSQSQSFQPM 282
+AK+ VDPR CFR FF K K + Y E F +ELEAFK RV R+ + ++
Sbjct: 222 LAKSLKVDPRACFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEE 281
Query: 283 TVQNHVPHSGVGSIGLLESLPQ 304
+ + G+ + + ESLP+
Sbjct: 282 ERKKRLGPGGLDPVEVYESLPE 303
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/155 (20%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTA---VSELRQRE 107
++AC ++K + + K + +K+ + + E L++ + Q V+++ +
Sbjct: 458 KMACLRKKH-ARWTAKIKAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLT 516
Query: 108 EEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKD-TEDEDKSESFMQKYEQKI 166
E +++E+A V +EKM + + ++ IN++K ++ E + + Q+Y++K
Sbjct: 517 TELKEEEKAFVNKEKMLMKELSKYEEIFVKETQINKEKEEELVEYLPQLQVAEQEYKEKR 576
Query: 167 RHFGMLSRWDDSQR----FLSDHPYLVCEETAKYL 197
R LS +QR L++H +L + ++Y+
Sbjct: 577 RKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYI 611
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/155 (20%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTA---VSELRQRE 107
++AC ++K + + K + +K+ + + E L++ + Q V+++ +
Sbjct: 458 KMACLRKKH-ARWTAKIKAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLT 516
Query: 108 EEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKD-TEDEDKSESFMQKYEQKI 166
E +++E+A V +EKM + + ++ IN++K ++ E + + Q+Y++K
Sbjct: 517 TELKEEEKAFVNKEKMLMKELSKYEEIFVKETQINKEKEEELVEYLPQLQVAEQEYKEKR 576
Query: 167 RHFGMLSRWDDSQR----FLSDHPYLVCEETAKYL 197
R LS +QR L++H +L + ++Y+
Sbjct: 577 RKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYI 611
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/155 (20%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTA---VSELRQRE 107
++AC ++K + + K + +K+ + + E L++ + Q V+++ +
Sbjct: 458 KMACLRKKH-ARWTAKIKAEIQAITEKIQNAEVRRIELLNETSFRQQEISGFVAQIEKLT 516
Query: 108 EEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKD-TEDEDKSESFMQKYEQKI 166
E +++E+A V +EKM + + ++ IN++K ++ E + + Q+Y++K
Sbjct: 517 TELKEEEKAFVNKEKMLMKELSKYEEIFVKETQINKEKEEELVEYLPQLQVAEQEYKEKR 576
Query: 167 RHFGMLSRWDDSQR----FLSDHPYLVCEETAKYL 197
R LS +QR L++H +L + ++Y+
Sbjct: 577 RKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYI 611
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 38.5 bits (88), Expect = 0.009
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQK-- 113
KQ+ + K+ A QK G + ES ++ + + +++RQ+EEE R++
Sbjct: 281 KQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLE 340
Query: 114 EEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLS 173
EE ++ E+ K + KR++ E E+K Q+ EQ I ++
Sbjct: 341 EEQRIKEER--------------KKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIIL 386
Query: 174 RWDDSQRFL 182
R D SQ+ +
Sbjct: 387 REDASQQLI 395
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 38.5 bits (88), Expect = 0.009
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQK-- 113
KQ+ + K+ A QK G + ES ++ + + +++RQ+EEE R++
Sbjct: 281 KQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLE 340
Query: 114 EEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLS 173
EE ++ E+ K + KR++ E E+K Q+ EQ I ++
Sbjct: 341 EEQRIKEER--------------KKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIIL 386
Query: 174 RWDDSQRFL 182
R D SQ+ +
Sbjct: 387 REDASQQLI 395
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 37.7 bits (86), Expect = 0.015
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSE------LRQREEE--WRQKEEALVQREKMC-- 124
QQ+L A + L AK Q V E L Q++EE WRQ+E+ Q EKMC
Sbjct: 257 QQQLQVEADRLGKELQSVSAKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQ 316
Query: 125 -LWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
L + K + +++ + K E EDK E +++ E+KIR
Sbjct: 317 ELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIR 363
Score = 35.8 bits (81), Expect = 0.056
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEW 110
E ++Q E ++ W E ++L + E L + K Q +++++EE+
Sbjct: 412 EKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKI 471
Query: 111 RQKEEALVQREKMCLWSTDAISK------DVFNKSFINQDKRKDTEDE-DKSESFMQKYE 163
+++EE + ++E+ W + + K + K + ++K + E++ + E MQ+ E
Sbjct: 472 QRQEEKIQEQEEK-TWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQRQE 530
Query: 164 QKIR 167
+K+R
Sbjct: 531 EKMR 534
Score = 33.1 bits (74), Expect = 0.36
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-WRQKE 114
+Q+E ++ W E ++ E + ++ K + +++++EEE WRQ+E
Sbjct: 336 EQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEE 395
Query: 115 EALVQREKM--CLWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ Q EK +W + ++ K I + + + E+K E MQ E+K+R
Sbjct: 396 KIREQEEKRQEKMWRQEKKMREQDEK--IREQEEEMWRQEEKIRELEEMMQDQEEKLR 451
Score = 32.0 bits (71), Expect = 0.81
Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 17/157 (10%)
Query: 50 IELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE 109
+E Q Q+E ++ E Q+ E + ++ K L+Q E+
Sbjct: 439 LEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKI 498
Query: 110 WRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTE-----DEDKS--------- 155
W Q+E+ Q EKM W + ++ K ++K ++ E E+K
Sbjct: 499 WEQEEKMWRQEEKM--WEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQE 556
Query: 156 -ESFMQKYEQKIRHFGMLSRWDDSQRFLSDHPYLVCE 191
E + K QK G R SQR + P L E
Sbjct: 557 LEERLGKLGQKAELLGGAGRESGSQRLPTLTPILQVE 593
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE- 109
E C+++ + ++ W E + + + ++ K + ++R++EE+
Sbjct: 311 EKMCEQELK-IREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKM 369
Query: 110 WRQKEEALVQREKMC-----LWSTDAISKDVFNK---SFINQDKRKDTEDED--KSESFM 159
WRQ+E+ Q EK+ +W + ++ K Q+K+ +DE + E M
Sbjct: 370 WRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEM 429
Query: 160 QKYEQKIR 167
+ E+KIR
Sbjct: 430 WRQEEKIR 437
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 37.7 bits (86), Expect = 0.015
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSE------LRQREEE--WRQKEEALVQREKMC-- 124
QQ+L A + L AK Q V E L Q++EE WRQ+E+ Q EKMC
Sbjct: 257 QQQLQVEADRLGKELQSVSAKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQ 316
Query: 125 -LWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
L + K + +++ + K E EDK E +++ E+KIR
Sbjct: 317 ELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIR 363
Score = 35.8 bits (81), Expect = 0.056
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEW 110
E ++Q E ++ W E ++L + E L + K Q +++++EE+
Sbjct: 412 EKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKI 471
Query: 111 RQKEEALVQREKMCLWSTDAISK------DVFNKSFINQDKRKDTEDE-DKSESFMQKYE 163
+++EE + ++E+ W + + K + K + ++K + E++ + E MQ+ E
Sbjct: 472 QRQEEKIQEQEEK-TWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEEKMQRQE 530
Query: 164 QKIR 167
+K+R
Sbjct: 531 EKMR 534
Score = 33.1 bits (74), Expect = 0.36
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-WRQKE 114
+Q+E ++ W E ++ E + ++ K + +++++EEE WRQ+E
Sbjct: 336 EQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEE 395
Query: 115 EALVQREKM--CLWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ Q EK +W + ++ K I + + + E+K E MQ E+K+R
Sbjct: 396 KIREQEEKRQEKMWRQEKKMREQDEK--IREQEEEMWRQEEKIRELEEMMQDQEEKLR 451
Score = 32.0 bits (71), Expect = 0.81
Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 17/157 (10%)
Query: 50 IELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE 109
+E Q Q+E ++ E Q+ E + ++ K L+Q E+
Sbjct: 439 LEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKI 498
Query: 110 WRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTE-----DEDKS--------- 155
W Q+E+ Q EKM W + ++ K ++K ++ E E+K
Sbjct: 499 WEQEEKMWRQEEKM--WEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQE 556
Query: 156 -ESFMQKYEQKIRHFGMLSRWDDSQRFLSDHPYLVCE 191
E + K QK G R SQR + P L E
Sbjct: 557 LEERLGKLGQKAELLGGAGRESGSQRLPTLTPILQVE 593
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE- 109
E C+++ + ++ W E + + + ++ K + ++R++EE+
Sbjct: 311 EKMCEQELK-IREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKM 369
Query: 110 WRQKEEALVQREKMC-----LWSTDAISKDVFNK---SFINQDKRKDTEDED--KSESFM 159
WRQ+E+ Q EK+ +W + ++ K Q+K+ +DE + E M
Sbjct: 370 WRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEM 429
Query: 160 QKYEQKIR 167
+ E+KIR
Sbjct: 430 WRQEEKIR 437
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 37.4 bits (85), Expect = 0.019
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 73 EAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-WRQKEEALVQREKMCLWSTDAI 131
E Q+ E + ++ K Q ++ ++EE+ W Q+EE +Q ++ +W +
Sbjct: 581 EKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEK 640
Query: 132 SKDVFNKSFINQDKRKDTEDE-DKSESFMQKYEQKIR 167
++ K + ++K ++ E++ + E MQ E+K+R
Sbjct: 641 MQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMR 677
Score = 35.4 bits (80), Expect = 0.073
Identities = 19/88 (21%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 83 LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFIN 142
+ E + + K + +R++EE+ +++EE + ++E+ +W + ++ K +
Sbjct: 556 MREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEK-MWEQEEKMQEQEEKMWEQ 614
Query: 143 QDKRKDTEDEDK---SESFMQKYEQKIR 167
++K + E+EDK E M + E+K++
Sbjct: 615 EEKMWEQEEEDKMQEQEEMMWEQEEKMQ 642
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+E ++ W E Q+ + +QE + + Q +EE ++
Sbjct: 584 QEQEEKMREQEEKMWEQEEKMQE------QEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQ 637
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDE-DKSESFMQKYEQKIR 167
E +Q ++ +W + ++ K ++K + E++ + E MQ E+K+R
Sbjct: 638 EEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMR 691
Score = 30.8 bits (68), Expect = 1.8
Identities = 21/118 (17%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
++Q++ ++ W E ++ E + ++ + + ELR++E+E R+++
Sbjct: 244 REQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQK 303
Query: 115 EALVQREKM-----CLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ Q E+M +W + ++ K + +++ + E + M++ EQK+R
Sbjct: 304 KLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQ------MREQEQKMR 355
Score = 30.8 bits (68), Expect = 1.8
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 87 ESLDQEHAKAQTAVSELRQREEE-WRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDK 145
E + ++ K Q ++R++EE+ W Q+E+ Q EK +W + K + +++
Sbjct: 574 EMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEK--MWEQE-------EKMWEQEEE 624
Query: 146 RKDTEDED---KSESFMQKYEQKI 166
K E E+ + E MQ+ E+K+
Sbjct: 625 DKMQEQEEMMWEQEEKMQEQEEKM 648
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-W--- 110
++Q+E ++ W E ++ E L ++ + + ++R +EE W
Sbjct: 306 REQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQD 365
Query: 111 ---RQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDED---KSESFMQKYEQ 164
R+KEE + ++EKM W + + + + I + ++K E+E+ + E MQK E+
Sbjct: 366 ERLREKEERMREQEKM--WEQE---EKMQEEERIREREKKMREEEETMREQEEKMQKQEE 420
Query: 165 KI 166
+
Sbjct: 421 NM 422
Score = 30.4 bits (67), Expect = 2.3
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKR 146
E + + K + +++E R+KEE + +++KM W + ++ K+ + K
Sbjct: 493 EKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKM--WQQEEKMREE-KKTQEQEKKT 549
Query: 147 KDTEDEDKSESFMQKYEQKIR 167
D E++ + E M++ E+K+R
Sbjct: 550 WDQEEKMREEERMREREKKMR 570
Score = 29.6 bits (65), Expect = 4.0
Identities = 22/114 (19%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q++++ ++ W E Q+ E + ++ K + +++ +EE+ R++E
Sbjct: 621 QEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQE 680
Query: 115 EALV-QREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
E + Q EKM + + K + ++K E++ + M++ E++IR
Sbjct: 681 EKMQGQEEKM--REQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIR 732
Score = 29.3 bits (64), Expect = 5.2
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 28/131 (21%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEW 110
E ++Q+E ++ W E + + L + +QE K Q ++ ++EE+
Sbjct: 405 EETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQE--KMQEQEEKIWEQEEKI 462
Query: 111 RQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDED-KSESFMQKYEQKIRHF 169
R +EE Q +KM W Q+K ++ ED+ + E M+ EQK+
Sbjct: 463 RDQEEMWGQEKKM--W---------------RQEKMREQEDQMWEQEEKMRDQEQKM--- 502
Query: 170 GMLSRWDDSQR 180
WD +R
Sbjct: 503 -----WDQEER 508
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 37.0 bits (84), Expect = 0.025
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
++Q+E ++ W ++K+ E QE + ++R++EE WRQKE
Sbjct: 487 REQEEKIREQEEKMWR---QEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKE 543
Query: 115 EALVQREKM-----CLWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKI 166
+ Q EK+ +W + D K I + + K E+K E +++ E+KI
Sbjct: 544 KIHEQEEKIRKQEEKMWRQEEKMHDQEEK--IREQEEKVWRQEEKIREQEEKIREQEEKI 601
Query: 167 RHFGMLSRWDDSQRFLSDHPYLVCEETAK 195
R +++ + + + + +CE+ K
Sbjct: 602 REQEEMTQ--EQEEKMGEQEEKMCEQEEK 628
Score = 33.5 bits (75), Expect = 0.28
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWST 128
WN QQ+ E + + K Q ++R++EE+ R++EE + ++E+M +W
Sbjct: 352 WNRLNQQQE--EKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEM-MWEK 408
Query: 129 DAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ + + ++K + + E M + E+KIR
Sbjct: 409 EEKMRRQEEMMWEKEEKMR------RQEEMMWEKEEKIR 441
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 73 EAQQKLGSLA--LHNSESLDQEHAKAQTA--VSELRQREEE----WRQKEEALVQREKMC 124
E ++K+ L +H E + ++ K Q + E +R+E+ WRQ+E+ Q EK+
Sbjct: 435 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI- 493
Query: 125 LWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ K + I++ ++ E++ + + M + E+KIR
Sbjct: 494 ---REQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIR 533
Score = 31.2 bits (69), Expect = 1.4
Identities = 17/98 (17%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 73 EAQQKLGSLA---LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTD 129
E ++K+G E + ++ K + ++R++E++ R++EE + ++E+M +
Sbjct: 610 EQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEE 669
Query: 130 AISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ + + Q+++ ++E + +EQ++R
Sbjct: 670 KMWEQ--EEKMCEQEEKMQEQEEKMRRQEEKMWEQEVR 705
Score = 29.3 bits (64), Expect = 5.2
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEAL-VQREKMCLWSTDAISK 133
QQ+L + A H + L AK Q V E +Q+EE + Q EK+ W K
Sbjct: 321 QQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWE----EK 376
Query: 134 DVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ I + + K E E+K E M + E+K+R
Sbjct: 377 IQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMR 413
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 36.6 bits (83), Expect = 0.033
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+E + W E Q+ E + ++ K + ++R++EE +++E
Sbjct: 407 QEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQE 466
Query: 115 EALVQRE-KMCLWST---DAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKI 166
E + ++E KMC + K + I + ++K E E+K E MQ+ E+K+
Sbjct: 467 EKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKM 525
Score = 35.8 bits (81), Expect = 0.056
Identities = 23/118 (19%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEAL------VQREK 122
WN QQ+ E + + K Q ++R++EE+ R++EE + ++R++
Sbjct: 279 WNRLNQQQE--EKMWRQEEKIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQE 336
Query: 123 MCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQR 180
+W + +++ K Q+K ++ E++ + E +++ E++ + R ++ R
Sbjct: 337 EMMWEKEEKIRELEEKMH-EQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIR 393
Score = 34.3 bits (77), Expect = 0.16
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 73 EAQQKLGSLA--LHNSESLDQEHAKAQTA--VSELRQREEE----WRQKEEALVQREKMC 124
E ++K+ L +H E + ++ K Q + E +R+E+ WRQ+E+ Q EK
Sbjct: 341 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK-- 398
Query: 125 LWSTDAISKDVFNKSFINQDKRKDTEDE-DKSESFMQKYEQKIR 167
+ + + ++ K ++K + E+E + E M++ E+KIR
Sbjct: 399 IREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIR 442
Score = 32.0 bits (71), Expect = 0.81
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 83 LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMC------LWSTDAISKDVF 136
+ E ++ AK ++R++EE+ R++EE + ++E+ +W + ++
Sbjct: 372 IREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQE 431
Query: 137 NK-----SFINQDKRKDTEDEDK---SESFMQKYEQKI 166
K I + ++K E E+K E MQ+ E+K+
Sbjct: 432 EKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKM 469
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 36.2 bits (82), Expect = 0.043
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 58 KEFVKSSVAC-KWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEA 116
K+FVK S K L Q++LG +E ++E K + R +EE ++KEE
Sbjct: 323 KKFVKGSTEKNKLRLQRDQERLGKQLKLRAEREEKEKLKEEAK----RAKEEAKKKKEEE 378
Query: 117 LVQREKMCLWSTDAISKDVFNKSFINQDKRKDTED--EDKSESFMQKYEQK 165
+EK + K+ K + +++RK+ ++ E K E +K E+K
Sbjct: 379 KELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEK 429
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 90 DQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDT 149
D++H K + +S+++ E+EW K+E ++R K +KD+ ++SF + R +
Sbjct: 690 DRDHFKKEEKLSKMKLEEKEWLFKDEKSLKRIK-------DTNKDI-SRSFREEKDRSNK 741
Query: 150 EDEDKSESFMQKYEQKIR 167
++++S E+K+R
Sbjct: 742 AEKERSLKEKSPKEEKLR 759
>gi|13129124 caspase recruitment domain protein 14 isoform 1 [Homo
sapiens]
Length = 1004
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREK 122
+Q L E +++ H+ + AV+ RQRE+ W +KE+ L+Q +K
Sbjct: 288 EQSLDEARGSRQELVERIHSLRERAVAAERQREQYWEEKEQTLLQFQK 335
>gi|16507955 caspase recruitment domain protein 14 isoform 2 [Homo
sapiens]
Length = 434
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREK 122
+Q L E +++ H+ + AV+ RQRE+ W +KE+ L+Q +K
Sbjct: 51 EQSLDEARGSRQELVERIHSLRERAVAAERQREQYWEEKEQTLLQFQK 98
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 33.9 bits (76), Expect = 0.21
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWST 128
WN QQ+ E + + K Q ++R++EE+ R++EE + ++E+M +W
Sbjct: 291 WNRLNQQQE--EKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEM-MWEK 347
Query: 129 DAISKDVFNKSFINQDKRKDTED-----EDK---SESFMQKYEQKIR 167
+ + + ++K + E+ E+K E M + E+KIR
Sbjct: 348 EEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIR 394
Score = 33.5 bits (75), Expect = 0.28
Identities = 26/131 (19%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
++Q+E ++ W ++K+ E QE + ++ ++EE WRQKE
Sbjct: 440 REQEEKIREQEKKMWR---QEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKE 496
Query: 115 EALVQREKM-----CLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHF 169
+ Q EK+ +W + ++ K ++K E++ + + M + E+K+
Sbjct: 497 KMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQ 556
Query: 170 GMLSRWDDSQR 180
+ W++ +R
Sbjct: 557 EKI--WEEEKR 565
Score = 32.3 bits (72), Expect = 0.62
Identities = 20/114 (17%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEE 115
+Q+E ++ W E ++ E + ++ K + +++++EE+ R++EE
Sbjct: 574 RQEEKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEE 633
Query: 116 ALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDED--KSESFMQKYEQKIR 167
+ ++E+M + + + + Q+++ ++E + E +++ E+KIR
Sbjct: 634 KIREQEEMTQEQEEKMGEQ--EEKMCEQEEKMQEQEETMWRQEEKIREQEKKIR 685
Score = 30.8 bits (68), Expect = 1.8
Identities = 22/126 (17%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+E ++ E ++ + E + ++ ++R++EE +KE
Sbjct: 317 QEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKE 376
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIRHFGMLSR 174
E + ++E+M +W + +++ K Q+K ++ E++ + E +++ E++ + R
Sbjct: 377 EKMRRQEEM-MWEKEEKIRELEEKMH-EQEKIREQEEKRQEEEKIREQEKRQEQEAKMWR 434
Query: 175 WDDSQR 180
++ R
Sbjct: 435 QEEKIR 440
Score = 29.6 bits (65), Expect = 4.0
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 73 EAQQKLGSLA--LHNSESLDQEHAKAQTA--VSELRQREEE----WRQKEEALVQREKMC 124
E ++K+ L +H E + ++ K Q + E +R+E+ WRQ+E+ Q EK+
Sbjct: 388 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI- 446
Query: 125 LWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKI 166
+ K + I++ ++ E++ + + M + E+KI
Sbjct: 447 ---REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKI 485
Score = 29.3 bits (64), Expect = 5.2
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEAL-VQREKMCLWSTDAISK 133
QQ+L + A H + L AK Q V E +Q+EE + Q EK+ W K
Sbjct: 260 QQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWE----EK 315
Query: 134 DVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ I + + K E E+K E M + E+K+R
Sbjct: 316 IQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMR 352
Score = 29.3 bits (64), Expect = 5.2
Identities = 15/81 (18%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKR 146
E++ ++ K + ++R++EE+ R++EE + ++E+ +W + + Q+++
Sbjct: 668 ETMWRQEEKIREQEKKIREQEEKIREQEEMMQEQEEK-MWEQE--------EKMCEQEEK 718
Query: 147 KDTEDEDKSESFMQKYEQKIR 167
++E + +EQ++R
Sbjct: 719 MQEQEEKMRRQEEKMWEQEVR 739
Score = 28.9 bits (63), Expect = 6.8
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWST 128
W E ++ E + ++ K Q ++ ++EE+ R++EE + ++E+
Sbjct: 573 WRQEEKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQE 632
Query: 129 DAISKD----VFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ I + + + + + K E E+K E M + E+KIR
Sbjct: 633 EKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQEEKIR 678
Score = 28.5 bits (62), Expect = 8.9
Identities = 22/114 (19%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 83 LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFIN 142
+H E + +E + + RQ E+ Q+E+ Q EK + + ++ K +
Sbjct: 553 MHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEK--IREQEEKRQEQEEKMWKQ 610
Query: 143 QDKRKDTEDE-DKSESFMQKYEQKIRHFGMLSRWDDSQRFLSDHPYLVCEETAK 195
++K ++ E++ + E +++ E+KIR +++ + + + + +CE+ K
Sbjct: 611 EEKIREQEEKIQEQEEKIREQEEKIREQEEMTQ--EQEEKMGEQEEKMCEQEEK 662
Score = 28.5 bits (62), Expect = 8.9
Identities = 21/115 (18%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
++Q+E + W E ++ E + ++ K + +++EE+ ++E
Sbjct: 594 REQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQE 653
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKI 166
E + ++E+ + + + + I + ++K E E+K E MQ+ E+K+
Sbjct: 654 EKMCEQEEKMQEQEETMWR---QEEKIREQEKKIREQEEKIREQEEMMQEQEEKM 705
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 33.9 bits (76), Expect = 0.21
Identities = 25/114 (21%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-WRQK 113
Q++K + + + + ++ E ++K+ E + ++ K Q +++++EEE W Q+
Sbjct: 699 QEKKTWDQEKMREEESMREREKKMRE----EEEMMREQEEKMQEQEEKMQEQEEEMWEQE 754
Query: 114 EEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
E+ Q EKM W + + + +K ++ E + E M+ E+K+R
Sbjct: 755 EKMWEQEEKM--WEQQRLPEQ--KEKLWEHEKMQEQEKIWEQEEKMRDQEEKMR 804
Score = 33.5 bits (75), Expect = 0.28
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEE-W--- 110
++Q+E ++ W E ++ E L ++ + + ++R +EE W
Sbjct: 344 REQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQD 403
Query: 111 ---RQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKR-KDTEDEDKSESFMQKYEQKI 166
R+KEE + ++EKM W + + K K Q+K+ +D E++ + E +++ E+K+
Sbjct: 404 ERLREKEERMREQEKM--W--EQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKM 459
Query: 167 R 167
R
Sbjct: 460 R 460
Score = 31.6 bits (70), Expect = 1.1
Identities = 22/118 (18%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
++Q++ ++ W E ++ E + ++ + + ELR++E+E R+++
Sbjct: 282 REQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQK 341
Query: 115 EALVQREKM-----CLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
E Q E+M +W + ++ K + +++ + E + M++ EQK+R
Sbjct: 342 ELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQ------MREQEQKMR 393
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+E ++ W E Q+ E + ++ K Q+E+ W +
Sbjct: 613 QEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLW--EH 670
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
E + ++EKM ++ K Q+K+ +++ + E M++ E+K+R
Sbjct: 671 EKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMR 723
Score = 30.0 bits (66), Expect = 3.1
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 51 ELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEW 110
E ++Q+E ++ W E + + L + +QE K Q ++ ++EE+
Sbjct: 463 EETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQE--KMQEQEEKIWEQEEKI 520
Query: 111 RQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTE-----DEDKSESFMQKYEQK 165
R +EE Q +KM W + + ++ ++ + ++K +D E E++ E Q+ E+K
Sbjct: 521 RDQEEMWGQEKKM--WRQEKM-REQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKK 577
Query: 166 IRHFGMLSRWDDSQR 180
WD ++
Sbjct: 578 --------TWDQEEK 584
Score = 28.5 bits (62), Expect = 8.9
Identities = 20/123 (16%), Positives = 54/123 (43%)
Query: 44 QMYSHGIELACQKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSEL 103
QM+ ++ Q+QK + + K + ++ E +E K E+
Sbjct: 545 QMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEM 604
Query: 104 RQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYE 163
+ +EE Q++E +Q ++ +W + ++ K + ++K + E++ + + + +
Sbjct: 605 MREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQK 664
Query: 164 QKI 166
+K+
Sbjct: 665 EKL 667
Score = 28.5 bits (62), Expect = 8.9
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 71 LAEAQQKLGSLA-LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEAL-VQREKMCLWST 128
L E ++KL + E + ++ K + ++R +EE+ R +EE + Q EKM W
Sbjct: 770 LPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKM--WGQ 827
Query: 129 DAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ K + ++K E+K E MQ E+K+R
Sbjct: 828 EEKMWGQEEKMWGQEEKM--WGQEEKMEEKMQGQEEKMR 864
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 33.5 bits (75), Expect = 0.28
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQK- 113
++Q+E ++ W ++K+ E QE + ++R++EE WRQK
Sbjct: 426 REQEEKIREQEKKMWR---QEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKE 482
Query: 114 ---EEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
E+ +++++ +W + D K I + + K E+K E +++ E+KIR
Sbjct: 483 KMHEQEKIRKQEEKVWRQEEKMHDQEEK--IREQEEKMWRQEEKIREQEEKIREQEEKIR 540
Score = 32.7 bits (73), Expect = 0.47
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWST 128
WN QQ+ E + + K Q ++R++EE+ R++EE + ++E+M +W
Sbjct: 291 WNRLNQQQE--EKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEM-MWEK 347
Query: 129 DAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ + + ++K + + E M + E+KIR
Sbjct: 348 EEKMRRQEEMMWEKEEKMR------RLEEMMWEKEEKIR 380
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 73 EAQQKLGSLA--LHNSESLDQEHAKAQTA--VSELRQREEE----WRQKEEALVQREKMC 124
E ++K+ L +H E + ++ K Q + E +R+E+ WRQ+E+ Q EK+
Sbjct: 374 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI- 432
Query: 125 LWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ K + I++ ++ E++ + + M + E+KIR
Sbjct: 433 ---REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIR 472
Score = 30.8 bits (68), Expect = 1.8
Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 83 LHNSES-LDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFI 141
+H+ E + ++ K ++R++EE+ R++EE + ++E+M + + +
Sbjct: 504 MHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGE-------- 555
Query: 142 NQDKRKDTEDEDKSESFMQKYEQKIR 167
++K ++ E + E +++ E+KIR
Sbjct: 556 QEEKMQEQEKMRRQEEKIREQEEKIR 581
Score = 29.3 bits (64), Expect = 5.2
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 75 QQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEAL-VQREKMCLWSTDAISK 133
QQ+L + A H + L AK Q V E +Q+EE + Q EK+ W K
Sbjct: 260 QQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWE----EK 315
Query: 134 DVFNKSFINQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ I + + K E E+K E M + E+K+R
Sbjct: 316 IQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMR 352
Score = 29.3 bits (64), Expect = 5.2
Identities = 16/97 (16%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 69 WNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWST 128
W E Q+ E + ++ K + ++R R+EE ++E ++R++ +W
Sbjct: 303 WRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMR-RQEEMMWEKEEKMRRQEEMMWEK 361
Query: 129 DAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQK 165
+ + + + ++K ++ E++ + +++ E+K
Sbjct: 362 EEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEK 398
Score = 28.9 bits (63), Expect = 6.8
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKM-----CLWSTDAISKDVFNKSFI 141
E + ++ K Q RQ E+ Q+E+ Q+EK+ +W + ++ + +
Sbjct: 551 EKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIRE--QEEMM 608
Query: 142 NQDKRKDTEDEDK---SESFMQKYEQKIR 167
+ + K E E+K E MQ+ E+K+R
Sbjct: 609 QEQEEKMWEQEEKMCEQEEKMQEQEEKMR 637
>gi|14591902 RecQ protein-like [Homo sapiens]
Length = 649
Score = 33.1 bits (74), Expect = 0.36
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKS 139
+S+ E + + EL +R++E QK++ L ++ K CL +DA + + ++ S
Sbjct: 12 DSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEYDSS 64
>gi|14591904 RecQ protein-like [Homo sapiens]
Length = 649
Score = 33.1 bits (74), Expect = 0.36
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKS 139
+S+ E + + EL +R++E QK++ L ++ K CL +DA + + ++ S
Sbjct: 12 DSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEYDSS 64
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 33.1 bits (74), Expect = 0.36
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 50 IELACQKQKEFVKSSVACKWNLAEAQQKLGSL---------------ALHNSESLDQEHA 94
++LA ++ ++ ++ V + AE +Q LG + +L +E L +EH
Sbjct: 892 LDLAAEQHRKHLEQCVQLRHLQAEVKQVLGWIRNGESMLNAGLITASSLQEAEQLQREHE 951
Query: 95 KAQTAVSELRQREEEWRQKEEALVQ 119
+ Q A+ + Q + +QK EA++Q
Sbjct: 952 QFQHAIEKTHQSALQVQQKAEAMLQ 976
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 32.7 bits (73), Expect = 0.47
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 56 KQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEE 115
K +E K+ C+ E ++KL H+S+ L E K Q +SEL + EE + + +
Sbjct: 393 KDEEITKTESQCR----ELRKKLQEEE-HHSKELRLEVEKLQKRMSELEKLEEAFSKSKS 447
Query: 116 ALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
Q + L ++KD+ N+ + + + K+ E SES ++K E ++
Sbjct: 448 ECTQLH-LNLEKEKNLTKDLLNELEVVKSRVKELE---CSESRLEKAELSLK 495
>gi|170763479 MMS19 nucleotide excision repair homolog [Homo
sapiens]
Length = 1030
Score = 32.3 bits (72), Expect = 0.62
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 182 LSDHPYLVCEETAKYLILWCFHLEAEKKGALMEQIAHQAVVMQFIMEMAKNCNVDPRGCF 241
+S HP +V +ET L+ HL +G ++ Q + V Q + +MA+ C DP C+
Sbjct: 562 VSTHPSIV-KETLPLLLQ---HLWQVNRGNMVAQSSDVIAVCQSLRQMAEKCQQDPESCW 617
>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
Length = 1142
Score = 32.3 bits (72), Expect = 0.62
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 36/221 (16%)
Query: 70 NLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE--------EALVQRE 121
NL E QQ L +H + L++ H + A SE RQ+EEE + A +R+
Sbjct: 330 NLYEVQQHL----VHLQKLLEKSHDRHAMASSERRQKEEELQAARALYTKTCAAANEERK 385
Query: 122 KMCLWSTDA--ISKDVFNKSFINQDKRKDTE---------DEDKSESFMQKYEQKIRHFG 170
K+ T+ ++ +F I+QD R D + ++ + ++K +Q +
Sbjct: 386 KLAALQTEMENLALHLFYMQNIDQDMRDDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQ 445
Query: 171 MLSRWDDSQR--FLSDHPYLVCEETAKYL----ILWCFHLEA--EKKGALMEQIAHQAVV 222
+ +R + L + YL E + L C ++A +K +M+Q A V
Sbjct: 446 LTTRAQQLEEDIALFEAQYLAQAEDTRILRKAVSEACTEIDAISVEKRRIMQQWASSLVG 505
Query: 223 MQFIMEMAKNCNVDPRGCFRLFFQKAKAEEEGYFEAFKNEL 263
M+ E + RGC Q +G EA+K +
Sbjct: 506 MKHRDEAHRAVLEALRGC-----QHQAKSTDGEIEAYKKSI 541
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 32.0 bits (71), Expect = 0.81
Identities = 28/134 (20%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+++++ ++ QQ LG +L +EH + +SE + ++ W Q +
Sbjct: 821 QRQEQYLQEGQEQMSGMSLKQQLLGE------RNLLKEHYEK---ISENWEEKKAWLQMK 871
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQ------DKRKDTEDEDKSESFMQKYE---QK 165
E +++ W + + K+ ++ Q K++ E+E+ +S +Q+ E QK
Sbjct: 872 EGKQEQQSQKQWQEEEMWKEEQKQATPKQAEQEEKQKQRGQEEEELPKSSLQRLEEGTQK 931
Query: 166 IRHFGMLSRWDDSQ 179
++ G+L ++ Q
Sbjct: 932 MKTQGLLLEKENGQ 945
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.81
Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 102 ELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDE-DKSESFMQ 160
E ++ +EE Q++E +Q ++ +W + ++ K + ++K ++ E++ + E MQ
Sbjct: 111 EKKKTQEEKMQEQEEKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQ 170
Query: 161 KYEQKIR 167
E+K+R
Sbjct: 171 GQEEKMR 177
Score = 29.6 bits (65), Expect = 4.0
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 87 ESLDQEHAKAQTAVSELRQREEE-WRQKEEALVQREKMC------------LWSTDAISK 133
E + ++ K Q ++R++EE+ W Q+E+ Q EKM +W + +
Sbjct: 19 EMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPE 78
Query: 134 DVFNKSFINQDKRKDTEDEDKSESFMQKYEQKIR 167
+ QD+R ++E E M + +K+R
Sbjct: 79 Q--KEKMWEQDERLREKEERMREQKMWQQVEKMR 110
Score = 29.3 bits (64), Expect = 5.2
Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
Q+Q+E ++ W E Q+ E + ++ K Q+E+ W Q E
Sbjct: 29 QEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKMWEQDE 88
Query: 115 EALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDE-DKSESFMQKYEQKIR 167
+ E+M + + K ++K ++ E++ + E M + E+K++
Sbjct: 89 RLREKEERMREQKMWQQVEKMREKKKTQEEKMQEQEEKMQEQEEMMWEQEEKMQ 142
Score = 28.9 bits (63), Expect = 6.8
Identities = 27/148 (18%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 83 LHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFIN 142
+ E + + K + +R++EE+ +++EE + ++E+ +W + ++ K +
Sbjct: 1 MREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEK-MWEQEEKMQEQEEKMWEQ 59
Query: 143 QDKRKDTEDEDKSESFMQKYEQKIRHFGMLSRWDDSQRFLSDHPYLVCEETAKYLILW-C 201
++K + E++ + + + ++K+ W+ +R EE + +W
Sbjct: 60 EEKMWEQEEKMWEQQRLPEQKEKM--------WEQDERLREK------EERMREQKMWQQ 105
Query: 202 FHLEAEKKGALMEQIAHQAVVMQFIMEM 229
EKK E++ Q MQ EM
Sbjct: 106 VEKMREKKKTQEEKMQEQEEKMQEQEEM 133
Score = 28.5 bits (62), Expect = 8.9
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 55 QKQKEFVKSSVACKWNLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKE 114
+K +E K+ E Q+ + E + ++ K ++R++EE+ R++E
Sbjct: 107 EKMREKKKTQEEKMQEQEEKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQE 166
Query: 115 EALV-QREKM 123
E + Q EKM
Sbjct: 167 EKMQGQEEKM 176
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 32.0 bits (71), Expect = 0.81
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 71 LAEAQQKLGSLALHNS---ESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWS 127
L E QQ+ SLA N+ E LDQ + Q ++R+ +W + + L RE W
Sbjct: 222 LEEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHRE--AAWR 279
Query: 128 TDAISKDVFNKSFINQDKR 146
+ ++ FN F N+ R
Sbjct: 280 RE---EESFNAYFSNEHSR 295
Score = 28.5 bits (62), Expect = 8.9
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 32/183 (17%)
Query: 10 PWSLPRAEGEAEEESDFDVFPSSPRCPQLPGGGAQMYSHGIELACQKQKEFVKSSVACKW 69
P S P + G A + D+ P + R G + + + A +++ E + A
Sbjct: 1484 PGSQPPSPGPATSPASPDLDPEAVR------GALREFLQELRSAQRERDELRTQTSALNR 1537
Query: 70 NLAEAQQKLGSLALHNSESLDQEHAKAQTA-----------VSELRQREEEWRQKEE--- 115
LAE + + S A + L + A+++ A +EL +EE R+ E
Sbjct: 1538 QLAEMEAERDS-ATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERR 1596
Query: 116 -----------ALVQREKMCLWSTDAISKDVFNKSFINQDKRKDTEDEDKSESFMQKYEQ 164
+L E S + ISK N++ + DKR+ E D SES K E
Sbjct: 1597 ATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLEL 1656
Query: 165 KIR 167
+ R
Sbjct: 1657 QRR 1659
>gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]
Length = 979
Score = 32.0 bits (71), Expect = 0.81
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 90 DQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTDAISKDVFNKSFINQDKRKDT 149
++E + Q A+++ Q +E W QKE+ ++R +S FN SF+ D
Sbjct: 805 EREEQELQQALAQSLQEQEAWEQKEDDDLKR-------ATELSLQEFNNSFV--DALGSD 855
Query: 150 EDEDKSESFMQKYEQ 164
ED + F +Y +
Sbjct: 856 EDSGNEDVFDMEYTE 870
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 87 ESLDQEHAKAQTAVSELRQREEEWRQKEEALV-------QREKMCLWSTDAISKD----- 134
+ L QE + + + EL +EEE Q+E LV + E+ W + +S++
Sbjct: 1712 KELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLA 1771
Query: 135 ------VFNKSFINQDKRKDTEDEDK-SESFMQKYEQKIRHFGMLSRWDDSQRFLSDHPY 187
+ K + Q K K E+E++ Q E+K++ RW +S L+ +
Sbjct: 1772 QEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKKMKLAQKRERWINSMEELTKNKM 1831
Query: 188 LVCEETAKYLILWCFHLEAEKKGALMEQ 215
++ ++ +L EKK E+
Sbjct: 1832 ILYQKK---------NLAQEKKNLAQEK 1850
Score = 30.8 bits (68), Expect = 1.8
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 70 NLAEAQQKLGSLALHNSESLDQEHAKAQTAVSELRQREEEWRQKEEALVQREKMCLWSTD 129
+L + +K SL+ E ++E + + E+R+ EEE +++EE EK
Sbjct: 2232 SLLDELEKQESLSSEEEEEREEEEEREE---EEVREEEEERKEEEEG---EEKQ------ 2279
Query: 130 AISKDVFNKSFINQDKRKDTEDEDKSESFMQKYE 163
+ K+ K ++K+K+ E ++K E F +K E
Sbjct: 2280 -VEKEEEEKKKKKKEKKKE-EVQEKEEVFEEKEE 2311
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,878,529
Number of Sequences: 37866
Number of extensions: 649057
Number of successful extensions: 3835
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 3260
Number of HSP's gapped (non-prelim): 404
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.