Search of human proteins with 6633798

Search of human proteins with 6633798

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6633798 BarH-like homeobox 2 [Homo sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6633798 BarH-like homeobox 2 [Homo sapiens]                        562   e-160
gi|153218470 BarH-like homeobox 1 [Homo sapiens]                      167   9e-42
gi|14149728 BarH-like homeobox 1 [Homo sapiens]                        92   4e-19
gi|39930383 BarH-like homeobox 2 [Homo sapiens]                        92   4e-19
gi|11386181 H2.0-like homeobox [Homo sapiens]                          91   1e-18
gi|147901462 brain specific homeobox [Homo sapiens]                    91   1e-18
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  87   1e-17
gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens]            87   2e-17
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  86   3e-17
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                86   3e-17
gi|226437602 NK1 homeobox 2 [Homo sapiens]                             85   8e-17
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  85   8e-17
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  85   8e-17
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  85   8e-17
gi|4758168 distal-less homeobox 2 [Homo sapiens]                       84   1e-16
gi|4885185 distal-less homeobox 3 [Homo sapiens]                       82   4e-16
gi|89257348 homeo box HB9 [Homo sapiens]                               82   4e-16
gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens]            82   7e-16
gi|24497513 homeobox A3 isoform a [Homo sapiens]                       82   7e-16
gi|13562112 homeobox A3 isoform a [Homo sapiens]                       82   7e-16
gi|4885187 distal-less homeobox 5 [Homo sapiens]                       81   9e-16
gi|24497515 homeobox A3 isoform b [Homo sapiens]                       80   2e-15
gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens]            80   2e-15
gi|82659115 distal-less homeobox 6 [Homo sapiens]                      80   3e-15
gi|24497538 homeobox C4 [Homo sapiens]                                 77   1e-14
gi|24497540 homeobox C4 [Homo sapiens]                                 77   1e-14
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]                   77   2e-14
gi|4502365 NK3 homeobox 2 [Homo sapiens]                               77   2e-14
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap...    77   2e-14
gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]              77   2e-14

>gi|6633798 BarH-like homeobox 2 [Homo sapiens]
          Length = 279

 Score =  562 bits (1449), Expect = e-160
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MHCHAELRLSSPGQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHS 60
           MHCHAELRLSSPGQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHS
Sbjct: 1   MHCHAELRLSSPGQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVVRPKPLHS 60

Query: 61  CTGSPSLRAYPLLSVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSE 120
           CTGSPSLRAYPLLSVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSE
Sbjct: 61  CTGSPSLRAYPLLSVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSE 120

Query: 121 SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 180
           SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW
Sbjct: 121 SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 180

Query: 181 YQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQ 240
           YQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQ
Sbjct: 181 YQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQ 240

Query: 241 EELCEAQEPKARDVPLEMAEPPDPPQELPIPSSEPPPLS 279
           EELCEAQEPKARDVPLEMAEPPDPPQELPIPSSEPPPLS
Sbjct: 241 EELCEAQEPKARDVPLEMAEPPDPPQELPIPSSEPPPLS 279


>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
          Length = 254

 Score =  167 bits (423), Expect = 9e-42
 Identities = 114/267 (42%), Positives = 147/267 (55%), Gaps = 47/267 (17%)

Query: 9   LSSPGQLKAAR------------RRYKTFMIDEILSKE----------TCDYFEKLSLYS 46
           +  PG+  AAR             RY++FMI+EIL++                 +L  + 
Sbjct: 1   MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60

Query: 47  VCPSLVVRPKPLHSCTGSPSLRA---YPLLSVITRQPTVISHLVPATPGIAQALSCH--- 100
           V   L  RP   H         A   +PL  +      + S L+ A PG+  A       
Sbjct: 61  VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSG--LSSALLAAGPGLPGAAGAPHLP 118

Query: 101 ---QVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKY 157
              Q+   + A  PG            +P  + KK RRSRT+FTELQLMGLEK+F+KQKY
Sbjct: 119 LELQLRGKLEAAGPG------------EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKY 166

Query: 158 LSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK-GGQEAPTKPKGRPKKNSIPTSE 216
           LSTPDR+DLA+SLGL+QLQVKTWYQNRRMKWKK+VL+ GG E+PTKPKGRPKKNSIPTSE
Sbjct: 167 LSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSE 226

Query: 217 EI-EAEEKMNSQAQGQEQLEPSQGQEE 242
           ++ E E   +++   +   EPS    E
Sbjct: 227 QLTEQERAKDAEKPAEVPGEPSDRSRE 253


>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
          Length = 327

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 43/75 (57%), Positives = 53/75 (70%)

Query: 121 SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 180
           S  + P  R KKPR++RT FT+ QL  LE+ F++QKYLS  DR++LA SL LT  QVKTW
Sbjct: 166 SSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTW 225

Query: 181 YQNRRMKWKKMVLKG 195
           YQNRR KWK+    G
Sbjct: 226 YQNRRTKWKRQTAVG 240


>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
          Length = 387

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 43/75 (57%), Positives = 53/75 (70%)

Query: 121 SETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTW 180
           S  E P  R KKPR++RT F++ QL  LE+ F++QKYLS  DR+DLA +L LT  QVKTW
Sbjct: 220 SSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTW 279

Query: 181 YQNRRMKWKKMVLKG 195
           YQNRR KWK+    G
Sbjct: 280 YQNRRTKWKRQTAVG 294


>gi|11386181 H2.0-like homeobox [Homo sapiens]
          Length = 488

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 13  GQLKAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLVV--RPKPLHSCTGSPSL-RA 69
           G   A   +   F ID ILS E     ++ +      SL+   RP  +H     PS  + 
Sbjct: 164 GSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQF 223

Query: 70  YPLLSVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPR 129
           +  L  I     ++S L        Q    HQ  +      PG  A+ + ++    P   
Sbjct: 224 FASLDPINEASAILSPLNSNPRNSVQ----HQFQDTF----PGPYAVLTKDT---MPQTY 272

Query: 130 QKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWK 189
           ++K   SR +F+ LQ  GLEK+F+ QKY++ PDR  LA  LGLT  QVK W+QNRRMKW+
Sbjct: 273 KRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR 332

Query: 190 KMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQ 240
                  Q+   K  G       P ++  E +E+  S+++G+ + E S  +
Sbjct: 333 HSKEAQAQKDKDKEAGEKPSGGAPAADG-EQDERSPSRSEGEAESESSDSE 382


>gi|147901462 brain specific homeobox [Homo sapiens]
          Length = 233

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 5/89 (5%)

Query: 134 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 193
           R++RT+F++ QL GLEK+F+ Q+YLSTP+R++LA +L L++ QVKTW+QNRRMK KK + 
Sbjct: 111 RKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLR 170

Query: 194 KGGQE-----APTKPKGRPKKNSIPTSEE 217
           K   E      P  P+G P+ +   T+ E
Sbjct: 171 KSQDEPKAPDGPESPEGSPRGSEAATAAE 199


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 56/140 (40%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 88  PATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPT-----PRQK---------KP 133
           P  P   Q     +    V+   PGG A       T Q T     P++K         KP
Sbjct: 38  PEPPSTRQRPPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKP 97

Query: 134 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVL 193
           RR+RT FT  QL+ LE KF+  +YLS  +RL+LA SL LT+ QVK W+QNRR KWKK   
Sbjct: 98  RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP 157

Query: 194 KGGQEAPTKPKGRPKKNSIP 213
                APT   G P   + P
Sbjct: 158 GADTSAPTGGGGGPGPGAGP 177


>gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens]
          Length = 240

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 31/182 (17%)

Query: 64  SPSLRAYPLLSVITRQPTVISH--LVPATPGIAQALSCHQ---VTEAVSAEAPGGEAL-A 117
           SP+  A P LS       ++S+    PA PG +  LSC Q   +++ +   A   + L A
Sbjct: 36  SPTTAASPNLSYSRPYGHLLSYPYTEPANPGDSY-LSCQQPAALSQPLCGPAEHPQELEA 94

Query: 118 SSESETEQPTPRQKKP-------RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSL 170
            SE     P P +++P       R+ RTI++ LQL  L ++FQ  +YL+ P+R  LA  L
Sbjct: 95  DSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQL 154

Query: 171 GLTQLQVKTWYQNRRMKWKKMVLK--GGQE----------APTKPK-----GRPKKNSIP 213
           GLTQ QVK W+QN+R K+KK++ +  GGQE          +P  P        PK  ++P
Sbjct: 155 GLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLP 214

Query: 214 TS 215
           TS
Sbjct: 215 TS 216


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 8/114 (7%)

Query: 108 AEAPGGEALASSESETEQPTPRQK--------KPRRSRTIFTELQLMGLEKKFQKQKYLS 159
           A APGG       + T     R++        KPRR+RT FT  QL+ LE KF+  +YLS
Sbjct: 629 AAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLS 688

Query: 160 TPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIP 213
             +RL+LA SL LT+ QVK W+QNRR KWKK        APT   G P   + P
Sbjct: 689 VCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGP 742


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 86.3 bits (212), Expect = 3e-17
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 8/114 (7%)

Query: 108 AEAPGGEALASSESETEQPTPRQK--------KPRRSRTIFTELQLMGLEKKFQKQKYLS 159
           A APGG       + T     R++        KPRR+RT FT  QL+ LE KF+  +YLS
Sbjct: 226 AAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATRYLS 285

Query: 160 TPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIP 213
             +RL+LA SL LT+ QVK W+QNRR KWKK        APT   G P   + P
Sbjct: 286 VCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGP 339


>gi|226437602 NK1 homeobox 2 [Homo sapiens]
          Length = 310

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 78  RQPTVISHLVPATPGIAQA--LSCHQVTEAVSAEAPGGEALASSESETEQPTPRQK---- 131
           R+P +        PG+A++       +      E  GG  + S       P PR++    
Sbjct: 99  RRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEP 158

Query: 132 ---KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188
              KPRR+RT FT  QL+ LE KF+  +YLS  +RL+LA SL LT+ QVK W+QNRR KW
Sbjct: 159 NCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 218

Query: 189 KK 190
           KK
Sbjct: 219 KK 220


>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 78  RQPTVISHLVPATPGIAQA--LSCHQVTEAVSAEAPGGEALASSESETEQPTPRQK---- 131
           R+P +        PG+A++       +      E  GG  + S       P PR++    
Sbjct: 121 RRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEP 180

Query: 132 ---KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188
              KPRR+RT FT  QL+ LE KF+  +YLS  +RL+LA SL LT+ QVK W+QNRR KW
Sbjct: 181 NCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 240

Query: 189 KK 190
           KK
Sbjct: 241 KK 242


>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 78  RQPTVISHLVPATPGIAQA--LSCHQVTEAVSAEAPGGEALASSESETEQPTPRQK---- 131
           R+P +        PG+A++       +      E  GG  + S       P PR++    
Sbjct: 121 RRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEP 180

Query: 132 ---KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188
              KPRR+RT FT  QL+ LE KF+  +YLS  +RL+LA SL LT+ QVK W+QNRR KW
Sbjct: 181 NCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 240

Query: 189 KK 190
           KK
Sbjct: 241 KK 242


>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)

Query: 78  RQPTVISHLVPATPGIAQA--LSCHQVTEAVSAEAPGGEALASSESETEQPTPRQK---- 131
           R+P +        PG+A++       +      E  GG  + S       P PR++    
Sbjct: 121 RRPRLRERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRRRLEP 180

Query: 132 ---KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW 188
              KPRR+RT FT  QL+ LE KF+  +YLS  +RL+LA SL LT+ QVK W+QNRR KW
Sbjct: 181 NCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 240

Query: 189 KK 190
           KK
Sbjct: 241 KK 242


>gi|4758168 distal-less homeobox 2 [Homo sapiens]
          Length = 328

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 9/102 (8%)

Query: 103 TEAVSAEAPGGEAL--ASSESETEQPTP-------RQKKPRRSRTIFTELQLMGLEKKFQ 153
           T A ++ AP G +   A++E E E   P       + KK R+ RTI++  QL  L+++FQ
Sbjct: 113 TAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQ 172

Query: 154 KQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKG 195
           K +YL+ P+R +LA SLGLTQ QVK W+QNRR K+KKM   G
Sbjct: 173 KTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSG 214


>gi|4885185 distal-less homeobox 3 [Homo sapiens]
          Length = 287

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 18/171 (10%)

Query: 120 ESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKT 179
           E+E      + KK R+ RTI++  QL  L+++FQK +YL+ P+R +LA  LGLTQ QVK 
Sbjct: 116 EAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 175

Query: 180 WYQNRRMKWKKMVLKGGQEAPTKPKGRPKKN-SIPTSEEIEAEEKMNSQAQGQEQLEPSQ 238
           W+QNRR K+KK+   G       P        + P S  +      ++ A  + QL P  
Sbjct: 176 WFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPARSQLPP-- 233

Query: 239 GQEELCEAQEPKARDVPL------------EMAEPPDPPQELPIPSSEPPP 277
               L  +  P   D P              + + P  P  L   S  PPP
Sbjct: 234 ---PLPYSASPSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHASPGPPP 281


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 62/165 (37%), Positives = 80/165 (48%), Gaps = 23/165 (13%)

Query: 132 KPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKW--- 188
           K RR RT FT  QL+ LE +F+  KYLS P R ++A SL LT+ QVK W+QNRRMKW   
Sbjct: 240 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 299

Query: 189 KKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQE----------QLEPSQ 238
           KK   +  QEA  K KG         +EE  AEE +   A G +            +P +
Sbjct: 300 KKAKEQAAQEA-EKQKGGGGGAGKGGAEEPGAEELLGPPAPGDKGSGRRLRDLRDSDPEE 358

Query: 239 GQEELCEAQEPKARDVPLEMA------EPPDPPQELPIPSSEPPP 277
            ++E  E   P +    +  A      E   PP   P PS +P P
Sbjct: 359 DEDEDDEDHFPYSNGASVHAASSDCSSEDDSPP---PRPSHQPAP 400


>gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens]
          Length = 255

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 109 EAPGGEALASSESETEQP--TPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDL 166
           E PG ++  S+  E  +     + KK R+ RTI++ LQL  L ++FQ+ +YL+ P+R +L
Sbjct: 102 EDPGADSEKSTVVEGGEVRFNGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAEL 161

Query: 167 AQSLGLTQLQVKTWYQNRRMKWKKMVLKGG 196
           A SLGLTQ QVK W+QN+R K+KK++ +GG
Sbjct: 162 AASLGLTQTQVKIWFQNKRSKFKKLMKQGG 191


>gi|24497513 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 74  SVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPRQKKP 133
           S +   PTV   + P            Q T+  ++ +  GE+ A  +S      P Q   
Sbjct: 143 SPLLNSPTVAKQIFPWMK------ESRQNTKQKTSSSSSGESCAGDKSP-----PGQASS 191

Query: 134 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKK--- 190
           +R+RT +T  QL+ LEK+F   +YL  P R+++A  L LT+ Q+K W+QNRRMK+KK   
Sbjct: 192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 251

Query: 191 ---MVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQEELCEAQ 247
              M+   G ++P++    P       S                   +P QG   L  A 
Sbjct: 252 GKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPAS 311

Query: 248 EPKARDVPLEMAEPPDPPQE 267
            P +    L    PP PPQ+
Sbjct: 312 YPAS----LPSCAPPPPPQK 327


>gi|13562112 homeobox A3 isoform a [Homo sapiens]
          Length = 443

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 74  SVITRQPTVISHLVPATPGIAQALSCHQVTEAVSAEAPGGEALASSESETEQPTPRQKKP 133
           S +   PTV   + P            Q T+  ++ +  GE+ A  +S      P Q   
Sbjct: 143 SPLLNSPTVAKQIFPWMK------ESRQNTKQKTSSSSSGESCAGDKSP-----PGQASS 191

Query: 134 RRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKK--- 190
           +R+RT +T  QL+ LEK+F   +YL  P R+++A  L LT+ Q+K W+QNRRMK+KK   
Sbjct: 192 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 251

Query: 191 ---MVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQEELCEAQ 247
              M+   G ++P++    P       S                   +P QG   L  A 
Sbjct: 252 GKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPAS 311

Query: 248 EPKARDVPLEMAEPPDPPQE 267
            P +    L    PP PPQ+
Sbjct: 312 YPAS----LPSCAPPPPPQK 327


>gi|4885187 distal-less homeobox 5 [Homo sapiens]
          Length = 289

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 119 SESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVK 178
           +E E      + KK R+ RTI++  QL  L+++FQK +YL+ P+R +LA SLGLTQ QVK
Sbjct: 123 TEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVK 182

Query: 179 TWYQNRRMKWKKMVLKGGQEAP 200
            W+QN+R K KK ++K G+  P
Sbjct: 183 IWFQNKRSKIKK-IMKNGEMPP 203


>gi|24497515 homeobox A3 isoform b [Homo sapiens]
          Length = 285

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 15/173 (8%)

Query: 101 QVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLST 160
           Q T+  ++ +  GE+ A  +S      P Q   +R+RT +T  QL+ LEK+F   +YL  
Sbjct: 6   QNTKQKTSSSSSGESCAGDKSP-----PGQASSKRARTAYTSAQLVELEKEFHFNRYLCR 60

Query: 161 PDRLDLAQSLGLTQLQVKTWYQNRRMKWKK------MVLKGGQEAPTKPKGRPKKNSIPT 214
           P R+++A  L LT+ Q+K W+QNRRMK+KK      M+   G ++P++    P       
Sbjct: 61  PRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLN 120

Query: 215 SEEIEAEEKMNSQAQGQEQLEPSQGQEELCEAQEPKARDVPLEMAEPPDPPQE 267
           S                   +P QG   L  A  P +    L    PP PPQ+
Sbjct: 121 SMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPASYPAS----LPSCAPPPPPQK 169


>gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens]
          Length = 168

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 17/115 (14%)

Query: 118 SSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQV 177
           S E    +P    KK R+ RTI++ LQL  L ++FQ  +YL+ P+R  LA  LGLTQ QV
Sbjct: 30  SPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQV 89

Query: 178 KTWYQNRRMKWKKMVLK--GGQE----------APTKPK-----GRPKKNSIPTS 215
           K W+QN+R K+KK++ +  GGQE          +P  P        PK  ++PTS
Sbjct: 90  KIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLPTS 144


>gi|82659115 distal-less homeobox 6 [Homo sapiens]
          Length = 265

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 5/98 (5%)

Query: 131 KKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKK 190
           KK R+ RTI++ LQL  L  +FQ+ +YL+ P+R +LA SLGLTQ QVK W+QN+R K+KK
Sbjct: 137 KKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK 196

Query: 191 MVLKGGQEAPTKPKG-----RPKKNSIPTSEEIEAEEK 223
           ++ +G     + P        P+  ++P   ++ A  K
Sbjct: 197 LLKQGSNPHESDPLQGSAALSPRSPALPPVWDVSASAK 234


>gi|24497538 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 21/214 (9%)

Query: 44  LYSVCPSLVVRPKPLHSCT---GSPSLRAYPLLSVITRQPTVISHLVPATPGIAQALSCH 100
           LY   P     P+  +SCT   G  + R +         P     L    P    + S  
Sbjct: 52  LYPPPPPRPSYPERQYSCTSLQGPGNSRGHGPAQAGHHHPEKSQSLCEPAPLSGASASPS 111

Query: 101 QVTEAVSAEAPGGEALASSES------------ETEQPTPRQKKPRRSRTIFTELQLMGL 148
               A S  AP   + A+S+              T  P     +P+RSRT +T  Q++ L
Sbjct: 112 PAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLEL 171

Query: 149 EKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPK 208
           EK+F   +YL+   R+++A SL L++ Q+K W+QNRRMKWK    K  +   TK +  P 
Sbjct: 172 EKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK----KDHRLPNTKVRSAPP 227

Query: 209 KNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQEE 242
             + P++  + A     S+   Q    P Q + E
Sbjct: 228 AGAAPST--LSAATPGTSEDHSQSATPPEQQRAE 259


>gi|24497540 homeobox C4 [Homo sapiens]
          Length = 264

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 21/214 (9%)

Query: 44  LYSVCPSLVVRPKPLHSCT---GSPSLRAYPLLSVITRQPTVISHLVPATPGIAQALSCH 100
           LY   P     P+  +SCT   G  + R +         P     L    P    + S  
Sbjct: 52  LYPPPPPRPSYPERQYSCTSLQGPGNSRGHGPAQAGHHHPEKSQSLCEPAPLSGASASPS 111

Query: 101 QVTEAVSAEAPGGEALASSES------------ETEQPTPRQKKPRRSRTIFTELQLMGL 148
               A S  AP   + A+S+              T  P     +P+RSRT +T  Q++ L
Sbjct: 112 PAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLEL 171

Query: 149 EKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPK 208
           EK+F   +YL+   R+++A SL L++ Q+K W+QNRRMKWK    K  +   TK +  P 
Sbjct: 172 EKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK----KDHRLPNTKVRSAPP 227

Query: 209 KNSIPTSEEIEAEEKMNSQAQGQEQLEPSQGQEE 242
             + P++  + A     S+   Q    P Q + E
Sbjct: 228 AGAAPST--LSAATPGTSEDHSQSATPPEQQRAE 259


>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
          Length = 330

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 9/100 (9%)

Query: 128 PRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMK 187
           P++KKPR S   FT LQ+  LEK+F +QKYL++ +R  LA++L +T  QVKTW+QNRR K
Sbjct: 199 PKKKKPRTS---FTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTK 255

Query: 188 WKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQ 227
           W++      Q A  +   R + N I    + EA +K  +Q
Sbjct: 256 WRR------QTAEEREAERQQANRILLQLQQEAFQKSLAQ 289


>gi|4502365 NK3 homeobox 2 [Homo sapiens]
          Length = 333

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 37/79 (46%), Positives = 50/79 (63%)

Query: 112 GGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLG 171
           GG   A    E E+P   + + +RSR  F+  Q+  LE++F  Q+YLS P+R DLA SL 
Sbjct: 185 GGSGPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLK 244

Query: 172 LTQLQVKTWYQNRRMKWKK 190
           LT+ QVK W+QNRR K K+
Sbjct: 245 LTETQVKIWFQNRRYKTKR 263


>gi|148746211 NK2 transcription factor related, locus 3 [Homo
           sapiens]
          Length = 364

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 11/105 (10%)

Query: 113 GEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGL 172
           G+  A+ ESE  +P PR +  R+ R +F++ Q+  LE++F++Q+YLS P+R  LA SL L
Sbjct: 132 GDCKAAEESE--RPKPRSR--RKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKL 187

Query: 173 TQLQVKTWYQNRRMKWKKM----VLKGGQEAPTKPKGRPKKNSIP 213
           T  QVK W+QNRR K K+      L+ G  AP  P   P++ ++P
Sbjct: 188 TSTQVKIWFQNRRYKCKRQRQDKSLELGAHAPPPP---PRRVAVP 229


>gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]
          Length = 348

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 104 EAVSAEAPGGEALASS--ESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTP 161
           +A   E   G AL  +   S     T    K RR RT FT  QL+ LEK+F  +KYLS  
Sbjct: 216 QAAHKEEDPGHALEETPPSSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLT 275

Query: 162 DRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAE 221
           +R  +A +L L+++QVK W+QNRR KWK+ V  G   + T    R  K  +P    + + 
Sbjct: 276 ERSQIAHALKLSEVQVKIWFQNRRAKWKR-VKAGNANSKTGEPSRNPKIVVPIPVHV-SR 333

Query: 222 EKMNSQAQGQEQLEP 236
             + SQ Q  EQ  P
Sbjct: 334 FAIRSQHQQLEQARP 348


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.128    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,364,449
Number of Sequences: 37866
Number of extensions: 722376
Number of successful extensions: 6710
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 5146
Number of HSP's gapped (non-prelim): 1704
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.