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Search of human proteins with 6631075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6631075 BCL2-associated athanogene 4 [Homo sapiens]
(457 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6631075 BCL2-associated athanogene 4 [Homo sapiens] 980 0.0
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 103 4e-22
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 66 6e-11
gi|62548856 BCL2-associated athanogene 5 isoform a [Homo sapiens] 65 1e-10
gi|6631077 BCL2-associated athanogene 5 isoform b [Homo sapiens] 65 1e-10
gi|62548854 BCL2-associated athanogene 5 isoform b [Homo sapiens] 65 1e-10
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 62 8e-10
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 62 1e-09
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 57 3e-08
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 57 3e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 57 3e-08
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 55 1e-07
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 55 1e-07
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 55 1e-07
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 55 1e-07
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s... 55 1e-07
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 55 1e-07
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 55 1e-07
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 54 2e-07
gi|55750053 atrophin-1 [Homo sapiens] 52 1e-06
gi|55750041 atrophin-1 [Homo sapiens] 52 1e-06
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 51 2e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 51 2e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 51 2e-06
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 50 3e-06
>gi|6631075 BCL2-associated athanogene 4 [Homo sapiens]
Length = 457
Score = 980 bits (2533), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MSALRRSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAET 60
MSALRRSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAET
Sbjct: 1 MSALRRSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAET 60
Query: 61 TWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVR 120
TWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVR
Sbjct: 61 TWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVR 120
Query: 121 PELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSP 180
PELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSP
Sbjct: 121 PELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSP 180
Query: 181 TPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQE 240
TPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQE
Sbjct: 181 TPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQE 240
Query: 241 DAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSY 300
DAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSY
Sbjct: 241 DAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSY 300
Query: 301 PYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPNNQD 360
PYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPNNQD
Sbjct: 301 PYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPNNQD 360
Query: 361 QSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKEL 420
QSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKEL
Sbjct: 361 QSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKEL 420
Query: 421 LELDSVETGGQDSVRQARKEAVCKIQAILEKLEKKGL 457
LELDSVETGGQDSVRQARKEAVCKIQAILEKLEKKGL
Sbjct: 421 LELDSVETGGQDSVRQARKEAVCKIQAILEKLEKKGL 457
>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
Length = 575
Score = 103 bits (256), Expect = 4e-22
Identities = 132/488 (27%), Positives = 186/488 (38%), Gaps = 64/488 (13%)
Query: 23 PGGGDVPVHPPPPLYPLRPEPPQPPISW---RVRGGGPAETTWLGEGGGGDG-------- 71
P G ++ + P +P + +W RV GP ET G +G
Sbjct: 23 PPGWEIKIDPQTG-WPFFVDHNSRTTTWNDPRVPSEGPKETPSSANGPSREGSRLPPARE 81
Query: 72 ---YYPS--GGAWPEPGRAGGSHQEQPP----YPSYNSNYWNSTARSRAPYPSTYPVR-- 120
YP G P P G+ Q YP + + A + AP S P+R
Sbjct: 82 GHPVYPQLRPGYIPIPVLHEGAENRQVHPFHVYPQPGMQRFRTEAAAAAPQRSQSPLRGM 141
Query: 121 PELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSS---- 176
PE A PP S S A A + +S S +PS+ RSS
Sbjct: 142 PETTQPDKQCGQVAAAAAAQPPASHGPERSQSPA--ASDCSSSSSSASLPSSGRSSLGSH 199
Query: 177 ----GNSPTPVSRWIYPQQDCQTEAPPL--RGQVPGYPPSQNPGMT-LPHYPYGDGNRSV 229
G PV I+ Q + A P + Q YP Q T P Y G+
Sbjct: 200 QLPRGYISIPV---IHEQNVTRPAAQPSFHQAQKTHYPAQQGEYQTHQPVYHKIQGDDWE 256
Query: 230 PQSGPTVRP-QEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPP 288
P+ P + + G R P +PS P ++ P + +P
Sbjct: 257 PRPLRAASPFRSSVQGASSREGSPARSSTPLHSPS--PIRVHTVVDRPQQPMTHRETAPV 314
Query: 289 SPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQ-- 346
S P +P+ P + + P V + E + +V+ P
Sbjct: 315 SQPENKPESKPGPVGPE---LPPGHIPIQVIRKEVDSKPVSQKPPPPSEKVEVKVPPAPV 371
Query: 347 -----------LYGNATSDHPNNQDQSSSLPEECVPSD----ESTP--PSIKKIIHVLEK 389
+ + S + S+ P E P E+ P P + K+ +LEK
Sbjct: 372 PCPPPSPGPSAVPSSPKSVATEERAAPSTAPAEATPPKPGEAEAPPKHPGVLKVEAILEK 431
Query: 390 VQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQAIL 449
VQ LEQ V+ F GKKTDK Y ++EE LTKELL LDSV+ G+ VRQAR++ V K+Q IL
Sbjct: 432 VQGLEQAVDNFEGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDGVRKVQTIL 491
Query: 450 EKLEKKGL 457
EKLE+K +
Sbjct: 492 EKLEQKAI 499
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 66.2 bits (160), Expect = 6e-11
Identities = 86/295 (29%), Positives = 102/295 (34%), Gaps = 26/295 (8%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRG--GGPAETTWLGEGG 67
GP P + P GG+ P PPPP P P PPQ S R G P G G
Sbjct: 49 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRSPPGKPQGPPPQG-GN 106
Query: 68 GGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPY-PSTYPVRPELQGQ 126
G P G P GG+ + PP P +SR+P P P P QG
Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 166
Query: 127 SLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRW 186
N GP PPG G G P S +S +P +
Sbjct: 167 ------NQPQGPPPPPGKPQGPPPQGGKK-PQGPPPPGKPQGPPPQGDKSRSSQSPPGK- 218
Query: 187 IYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASP 246
PQ PP G P PP PG P G GN+ PQ P + A
Sbjct: 219 --PQGP-----PPQGGNQPQGPPPP-PGKPQGPPPQG-GNK--PQGPPPPGKPQGPPAQG 267
Query: 247 GAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYP 301
G+ R P P PP P P+ G+PQ P +PP QP+ P
Sbjct: 268 GSKSQSARSP--PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 320
>gi|62548856 BCL2-associated athanogene 5 isoform a [Homo sapiens]
Length = 488
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PSI ++ + ++V+ +EQ+V F G DK Y LE +LTK+L E+DSV+T G+ ++QA
Sbjct: 49 PSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTEGKGDIQQA 108
Query: 438 RKEAVCKIQAILEKLEK 454
RK A + + +L++LE+
Sbjct: 109 RKRAAQETERLLKELEQ 125
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PS K + +VL + ++ EV F G +TDK Y LEE+LTK+LL LD+V+ G++ + A
Sbjct: 405 PSHKAVWNVLGNLSEIQGEVLSFDGNRTDKNYIRLEELLTKQLLALDAVDPQGEEKCKAA 464
Query: 438 RKEAVCKIQAILEKLEKK 455
RK+AV Q IL L+ K
Sbjct: 465 RKQAVRLAQNILSYLDLK 482
Score = 30.4 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 379 SIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQAR 438
SI KI VL++++ ++ E+ + + + Y + L + +LD V +R+AR
Sbjct: 316 SILKIEKVLKRMREIKNELLQ--AQNPSELYLSSKTELQGLIGQLDEVSLEKNPCIREAR 373
Query: 439 KEAVCKIQAIL------EKLEKKGL 457
+ AV ++Q ++ E LEK+ L
Sbjct: 374 RRAVIEVQTLITYIDLKEALEKRKL 398
Score = 29.6 bits (65), Expect = 5.9
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 370 VPSDESTPPSIKKIIHVLEKVQYLEQE-VEEFVGKKTDKAYWLLEEMLTKELLELDSVET 428
+P E PS+ KI V+ +V + +G ++ L +L+ + +LD+++
Sbjct: 214 LPLSEDAHPSVAKINFVMCEVNKARGVLIALLMGVNNNETCRHLSCVLSGLIADLDALDV 273
Query: 429 GGQDSVRQARKEAVCKIQAILEKLE 453
G+ +R R+E V I +L+ L+
Sbjct: 274 CGRTEIRNYRREVVEDINKLLKYLD 298
>gi|6631077 BCL2-associated athanogene 5 isoform b [Homo sapiens]
Length = 447
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PSI ++ + ++V+ +EQ+V F G DK Y LE +LTK+L E+DSV+T G+ ++QA
Sbjct: 8 PSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTEGKGDIQQA 67
Query: 438 RKEAVCKIQAILEKLEK 454
RK A + + +L++LE+
Sbjct: 68 RKRAAQETERLLKELEQ 84
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PS K + +VL + ++ EV F G +TDK Y LEE+LTK+LL LD+V+ G++ + A
Sbjct: 364 PSHKAVWNVLGNLSEIQGEVLSFDGNRTDKNYIRLEELLTKQLLALDAVDPQGEEKCKAA 423
Query: 438 RKEAVCKIQAILEKLEKK 455
RK+AV Q IL L+ K
Sbjct: 424 RKQAVRLAQNILSYLDLK 441
Score = 30.4 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 379 SIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQAR 438
SI KI VL++++ ++ E+ + + + Y + L + +LD V +R+AR
Sbjct: 275 SILKIEKVLKRMREIKNELLQ--AQNPSELYLSSKTELQGLIGQLDEVSLEKNPCIREAR 332
Query: 439 KEAVCKIQAIL------EKLEKKGL 457
+ AV ++Q ++ E LEK+ L
Sbjct: 333 RRAVIEVQTLITYIDLKEALEKRKL 357
Score = 29.6 bits (65), Expect = 5.9
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 370 VPSDESTPPSIKKIIHVLEKVQYLEQE-VEEFVGKKTDKAYWLLEEMLTKELLELDSVET 428
+P E PS+ KI V+ +V + +G ++ L +L+ + +LD+++
Sbjct: 173 LPLSEDAHPSVAKINFVMCEVNKARGVLIALLMGVNNNETCRHLSCVLSGLIADLDALDV 232
Query: 429 GGQDSVRQARKEAVCKIQAILEKLE 453
G+ +R R+E V I +L+ L+
Sbjct: 233 CGRTEIRNYRREVVEDINKLLKYLD 257
>gi|62548854 BCL2-associated athanogene 5 isoform b [Homo sapiens]
Length = 447
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PSI ++ + ++V+ +EQ+V F G DK Y LE +LTK+L E+DSV+T G+ ++QA
Sbjct: 8 PSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTEGKGDIQQA 67
Query: 438 RKEAVCKIQAILEKLEK 454
RK A + + +L++LE+
Sbjct: 68 RKRAAQETERLLKELEQ 84
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 378 PSIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQA 437
PS K + +VL + ++ EV F G +TDK Y LEE+LTK+LL LD+V+ G++ + A
Sbjct: 364 PSHKAVWNVLGNLSEIQGEVLSFDGNRTDKNYIRLEELLTKQLLALDAVDPQGEEKCKAA 423
Query: 438 RKEAVCKIQAILEKLEKK 455
RK+AV Q IL L+ K
Sbjct: 424 RKQAVRLAQNILSYLDLK 441
Score = 30.4 bits (67), Expect = 3.5
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 379 SIKKIIHVLEKVQYLEQEVEEFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQAR 438
SI KI VL++++ ++ E+ + + + Y + L + +LD V +R+AR
Sbjct: 275 SILKIEKVLKRMREIKNELLQ--AQNPSELYLSSKTELQGLIGQLDEVSLEKNPCIREAR 332
Query: 439 KEAVCKIQAIL------EKLEKKGL 457
+ AV ++Q ++ E LEK+ L
Sbjct: 333 RRAVIEVQTLITYIDLKEALEKRKL 357
Score = 29.6 bits (65), Expect = 5.9
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 370 VPSDESTPPSIKKIIHVLEKVQYLEQE-VEEFVGKKTDKAYWLLEEMLTKELLELDSVET 428
+P E PS+ KI V+ +V + +G ++ L +L+ + +LD+++
Sbjct: 173 LPLSEDAHPSVAKINFVMCEVNKARGVLIALLMGVNNNETCRHLSCVLSGLIADLDALDV 232
Query: 429 GGQDSVRQARKEAVCKIQAILEKLE 453
G+ +R R+E V I +L+ L+
Sbjct: 233 CGRTEIRNYRREVVEDINKLLKYLD 257
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 62.4 bits (150), Expect = 8e-10
Identities = 95/389 (24%), Positives = 138/389 (35%), Gaps = 49/389 (12%)
Query: 7 SGYGPS---DGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWL 63
+G+ PS D + Y P P P P P P P P GG ++
Sbjct: 1544 AGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GPSSPYIPSP--------GGAMSPSYS 1594
Query: 64 GEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYN--SNYWNSTARSRAP-YPSTYPVR 120
+ P G P + S P PSY+ S ++ T+ S +P PS P
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTS 1654
Query: 121 PELQGQSLN-SYTNGAYGPTYPP-GPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGN 178
P S + S T+ +Y PT P P + + S + Y+P T SYS PS Y +
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSPTSPS-YSPTSP 1711
Query: 179 SPTPVSRWIYPQQDCQTEAPPLRGQV-PGY-PPSQNPGMTLPHY-----PYGDGNRSVPQ 231
S +P S P + P P Y P S N T P+Y Y + S
Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Query: 232 SGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPP 291
+ P P ++ PS +P++P TSP S SP+ P P
Sbjct: 1772 TSPNYTPTSPNYSPTS----------PSYSPTSP-----SYSPTSPSYSPSSPRYTPQSP 1816
Query: 292 VQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNA 351
P SY S S P S +S + + + + +YS Y
Sbjct: 1817 TYTPSSPSYSPSSPSYS------PTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 352 TSDH-PNNQDQSSSLPEECVPSDESTPPS 379
+ + P + S + P+ S +P S
Sbjct: 1871 SPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1899
Score = 50.1 bits (118), Expect = 4e-06
Identities = 77/277 (27%), Positives = 108/277 (38%), Gaps = 31/277 (11%)
Query: 82 PGRAGGSHQEQPPYPSYN--SNYWNSTARSRAPY-PSTYPVRPELQGQSLN-SYTNGAYG 137
P + S P PSY+ S ++ T+ S +P PS P P S N S T+ Y
Sbjct: 1697 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 138 PTYPPGPGANTASYSGAYYAPGYTQTS--YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQT 195
PT P + SYS +P YT TS YS PS Y + S +P S P T
Sbjct: 1757 PT-SPSYSPTSPSYSPT--SPNYTPTSPNYSPTSPS-YSPTSPSYSPTSPSYSPSSPRYT 1812
Query: 196 -EAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWA--SPGAYGMG 252
++P P Y PS +P + Y + S S P P ++ SP
Sbjct: 1813 PQSPTYTPSSPSYSPS-SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1871
Query: 253 GRYPWPSSAPSAPPGNLYMTES-----TSPWPSSGSPQSPPSPPVQQPKDSSY-----PY 302
+Y P+S +P Y S TSP + SP+ P+ P P Y Y
Sbjct: 1872 PKYS-PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTY 1930
Query: 303 SQSDQSMNRHN------FPCSVHQYESSGTVNNDDSD 333
S + + ++ P S +S ++ DDSD
Sbjct: 1931 SPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSD 1967
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 62.0 bits (149), Expect = 1e-09
Identities = 83/304 (27%), Positives = 98/304 (32%), Gaps = 41/304 (13%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGG 69
GP P + P GG+ P PPPP P P PPQ R P + GG
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDNKSRSSRSPPGKPQGPPPQGGN 189
Query: 70 D--GYYPSGGAWPEPGRAGGSHQEQPPYPSY------NSNYWNSTARSRAPYPSTYPVRP 121
G P G P GG+ + PP P + + +ARS P P P
Sbjct: 190 QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARS----PPGKPQGP 245
Query: 122 ELQGQSLNSYTNGAYGPTYPPGPGANTASYSG----AYYAPGYTQTSYSTEVPSTYRSSG 177
QG N GP PPG G PG Q + S RSS
Sbjct: 246 PPQGG------NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGGSKSRSS- 297
Query: 178 NSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVR 237
SP + PQ Q + PP P PP Q P G PQ G R
Sbjct: 298 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR 357
Query: 238 PQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKD 297
P P PP P P+ G+PQ P +PP QP+
Sbjct: 358 SARS----------------PPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 401
Query: 298 SSYP 301
P
Sbjct: 402 PPRP 405
Score = 55.8 bits (133), Expect = 8e-08
Identities = 82/296 (27%), Positives = 94/296 (31%), Gaps = 38/296 (12%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRG------GGPAETTWL 63
GP P + P GG+ P PPPP P P PPQ S R G P +
Sbjct: 70 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRSPPGKPQGPPPQGGNQ 128
Query: 64 GEG-----GGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYP 118
+G G G P GG P+ G Q PP N + SR+ P P
Sbjct: 129 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD------NKSRSSRS--PPGKP 180
Query: 119 VRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSG--AYYAPGYTQTSYSTEVPSTYRSS 176
P QG N GP PPG G P + S
Sbjct: 181 QGPPPQG------GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQS 234
Query: 177 GNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTV 236
SP + PQ Q + PP P PP Q P G PQ G
Sbjct: 235 ARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 294
Query: 237 RPQEDAWASP-GAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGS-PQSPPSP 290
R P G GG P P PPG + P P G+ PQ PP P
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQP---QGPPPPPG-----KPQGPPPQGGNKPQGPPPP 342
Score = 54.7 bits (130), Expect = 2e-07
Identities = 79/303 (26%), Positives = 97/303 (32%), Gaps = 41/303 (13%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGG 69
GP P + P GG+ P PPPP P +P+ P P + +G P G
Sbjct: 49 GPPSPPGKPQGPPPQGGNQPQGPPPP--PGKPQGPPPQGGNKPQGPPPP--------GKP 98
Query: 70 DGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLN 129
G P G P G Q PP P P P P QG +
Sbjct: 99 QGPPPQGDKSRSPRSPPGKPQGPPPQ--------GGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 130 SYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTP-VSRWIY 188
P PP G N + S + PG Q + G P P +
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRS--PPGKPQ---GPPPQGGNQPQGPPPPPGKPQGPP 205
Query: 189 PQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSG--------PTVRPQE 240
PQ + + PP G+ G PP + P G PQ G P +PQ
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ- 264
Query: 241 DAWASPGAYGMGGRYPWPSSAPSAPP--GNLYMTESTSPWPSSGSPQSPPSPPVQQPKDS 298
P G + P P P PP G S SP G PQ PP QP+
Sbjct: 265 ---GPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSP---PGKPQGPPPQGGNQPQGP 318
Query: 299 SYP 301
P
Sbjct: 319 PPP 321
Score = 53.5 bits (127), Expect = 4e-07
Identities = 86/302 (28%), Positives = 105/302 (34%), Gaps = 59/302 (19%)
Query: 23 PGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYYPSGGAWPEP 82
P GG+ P PP P P +P+ P P + +G P G G P GG P+
Sbjct: 41 PQGGNKPQGPPSP--PGKPQGPPPQGGNQPQGPPPPP-------GKPQGPPPQGGNKPQG 91
Query: 83 GRAGGSHQEQPPYPSYNSNYWNSTARSRAP-YPSTYPVRPELQGQSLNSYTNGAYGPTYP 141
G Q PP +SR+P P P P QG N GP P
Sbjct: 92 PPPPGKPQGPPPQGD----------KSRSPRSPPGKPQGPPPQG------GNQPQGPPPP 135
Query: 142 P----GPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEA 197
P GP + PG Q + + RSS SP + PQ Q +
Sbjct: 136 PGKPQGPPPQGGNKPQGPPPPGKPQ-GPPPQGDNKSRSS-RSPPGKPQGPPPQGGNQPQG 193
Query: 198 PPLRGQVPGYPPSQN---------PGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGA 248
PP P PP Q PG P GD N+S P +PQ G
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD-NKSQSARSPPGKPQ-------GP 245
Query: 249 YGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGS-PQSPPSP-PVQQPKDSSYPYSQSD 306
GG P P PPG + P P G+ PQ PP P Q P S+S
Sbjct: 246 PPQGGNQP---QGPPPPPG-----KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSS 297
Query: 307 QS 308
+S
Sbjct: 298 RS 299
Score = 52.8 bits (125), Expect = 7e-07
Identities = 80/322 (24%), Positives = 103/322 (31%), Gaps = 45/322 (13%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRG----GGPAETT 61
RS G GP P GG+ P PPPP P +P+ P P + +G G P
Sbjct: 112 RSPPGKPQGPP------PQGGNQPQGPPPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPP 163
Query: 62 WLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTA-RSRAPYPSTYPVR 120
G+ P G P + G Q PP P + + P P P
Sbjct: 164 PQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 223
Query: 121 PELQGQSLNSYTNGAYG-PTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNS 179
P QG + + G P PP G N G PG Q GN
Sbjct: 224 PPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ--GPPPPPGKPQ--------GPPPQGGNK 273
Query: 180 PTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQ 239
P P + + PP +G PG P G GN+ P +PQ
Sbjct: 274 PQG------PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQG-GNQPQGPPPPPGKPQ 326
Query: 240 EDAWASPGAYGMGGRYPWPSSAPSAPP---GNLYMTESTSPWPSSG-------SPQSPPS 289
P G + P P P PP G+ + + P G +PQ PP
Sbjct: 327 ----GPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP 382
Query: 290 PPVQQPKDSSYPYSQSDQSMNR 311
P P+ P + Q R
Sbjct: 383 PAGGNPQQPQAPPAGQPQGPPR 404
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.4 bits (137), Expect = 3e-08
Identities = 77/281 (27%), Positives = 97/281 (34%), Gaps = 54/281 (19%)
Query: 54 GGGPAETTWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPY 113
GGG G GGGG G GG P PG GG Q P +N N + SR P
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSFGGGGP-PG-LGGLFQAGMPKLRSTANRDNDSGGSRPPL 128
Query: 114 PSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTY 173
+ P + S ++ P GPG G P Q +
Sbjct: 129 -----LPPGGRSTSAKPFSP-------PSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDV 176
Query: 174 RSSGNS-PTPVSRWIYPQQDCQTEAPPLRGQ--VPGYPPSQNPGMTLPHYPYGDGNRSVP 230
S +S P PV P Q +P RG VPG P +PG T P +P GNR
Sbjct: 177 GSKPDSIPPPVPSTPRPIQS----SPHNRGSPPVPGGPRQPSPGPTPPPFP---GNRGTA 229
Query: 231 QSGPTVRPQEDAWASPGAYGMGGRYPWP--------------------------SSAPSA 264
G ++R + +SP R P P + P
Sbjct: 230 LGGGSIRQSPLSSSSP----FSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 265 PPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQS 305
PP N ++P PS+ S PP PP +P P S S
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Score = 49.7 bits (117), Expect = 6e-06
Identities = 80/329 (24%), Positives = 107/329 (32%), Gaps = 64/329 (19%)
Query: 8 GYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPE--PPQPPISWRVRGGGPAETTWLGE 65
G+G G G +G GG PP L L P + R G + L
Sbjct: 79 GFGGGGGGGGGGSFGGGG-------PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPP 131
Query: 66 GG-----------GGDGYYPSGGAWPEPGRAGGSHQEQ-----PPYPSYNSNYWNSTARS 109
GG G G +P P PG G + Q PP P S
Sbjct: 132 GGRSTSAKPFSPPSGPGRFPV----PSPGHRSGPPEPQRNRMPPPRPDVGSK----PDSI 183
Query: 110 RAPYPST-YPVRPELQGQSLNSYTNG----AYGPTYPPGPGANTASYSGAYY--APGYTQ 162
P PST P++ + G + GPT PP PG + G +P +
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 163 TSYSTEVP---STYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPH 219
+ +S P + R+ + P P + + EA P PP QN +P
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP-------PPPQNNKPPVPS 296
Query: 220 YPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWP 279
P + P P + PG + P P NL ++ ST P P
Sbjct: 297 TPRPSASSQAPPPPPPP-------SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLP 349
Query: 280 SSG-------SPQSPPSPPVQQPKDSSYP 301
S G P P PPV+ P S P
Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Score = 30.4 bits (67), Expect = 3.5
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 32 PPPPLYPLRPE---PPQPPISWRVRGG---GPAETTW 62
P PPL P RP PP PP S +R G P E W
Sbjct: 414 PRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEW 450
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.4 bits (137), Expect = 3e-08
Identities = 77/281 (27%), Positives = 97/281 (34%), Gaps = 54/281 (19%)
Query: 54 GGGPAETTWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPY 113
GGG G GGGG G GG P PG GG Q P +N N + SR P
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSFGGGGP-PG-LGGLFQAGMPKLRSTANRDNDSGGSRPPL 128
Query: 114 PSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTY 173
+ P + S ++ P GPG G P Q +
Sbjct: 129 -----LPPGGRSTSAKPFSP-------PSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDV 176
Query: 174 RSSGNS-PTPVSRWIYPQQDCQTEAPPLRGQ--VPGYPPSQNPGMTLPHYPYGDGNRSVP 230
S +S P PV P Q +P RG VPG P +PG T P +P GNR
Sbjct: 177 GSKPDSIPPPVPSTPRPIQS----SPHNRGSPPVPGGPRQPSPGPTPPPFP---GNRGTA 229
Query: 231 QSGPTVRPQEDAWASPGAYGMGGRYPWP--------------------------SSAPSA 264
G ++R + +SP R P P + P
Sbjct: 230 LGGGSIRQSPLSSSSP----FSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 265 PPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQS 305
PP N ++P PS+ S PP PP +P P S S
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Score = 49.7 bits (117), Expect = 6e-06
Identities = 80/329 (24%), Positives = 107/329 (32%), Gaps = 64/329 (19%)
Query: 8 GYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPE--PPQPPISWRVRGGGPAETTWLGE 65
G+G G G +G GG PP L L P + R G + L
Sbjct: 79 GFGGGGGGGGGGSFGGGG-------PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPP 131
Query: 66 GG-----------GGDGYYPSGGAWPEPGRAGGSHQEQ-----PPYPSYNSNYWNSTARS 109
GG G G +P P PG G + Q PP P S
Sbjct: 132 GGRSTSAKPFSPPSGPGRFPV----PSPGHRSGPPEPQRNRMPPPRPDVGSK----PDSI 183
Query: 110 RAPYPST-YPVRPELQGQSLNSYTNG----AYGPTYPPGPGANTASYSGAYY--APGYTQ 162
P PST P++ + G + GPT PP PG + G +P +
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 163 TSYSTEVP---STYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPH 219
+ +S P + R+ + P P + + EA P PP QN +P
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP-------PPPQNNKPPVPS 296
Query: 220 YPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWP 279
P + P P + PG + P P NL ++ ST P P
Sbjct: 297 TPRPSASSQAPPPPPPP-------SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLP 349
Query: 280 SSG-------SPQSPPSPPVQQPKDSSYP 301
S G P P PPV+ P S P
Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Score = 30.4 bits (67), Expect = 3.5
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 32 PPPPLYPLRPE---PPQPPISWRVRGG---GPAETTW 62
P PPL P RP PP PP S +R G P E W
Sbjct: 414 PRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEW 450
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 57.0 bits (136), Expect = 3e-08
Identities = 74/276 (26%), Positives = 92/276 (33%), Gaps = 92/276 (33%)
Query: 23 PGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGG----GPAETTWLGEGGGGDGYYPSGGA 78
P GG+ P PPPP P +P+ P P +GG GP EG G S G
Sbjct: 41 PQGGNQPQRPPPP--PGKPQGPPP------QGGNQSQGPPPPPGKPEGRPPQGGNQSQGP 92
Query: 79 WPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGP 138
P PG+ E+PP N + P P P RP QG N ++ P
Sbjct: 93 PPHPGKP-----ERPPPQGGNQS-------QGTPPPPGKPERPPPQGG------NQSHRP 134
Query: 139 TYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAP 198
PPG E P PQ Q++ P
Sbjct: 135 PPPPG----------------------KPERPP-----------------PQGGNQSQGP 155
Query: 199 PLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP 258
P P PP Q +GN+S P +PQ P G + P P
Sbjct: 156 PPHPGKPEGPPPQ------------EGNKSRSARSPPGKPQ----GPPQQEGNKPQGPPP 199
Query: 259 SSAPSAPP---GNLYMTESTSPWPSSGSPQSPPSPP 291
P PP GN ++ P +G PQ PP PP
Sbjct: 200 PGKPQGPPPAGGNPQQPQA----PPAGKPQGPPPPP 231
Score = 33.9 bits (76), Expect = 0.32
Identities = 64/256 (25%), Positives = 80/256 (31%), Gaps = 100/256 (39%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGG 69
GP P P GG+ PPP P +PE P P GG
Sbjct: 91 GPPPHPGKPERPPPQGGNQSQGTPPP--PGKPERPPPQ-------------------GGN 129
Query: 70 DGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLN 129
+ P P PG+ E+PP N +S+ P P +P +PE
Sbjct: 130 QSHRPP----PPPGK-----PERPPPQGGN--------QSQGPPP--HPGKPE------- 163
Query: 130 SYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYP 189
GP PP G + S A PG Q E GN P
Sbjct: 164 -------GP--PPQEGNKSRS---ARSPPGKPQGPPQQE--------GNKP--------- 194
Query: 190 QQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAY 249
+ PP G+ G PP+ GN PQ+ P +PQ P
Sbjct: 195 ------QGPPPPGKPQGPPPA-------------GGNPQQPQAPPAGKPQ-----GPPPP 230
Query: 250 GMGGRYPWPSSAPSAP 265
GGR P P+ P
Sbjct: 231 PQGGRPPRPAQGQQPP 246
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 55.5 bits (132), Expect = 1e-07
Identities = 74/275 (26%), Positives = 98/275 (35%), Gaps = 48/275 (17%)
Query: 92 QPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASY 151
QP SY +T A Y ++Y P ++G S T A P G T +Y
Sbjct: 46 QPTDVSYTQAQTTATYGQTA-YATSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGYGTGAY 104
Query: 152 SGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAP--PLRGQVP---G 206
TQ SY+ + S Y + P Y QQ T AP P G P
Sbjct: 105 DTTTATVTTTQASYAAQ--SAYGTQPAYPA------YGQQPAAT-APTRPQDGNKPTETS 155
Query: 207 YPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPP 266
P S G P YG N S PQ PG+Y M ++ PS PP
Sbjct: 156 QPQSSTGGYNQPSLGYGQSNYSYPQV-------------PGSYPMQP----VTAPPSYPP 198
Query: 267 GNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGT 326
+ T+ TS SS S Q+ P + SSY S ++P Y + +
Sbjct: 199 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS 258
Query: 327 VNNDDSDLLDSQVQYSAEPQLYGNATS---DHPNN 358
QYS + YG +S DHP++
Sbjct: 259 -------------QYSQQSSSYGQQSSFRQDHPSS 280
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 55.5 bits (132), Expect = 1e-07
Identities = 85/333 (25%), Positives = 114/333 (34%), Gaps = 52/333 (15%)
Query: 6 RSGYGPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQP--PISWRVRGGGPAET--- 60
R G P GPS G GP G P + P P PP PI + GG P +
Sbjct: 13 RPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGP-SPGPPSAGHPIPTQGPGGYPQDNMHQ 71
Query: 61 ------TWLGEGGGGDGYYPS--GGAWPEPGRAG--------GSHQEQPPYPSYNSNYWN 104
+ +G D Y G G AG H + P P S + +
Sbjct: 72 MHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS 131
Query: 105 S----TARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGY 160
S + S P S+ P L G + GPT P + Y
Sbjct: 132 SPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPT----PFNQNQLHQLRAQIMAY 187
Query: 161 TQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPL-----RGQVPGYPPSQNPGM 215
+ +P + + P+ QQ T PP G PG P PG
Sbjct: 188 KMLARGQPLPDHLQMAVQGKRPMPGM---QQQMPTLPPPSVSATGPGPGPGPGPGPGPGP 244
Query: 216 TLPHY--PYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWP------SSAPSAPPG 267
P+Y P+G G ++P GP+ P PG G PWP ++AP++ P
Sbjct: 245 APPNYSRPHGMGGPNMPPPGPSGVPP----GMPGQPPGGPPKPWPEGPMANAAAPTSTPQ 300
Query: 268 NLYMTESTSPWPSSGSPQSPP-SPPVQQPKDSS 299
L + T PS P PP + PV P+ S
Sbjct: 301 KLIPPQPTGR-PSPAPPAVPPAASPVMPPQTQS 332
Score = 33.1 bits (74), Expect = 0.54
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 215 MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTES 274
M+ P P G R P GP SPGA M G P PS PG+ +
Sbjct: 1 MSTPDPPLGGTPRPGPSPGPG--------PSPGA--MLGPSPGPS------PGSAHSMMG 44
Query: 275 TSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMN 310
SP P S P P P+D+ + + +SM+
Sbjct: 45 PSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMH 80
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 55.5 bits (132), Expect = 1e-07
Identities = 83/287 (28%), Positives = 103/287 (35%), Gaps = 51/287 (17%)
Query: 23 PGGGDVPVHPPPPLYPLRPE--PPQPPISWRVRGG----GPAETTWLGEGGGGDGYYPSG 76
P GG+ P PPP P +PE PPQ GG GP EG G S
Sbjct: 41 PQGGNQPQRTPPP--PGKPEGRPPQ--------GGNQSQGPPPRPGKPEGPPPQGGNQSQ 90
Query: 77 GAWPEPGRA------GGSHQEQPP----YPSYNSNYWNSTARSRAPYPSTYPVRPELQGQ 126
G P PG+ GG+ + PP P + ++ P P P P QG
Sbjct: 91 GPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK-PEGPPPQGG 149
Query: 127 SLNSYTNGAYG-PTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVS- 184
+ + G P PP G N + G PG + +S G P P
Sbjct: 150 NQSQGPPPRPGKPEGPPPQGGNQSQ--GPPPHPGKPE---GPPPQGGNQSQGPPPRPGKP 204
Query: 185 RWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWA 244
PQ Q++ PP R P PPSQ GN+ PQ GP P +
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGPPSQG------------GNK--PQ-GPPPHPGKPQ-G 248
Query: 245 SPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPP 291
P G + P P P PP + P P +G PQ PP PP
Sbjct: 249 PPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLP-PPAGKPQGPPPPP 294
Score = 30.8 bits (68), Expect = 2.7
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 14/85 (16%)
Query: 10 GPSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGG 69
GP P + P G+ P PPPP P P PP GG + G
Sbjct: 238 GPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPP----------GGNPQQPLPPPAGKP 287
Query: 70 DGYYPSGGAWPEPGRAGGSHQEQPP 94
G P P+ GR Q QPP
Sbjct: 288 QGPPPP----PQGGRPHRPPQGQPP 308
>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
Length = 354
Score = 55.1 bits (131), Expect = 1e-07
Identities = 65/257 (25%), Positives = 93/257 (36%), Gaps = 52/257 (20%)
Query: 105 STARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTS 164
+T+ + P T P P+ Q + Y GAY T T + + A YA Q++
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTT------TATVTTTQASYA---AQSA 117
Query: 165 YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGD 224
Y T+ Y + G P + P + P Q P S G P YG
Sbjct: 118 YGTQ--PAYPAYGQQPAATA----PTRPQDGNKPTETSQ----PQSSTGGYNQPSLGYGQ 167
Query: 225 GNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSP 284
N S PQ PG+Y M ++ PS PP + T+ TS SS S
Sbjct: 168 SNYSYPQV-------------PGSYPMQP----VTAPPSYPPTSYSSTQPTSYDQSSYSQ 210
Query: 285 QSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAE 344
Q+ P + SSY S ++P Y + + QYS +
Sbjct: 211 QNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS-------------QYSQQ 257
Query: 345 PQLYGNATS---DHPNN 358
YG +S DHP++
Sbjct: 258 SSSYGQQSSFRQDHPSS 274
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 55.1 bits (131), Expect = 1e-07
Identities = 65/257 (25%), Positives = 93/257 (36%), Gaps = 52/257 (20%)
Query: 105 STARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTS 164
+T+ + P T P P+ Q + Y GAY T T + + A YA Q++
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTT------TATVTTTQASYA---AQSA 117
Query: 165 YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGD 224
Y T+ Y + G P + P + P Q P S G P YG
Sbjct: 118 YGTQ--PAYPAYGQQPAATA----PTRPQDGNKPTETSQ----PQSSTGGYNQPSLGYGQ 167
Query: 225 GNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSP 284
N S PQ PG+Y M ++ PS PP + T+ TS SS S
Sbjct: 168 SNYSYPQV-------------PGSYPMQP----VTAPPSYPPTSYSSTQPTSYDQSSYSQ 210
Query: 285 QSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAE 344
Q+ P + SSY S ++P Y + + QYS +
Sbjct: 211 QNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS-------------QYSQQ 257
Query: 345 PQLYGNATS---DHPNN 358
YG +S DHP++
Sbjct: 258 SSSYGQQSSFRQDHPSS 274
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 55.1 bits (131), Expect = 1e-07
Identities = 65/257 (25%), Positives = 93/257 (36%), Gaps = 52/257 (20%)
Query: 105 STARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTS 164
+T+ + P T P P+ Q + Y GAY T T + + A YA Q++
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTT------TATVTTTQASYA---AQSA 117
Query: 165 YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGD 224
Y T+ Y + G P + P + P Q P S G P YG
Sbjct: 118 YGTQ--PAYPAYGQQPAATA----PTRPQDGNKPTETSQ----PQSSTGGYNQPSLGYGQ 167
Query: 225 GNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSP 284
N S PQ PG+Y M ++ PS PP + T+ TS SS S
Sbjct: 168 SNYSYPQV-------------PGSYPMQP----VTAPPSYPPTSYSSTQPTSYDQSSYSQ 210
Query: 285 QSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAE 344
Q+ P + SSY S ++P Y + + QYS +
Sbjct: 211 QNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS-------------QYSQQ 257
Query: 345 PQLYGNATS---DHPNN 358
YG +S DHP++
Sbjct: 258 SSSYGQQSSFRQDHPSS 274
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 54.3 bits (129), Expect = 2e-07
Identities = 89/361 (24%), Positives = 119/361 (32%), Gaps = 82/361 (22%)
Query: 7 SGYGPSDGPS--YGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLG 64
SG GP+ G Y R GPG G+V + P YP GGP +
Sbjct: 1248 SGQGPNGGMGDPYSRAAGPGLGNVAMGPRQH-YPY---------------GGPYDRVRTE 1291
Query: 65 EGGGGDGYYPSGGAWPE------------PGRAGGSHQEQPP--YPSYNSNYWNSTARSR 110
G G +G +G P P R Q+Q + SY + + S
Sbjct: 1292 PGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSG 1351
Query: 111 APYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPG-ANTASYSGAYYAPGYTQTSYSTEV 169
+P+PS + Q Q+ +G YGP G + YS P Q +
Sbjct: 1352 SPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQ 1411
Query: 170 PSTYRSSGNSPTPVSRWIYPQ--------QDCQTEAPPLRG---QVP--------GYPPS 210
P++ + + P+P + +Y Q TE P G Q P PP
Sbjct: 1412 PASQQQAA-QPSP-QQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPG 1469
Query: 211 QNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLY 270
N +P G Q+ V Q W G M Y S SAP G Y
Sbjct: 1470 TNAQQNMPPQMMG----GPIQASAEVAQQGTMW--QGRNDMTYNYANRQSTGSAPQGPAY 1523
Query: 271 --------------MTESTSPWPSSGSPQSP-----PSPPVQQPKDSSYPYSQSDQSMNR 311
WPS G+ Q P P PP+ +P S+Y Q SM
Sbjct: 1524 HGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNY---QPPPSMQN 1580
Query: 312 H 312
H
Sbjct: 1581 H 1581
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/262 (24%), Positives = 92/262 (35%), Gaps = 27/262 (10%)
Query: 80 PEPGRAGGSHQEQPPY-PSYNSNYWNSTARSRAP--YPSTYPVRPELQGQSLNSYTNGAY 136
P G S Q+ PP P Y S+ P YP T +QG++ ++ +Y
Sbjct: 394 PYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMT------MQGRAQSAMGGLSY 447
Query: 137 GPTYPPGPGANTASYSGAYYAPGYTQTS-YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQT 195
PP + Y P Y Q S + + Y S TP ++ Y QQ Q+
Sbjct: 448 TQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQP-QS 506
Query: 196 EAPPLRGQVPGYP--PSQNPGMTLP-----------HYPYGDGNRSVPQSGPTVRPQEDA 242
+ P L+ P Y PSQ P P +P S PQ+ + Q+
Sbjct: 507 QPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQ 566
Query: 243 WASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPY 302
+P YP P S S ++ P P S S S P +S
Sbjct: 567 QPAPSTLSQQAAYPQPQSQQSQQTA---YSQQRFPPPQELSQDSFGSQASSAPSMTSSKG 623
Query: 303 SQSDQSMNRHNFPCSVHQYESS 324
Q D +++ + P S+ S
Sbjct: 624 GQEDMNLSLQSRPSSLPDLSGS 645
Score = 42.0 bits (97), Expect = 0.001
Identities = 75/311 (24%), Positives = 99/311 (31%), Gaps = 58/311 (18%)
Query: 22 GPGGGD-----VPVHP-----PPPLYPLRPEPPQPP---------ISWRVRGGGPAETTW 62
G GGG P H PPP Y + P + + GG +
Sbjct: 123 GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLA 182
Query: 63 LGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPE 122
+ GGG GG P G SH P YNS Y N RS P P+
Sbjct: 183 ALQSGGG------GGLEPYAGPQQNSHDHGFPNHQYNSYYPN---RSAYPPPAPAYALSS 233
Query: 123 LQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSPTP 182
+G + S A G PP A+ +S S ++ + + PS + G +P P
Sbjct: 234 PRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF--GAMGGGGPSA--AGGGTPQP 289
Query: 183 VSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQED- 241
A P Q+ P S P Y G PQ G + D
Sbjct: 290 T-------------ATPTLNQLLTSPSSARGYQGYPGGDYSGG----PQDGGAGKGPADM 332
Query: 242 --------AWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQ 293
A A+ A GG AP +P + + + P SP
Sbjct: 333 ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRP 392
Query: 294 QPKDSSYPYSQ 304
QP + PYSQ
Sbjct: 393 QPYGGTNPYSQ 403
Score = 40.4 bits (93), Expect = 0.003
Identities = 71/306 (23%), Positives = 105/306 (34%), Gaps = 58/306 (18%)
Query: 15 PSYGRYYGPGG----GDVPVHPPPPLYPLRPEPP--QPPISWRVRGGGPAETTWLGEGGG 68
P YG+ GP G G P + +P + +PP Q P P++T
Sbjct: 452 PPYGQQ-GPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQP---------PSQTPHA----- 496
Query: 69 GDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPS---TYPVRPELQG 125
PS P+ + QPPY S + +S APYPS T P+ Q
Sbjct: 497 ----QPSYQQQPQ-SQPPQLQSSQPPYSQQPSQPPHQ--QSPAPYPSQQSTTQQHPQSQP 549
Query: 126 QSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQ---TSYSTE--------VPSTYR 174
Y P P +T S AY P Q T+YS + ++
Sbjct: 550 PYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFG 609
Query: 175 SSGNSPTPVSRWIYPQQDCQ-------TEAPPLRGQVPGYPPSQ----NPGMTLPHYPYG 223
S +S ++ Q+D + P L G + P +PG++
Sbjct: 610 SQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSS 669
Query: 224 DGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGS 283
G +S P P SP G+ G P P +P++ + S + P +
Sbjct: 670 QGEQSNPAQSPF-----SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQM 724
Query: 284 PQSPPS 289
P PPS
Sbjct: 725 PPRPPS 730
Score = 37.4 bits (85), Expect = 0.029
Identities = 76/327 (23%), Positives = 96/327 (29%), Gaps = 83/327 (25%)
Query: 16 SYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYYPS 75
S G P H P L +R P P G PA G P
Sbjct: 669 SQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPV-------GSPASVAQSRSGPLSPAAVPG 721
Query: 76 GGAWPEP------------------GRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPST- 116
P P + G Q P P Y+S S R P
Sbjct: 722 NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQI 781
Query: 117 YPVRPELQGQSLNSY--TNGAYGPT--YPPGPGANT---ASYSGAYYAPGYTQTS----- 164
+ Q S+ SY G YGP YP P N A+Y A A G
Sbjct: 782 HTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQM 841
Query: 165 --------YSTEVPS--TYRSSGNSPTPVSRWIYPQQDCQTEAPP--------------- 199
Y T P ++ S GN P + P Q PP
Sbjct: 842 HGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM 901
Query: 200 ------LRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGG 253
++ + PGYP GM PYG G S+ + PQ Y MGG
Sbjct: 902 HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSM---AGMINPQGP------PYSMGG 952
Query: 254 RYPWPSSAPSAPP-----GNLYMTEST 275
S+ +A P G++ +T +T
Sbjct: 953 TMANNSAGMAASPEMMGLGDVKLTPAT 979
Score = 35.0 bits (79), Expect = 0.14
Identities = 86/374 (22%), Positives = 120/374 (32%), Gaps = 104/374 (27%)
Query: 32 PPPPLYPL--------RPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYYPSGGAWPEPG 83
PPP ++ + +PP P S ++G ++T GGD P+ + P
Sbjct: 1113 PPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTP--- 1169
Query: 84 RAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPG 143
H + PP P + + NS A + + Q NS T P Y P
Sbjct: 1170 -----HSQIPPLPGMSRS--NSVGIQDA-----FNDGSDSTFQKRNSMTPN---PGYQPS 1214
Query: 144 PGANTASYSGAY-YAPGYTQTSYSTEVPST--YRSSGNSPT-----PVSRWIYPQQDCQT 195
NT+ G Y P + P + + SSG P P SR
Sbjct: 1215 --MNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSR---------- 1262
Query: 196 EAPPLRGQVPGYPPSQNPGMTLPHYPYG---DGNRSVPQSGPTVRPQEDAWASPGAYGMG 252
A P G V P HYPYG D R+ P GP + S GA
Sbjct: 1263 AAGPGLGNVAMGPRQ--------HYPYGGPYDRVRTEPGIGP------EGNMSTGA---- 1304
Query: 253 GRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRH 312
P P+ PS P +Y SP S YP Q Q RH
Sbjct: 1305 ---PQPNLMPSNPDSGMY------------------SP-------SRYPPQQQQQQQQRH 1336
Query: 313 NFPCSVHQYESSGTVN-----NDDSDLLDSQVQYSAEPQ--LYGNATSDHPNNQDQSSSL 365
+ +Q+ + GT + + + + Q Q P YG H
Sbjct: 1337 D--SYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYS 1394
Query: 366 PEECVPSDESTPPS 379
+ P + PP+
Sbjct: 1395 TGQGQPQQQQLPPA 1408
Score = 30.0 bits (66), Expect = 4.6
Identities = 60/263 (22%), Positives = 86/263 (32%), Gaps = 41/263 (15%)
Query: 43 PPQPPISWRVRGGGPAETTWLGEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNY 102
PPQP + ++ G + GGGG G SGG S+ P P+ N+N
Sbjct: 65 PPQP-LGKELQDGAESN------GGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNL 117
Query: 103 WNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQ 162
P +L G +G Y P A A+ + ++ Q
Sbjct: 118 TEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAAVFHQQHGGQ 176
Query: 163 TSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPY 222
S + G P + PQQ+ G+P Q +YP
Sbjct: 177 QSPGLAALQSGGGGGLEP-----YAGPQQNSHDH---------GFPNHQYNS----YYP- 217
Query: 223 GDGNRSV-PQSGPTVRPQEDAWASP--GAYGMGGRYPWPSSAPSAPPGNLYMTEST---- 275
NRS P P +P GA G P PSS+ SA + +
Sbjct: 218 ---NRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAM 274
Query: 276 -SPWPSS---GSPQSPPSPPVQQ 294
PS+ G+PQ +P + Q
Sbjct: 275 GGGGPSAAGGGTPQPTATPTLNQ 297
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.0 bits (123), Expect = 1e-06
Identities = 87/360 (24%), Positives = 120/360 (33%), Gaps = 88/360 (24%)
Query: 29 PVHPPPPLYPLRPEPP--------------------------QPPIS--WRVRGGGPAET 60
P HPPP L+P P+PP +PP S ++ G P
Sbjct: 158 PYHPPP-LFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPH 216
Query: 61 TWLGEGGGGDGYY------PSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYP 114
L GG G GGA G G Q PP + +S+ S AP P
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISV---SSSGASGAP-P 272
Query: 115 STYPVRPELQGQSLNSYTNGA----YGPTYPPGPG---ANTASYS----GAYYAPGYTQT 163
+ P P + G +L S A P PP P N AS S GA PG+ +
Sbjct: 273 TKPPTTP-VGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPS 331
Query: 164 SYS----------------TEVPSTYR---SSGNSPTPVSRWIYPQQDCQTEAPPLRGQV 204
++ T PS + +S ++P P R+ Y + A
Sbjct: 332 PHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSS 391
Query: 205 PGYPPSQNP-GMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPS 263
S P LP YP+ P + +V Q + P + + W P
Sbjct: 392 SSSSASPFPASQALPSYPHS----FPPPTSLSVSNQPPKYTQP---SLPSQAVWSQGPPP 444
Query: 264 APPGNLYMTESTS---PWPSSGSPQSPPSPPV-------QQPKDSSYPYSQSDQSMNRHN 313
PP + S + P+P S QS PPV QQ + Q Q +H+
Sbjct: 445 PPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHH 504
Score = 51.6 bits (122), Expect = 1e-06
Identities = 86/341 (25%), Positives = 123/341 (36%), Gaps = 67/341 (19%)
Query: 24 GGGDVPVHPPPPLYP-LRPEPPQPPISWRVRGGGPAETTWLGEG------------GGGD 70
GGG++P PPP +P + P P PP + R A LG G G
Sbjct: 281 GGGNLPSAPPPANFPHVTPNLPPPP-ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGM 339
Query: 71 GYYPSGGAWPEPG-RAGGSHQEQPPYPS----------YNSNYWNSTARSRAPYPSTYPV 119
G P G PE G S PP S Y+S+ +S A S + S+
Sbjct: 340 GGLPPG---PEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSA 396
Query: 120 RPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNS 179
P Q+L SY + ++PP S S + P YTQ S ++ + +
Sbjct: 397 SPFPASQALPSYPH-----SFPP-----PTSLSVSNQPPKYTQPSLPSQ--AVWSQGPPP 444
Query: 180 PTPVSRWIYPQQDCQTEAPPLRG-QVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRP 238
P P R + PP G Q +PP ++ H+ + + Q +
Sbjct: 445 PPPYGRLLANSNAHPGPFPPSTGAQSTAHPP-----VSTHHHHHQQQQQQQQQQQQQQQQ 499
Query: 239 QEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQS-PPSPPVQQPKD 297
Q+ + G G +P P S+ + Y PS GS + PP P P
Sbjct: 500 QQQHHGNSGP-PPPGAFPHPLEGGSSHHAHPYAMS-----PSLGSLRPYPPGPAHLPPPH 553
Query: 298 SSYPYSQ-------------SDQSMNRHNFPCSVHQYESSG 325
S YSQ S S ++ ++PCS H S G
Sbjct: 554 SQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCS-HPSPSQG 593
Score = 46.6 bits (109), Expect = 5e-05
Identities = 76/286 (26%), Positives = 97/286 (33%), Gaps = 75/286 (26%)
Query: 9 YGPSDGPSYGRYYGP--GGGDVPVHP---PPPLYPLRPEPPQPPISWRVRGGGPAETTWL 63
+G S P G + P GG HP P L LRP PP GPA
Sbjct: 504 HGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP-----------GPAHL--- 549
Query: 64 GEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPEL 123
P P Q P P +S+ +S++ S+ YP ++P
Sbjct: 550 ----------------PPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP----- 588
Query: 124 QGQSLNSYTNGAYGPTYP--PGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRS-SGNSP 180
S + G G YP P P T+S A T + P+ Y++ S P
Sbjct: 589 ------SPSQGPQGAPYPFPPVPTVTTSS------ATLSTVIATVASSPAGYKTASPPGP 636
Query: 181 TPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQE 240
P + +T PP G PG PPS G T P Y + P +GP
Sbjct: 637 PPYGKRAPSPGAYKTATPP--GYKPGSPPSFRTG-TPPGY-----RGTSPPAGPGTFKPG 688
Query: 241 DAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQS 286
PG G PS PS PP P+SG P S
Sbjct: 689 SPTVGPGPLPPAG----PSGLPSLPP--------PPAAPASGPPLS 722
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 52.0 bits (123), Expect = 1e-06
Identities = 87/360 (24%), Positives = 120/360 (33%), Gaps = 88/360 (24%)
Query: 29 PVHPPPPLYPLRPEPP--------------------------QPPIS--WRVRGGGPAET 60
P HPPP L+P P+PP +PP S ++ G P
Sbjct: 158 PYHPPP-LFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPH 216
Query: 61 TWLGEGGGGDGYY------PSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYP 114
L GG G GGA G G Q PP + +S+ S AP P
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISV---SSSGASGAP-P 272
Query: 115 STYPVRPELQGQSLNSYTNGA----YGPTYPPGPG---ANTASYS----GAYYAPGYTQT 163
+ P P + G +L S A P PP P N AS S GA PG+ +
Sbjct: 273 TKPPTTP-VGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPS 331
Query: 164 SYS----------------TEVPSTYR---SSGNSPTPVSRWIYPQQDCQTEAPPLRGQV 204
++ T PS + +S ++P P R+ Y + A
Sbjct: 332 PHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSS 391
Query: 205 PGYPPSQNP-GMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPS 263
S P LP YP+ P + +V Q + P + + W P
Sbjct: 392 SSSSASPFPASQALPSYPHS----FPPPTSLSVSNQPPKYTQP---SLPSQAVWSQGPPP 444
Query: 264 APPGNLYMTESTS---PWPSSGSPQSPPSPPV-------QQPKDSSYPYSQSDQSMNRHN 313
PP + S + P+P S QS PPV QQ + Q Q +H+
Sbjct: 445 PPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHH 504
Score = 51.6 bits (122), Expect = 1e-06
Identities = 86/341 (25%), Positives = 123/341 (36%), Gaps = 67/341 (19%)
Query: 24 GGGDVPVHPPPPLYP-LRPEPPQPPISWRVRGGGPAETTWLGEG------------GGGD 70
GGG++P PPP +P + P P PP + R A LG G G
Sbjct: 281 GGGNLPSAPPPANFPHVTPNLPPPP-ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGM 339
Query: 71 GYYPSGGAWPEPG-RAGGSHQEQPPYPS----------YNSNYWNSTARSRAPYPSTYPV 119
G P G PE G S PP S Y+S+ +S A S + S+
Sbjct: 340 GGLPPG---PEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSA 396
Query: 120 RPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNS 179
P Q+L SY + ++PP S S + P YTQ S ++ + +
Sbjct: 397 SPFPASQALPSYPH-----SFPP-----PTSLSVSNQPPKYTQPSLPSQ--AVWSQGPPP 444
Query: 180 PTPVSRWIYPQQDCQTEAPPLRG-QVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRP 238
P P R + PP G Q +PP ++ H+ + + Q +
Sbjct: 445 PPPYGRLLANSNAHPGPFPPSTGAQSTAHPP-----VSTHHHHHQQQQQQQQQQQQQQQQ 499
Query: 239 QEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQS-PPSPPVQQPKD 297
Q+ + G G +P P S+ + Y PS GS + PP P P
Sbjct: 500 QQQHHGNSGP-PPPGAFPHPLEGGSSHHAHPYAMS-----PSLGSLRPYPPGPAHLPPPH 553
Query: 298 SSYPYSQ-------------SDQSMNRHNFPCSVHQYESSG 325
S YSQ S S ++ ++PCS H S G
Sbjct: 554 SQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCS-HPSPSQG 593
Score = 46.6 bits (109), Expect = 5e-05
Identities = 76/286 (26%), Positives = 97/286 (33%), Gaps = 75/286 (26%)
Query: 9 YGPSDGPSYGRYYGP--GGGDVPVHP---PPPLYPLRPEPPQPPISWRVRGGGPAETTWL 63
+G S P G + P GG HP P L LRP PP GPA
Sbjct: 504 HGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP-----------GPAHL--- 549
Query: 64 GEGGGGDGYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPEL 123
P P Q P P +S+ +S++ S+ YP ++P
Sbjct: 550 ----------------PPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP----- 588
Query: 124 QGQSLNSYTNGAYGPTYP--PGPGANTASYSGAYYAPGYTQTSYSTEVPSTYRS-SGNSP 180
S + G G YP P P T+S A T + P+ Y++ S P
Sbjct: 589 ------SPSQGPQGAPYPFPPVPTVTTSS------ATLSTVIATVASSPAGYKTASPPGP 636
Query: 181 TPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQE 240
P + +T PP G PG PPS G T P Y + P +GP
Sbjct: 637 PPYGKRAPSPGAYKTATPP--GYKPGSPPSFRTG-TPPGY-----RGTSPPAGPGTFKPG 688
Query: 241 DAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQS 286
PG G PS PS PP P+SG P S
Sbjct: 689 SPTVGPGPLPPAG----PSGLPSLPP--------PPAAPASGPPLS 722
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 51.2 bits (121), Expect = 2e-06
Identities = 87/310 (28%), Positives = 107/310 (34%), Gaps = 62/310 (20%)
Query: 28 VPVHPPPPLYPLRPEPPQ-------PPISWRVRGGGPAETTWLGEGGGGDGYYPSGGAWP 80
VPV P P P+ PPQ PP+ ++ PA T LG P
Sbjct: 664 VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQ--PPAFTPPLG--------------IP 707
Query: 81 EPGRAGGSHQEQPP----YPSYNSNYW-NSTARSRAPYPSTYPVR---PELQGQSLNSYT 132
PG G PP P +N + P P T PV P S+ +
Sbjct: 708 PPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLV 767
Query: 133 NGAYGPTYPPGPGANTASYSGAY--YAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQ 190
+GA G G + Y A AP T T+ S + G +P PV
Sbjct: 768 SGARGNA---ESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI------ 818
Query: 191 QDCQTEAPPLRGQVPGYPPSQN-PGMTLPH---YPYGDGNRSVP---QSGPTVRPQEDAW 243
Q + L G PG P Q PGM PH +P P GP P +
Sbjct: 819 -GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPP--PGPGGF 875
Query: 244 ASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSP------QSPPSPPVQQPKD 297
A P +GM G P+P P PG M P P G P Q PP P QQP+
Sbjct: 876 AMPPPHGMKG--PFPPHGPFVRPGG--MPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQP 931
Query: 298 SSYPYSQSDQ 307
+ Q Q
Sbjct: 932 QAPQQPQQQQ 941
Score = 50.1 bits (118), Expect = 4e-06
Identities = 79/304 (25%), Positives = 102/304 (33%), Gaps = 49/304 (16%)
Query: 29 PVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYYPSGGAWPEPGRAGGS 88
P+ PPP P P P PP+ ++ PA T LG P PG G
Sbjct: 674 PITVPPPQVP--PHQPGPPVVGALQP--PAFTPPLGI--------------PPPGFGPGV 715
Query: 89 HQEQPP----YPSYNSNYWNSTARSRAPYPS-TYPVR---PELQGQSLNSYTNGAYGPTY 140
PP P +N + P P T PV P S+ + +GA G
Sbjct: 716 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAE 775
Query: 141 PPGPGANTASYSGAY--YAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAP 198
G + Y A AP T T+ S + G +P PV Q +
Sbjct: 776 S---GDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI-------GLQAPST 825
Query: 199 PLRGQVPGYPPSQNP-GMTLPH---YPYGDGNRSVPQS---GPTVRPQEDAWASPGAYGM 251
L G PG P Q P GM PH +P P GP P +A P +GM
Sbjct: 826 GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPP--PGPGGFAMPPPHGM 883
Query: 252 GGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNR 311
G P+P P PG + P P + P QQP+ P + +
Sbjct: 884 KG--PFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQ 941
Query: 312 HNFP 315
P
Sbjct: 942 QQQP 945
Score = 37.4 bits (85), Expect = 0.029
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 218 PHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNL--YMTEST 275
P P+G + Q T D + P G+ + P P P G + + T
Sbjct: 316 PQAPFGFPGDGMQQPAYTQHQNMDQF-QPRMMGIQ-QDPMHHQVPLPPNGQMPGFGLLPT 373
Query: 276 SPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQ 320
P+P P PP+PPVQQP +S+ + H V Q
Sbjct: 374 PPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQ 418
Score = 29.3 bits (64), Expect = 7.8
Identities = 34/120 (28%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 11 PSDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGD 70
P P + + GP G PPP P PP P VR GG G GG G
Sbjct: 856 PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF---VRPGGMP-----GLGGPGP 907
Query: 71 GYYPSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNS 130
G GG GR Q Q P + + + P PS P + Q Q +
Sbjct: 908 G---PGGPEDRDGRQQPPQQPQ-QQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRN 963
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 51.2 bits (121), Expect = 2e-06
Identities = 97/402 (24%), Positives = 129/402 (32%), Gaps = 83/402 (20%)
Query: 12 SDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDG 71
S G SY Y P PPPP P +P+ G A LG+ G
Sbjct: 374 SYGGSYPEYSSPSA------PPPP--PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQ- 424
Query: 72 YYPSGGAWPEPG-RAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPV--RPELQGQSL 128
Y + AW R+ + P P+ + + P Y + P Q Q
Sbjct: 425 YAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS 484
Query: 129 NSYTNGAYGPT----YPPG-PGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSP--- 180
+ Y G+YGP YP G G + +G Y Y + S Y G P
Sbjct: 485 SPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYS 544
Query: 181 --------TPVSRWI--------YPQQDCQTEAPPLRGQ---VPGYP------------P 209
P ++++ PQQD E R Q PG P P
Sbjct: 545 QQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERP 604
Query: 210 SQNPGMT--LPHYPYG---------DGNRSVPQSGPTVRPQEDAW---ASPGAYGMGGRY 255
S P ++ + P G + S G P + + ASP + G
Sbjct: 605 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGG- 663
Query: 256 PWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRHNFP 315
P PS S N + SP GS Q PP PP Q + SS+P F
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPASIPGS-QMPPQPPGSQSESSSHPALSQSPMPQERGF- 721
Query: 316 CSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPN 357
+GT N QY PQ G + S HP+
Sbjct: 722 -------MAGTQRN------PQMAQYG--PQQTGPSMSPHPS 748
Score = 35.8 bits (81), Expect = 0.083
Identities = 51/209 (24%), Positives = 70/209 (33%), Gaps = 24/209 (11%)
Query: 188 YPQQDCQTEAPPLRGQVPG-YPPSQN-----PGMTLPHYPYGDGN----RSVPQSGPTVR 237
YP Q + PP G PG YP N GM P +G+ + Q
Sbjct: 1328 YPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1387
Query: 238 PQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQ--- 294
+++ P + G+YP+P S T P G QS S QQ
Sbjct: 1388 QYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMW 1447
Query: 295 --PKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNAT 352
D YPY Q+ P Y G DD + D ++ + E Q + +
Sbjct: 1448 AARNDMPYPY----QNRQGPGGPTQAPPY--PGMNRTDDMMVPDQRINH--ESQWPSHVS 1499
Query: 353 SDHPNNQDQSSSLPEECVPSDE-STPPSI 380
P +S P P TPPS+
Sbjct: 1500 QRQPYMSSSASMQPITRPPQPSYQTPPSL 1528
Score = 33.9 bits (76), Expect = 0.32
Identities = 72/299 (24%), Positives = 95/299 (31%), Gaps = 77/299 (25%)
Query: 14 GPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYY 73
G SY R + P G P PP QPP GG G Y
Sbjct: 1314 GASYDRRHEPYGQQYPGQGPP--------SGQPPY-----------------GGHQPGLY 1348
Query: 74 PSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTN 133
P +QP Y + + A+ Y ++ Q Q + +
Sbjct: 1349 P----------------QQPNYKRHMDGMYGPPAKRHE--GDMYNMQYSSQQQEMYNQYG 1390
Query: 134 GAY-GPTYPPGPGANTASYS-GAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQ 191
G+Y GP P G YS PG QT G P + P Q
Sbjct: 1391 GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQT------------HGIPPQMMGG---PLQ 1435
Query: 192 DCQTEAP-----PLRGQVP-GYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVR-PQEDAWA 244
+E P R +P Y Q PG PY NR+ P R E W
Sbjct: 1436 SSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWP 1495
Query: 245 SPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYS 303
S + R P+ SS+ S P + P PS +P S P+ + P +S+ S
Sbjct: 1496 S----HVSQRQPYMSSSASMQP------ITRPPQPSYQTPPSLPNHISRAPSPASFQRS 1544
Score = 30.0 bits (66), Expect = 4.6
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 245 SPGAYGMGGRYPWPSSAPSA--PPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPY 302
SP GG YP S+PSA PP + +++ + ++G Q+ + + + Y
Sbjct: 369 SPMMRSYGGSYP-EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
Query: 303 SQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPNNQDQS 362
+ + + ++ T+ +D V PQLYG ++ H Q QS
Sbjct: 428 ASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVM--KRPQLYGMGSNPHSQPQ-QS 484
Query: 363 SSLPEECV--PSDESTPPSIK-KIIHVLEKVQYLEQEVEEFVGKKTDKAY 409
S P P + P I+ + + +QY +Q++ G++ Y
Sbjct: 485 SPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGY 534
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 51.2 bits (121), Expect = 2e-06
Identities = 97/402 (24%), Positives = 129/402 (32%), Gaps = 83/402 (20%)
Query: 12 SDGPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDG 71
S G SY Y P PPPP P +P+ G A LG+ G
Sbjct: 374 SYGGSYPEYSSPSA------PPPP--PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQ- 424
Query: 72 YYPSGGAWPEPG-RAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPV--RPELQGQSL 128
Y + AW R+ + P P+ + + P Y + P Q Q
Sbjct: 425 YAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS 484
Query: 129 NSYTNGAYGPT----YPPG-PGANTASYSGAYYAPGYTQTSYSTEVPSTYRSSGNSP--- 180
+ Y G+YGP YP G G + +G Y Y + S Y G P
Sbjct: 485 SPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYS 544
Query: 181 --------TPVSRWI--------YPQQDCQTEAPPLRGQ---VPGYP------------P 209
P ++++ PQQD E R Q PG P P
Sbjct: 545 QQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERP 604
Query: 210 SQNPGMT--LPHYPYG---------DGNRSVPQSGPTVRPQEDAW---ASPGAYGMGGRY 255
S P ++ + P G + S G P + + ASP + G
Sbjct: 605 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGG- 663
Query: 256 PWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRHNFP 315
P PS S N + SP GS Q PP PP Q + SS+P F
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPASIPGS-QMPPQPPGSQSESSSHPALSQSPMPQERGF- 721
Query: 316 CSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPN 357
+GT N QY PQ G + S HP+
Sbjct: 722 -------MAGTQRN------PQMAQYG--PQQTGPSMSPHPS 748
Score = 35.8 bits (81), Expect = 0.083
Identities = 51/209 (24%), Positives = 70/209 (33%), Gaps = 24/209 (11%)
Query: 188 YPQQDCQTEAPPLRGQVPG-YPPSQN-----PGMTLPHYPYGDGN----RSVPQSGPTVR 237
YP Q + PP G PG YP N GM P +G+ + Q
Sbjct: 1275 YPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1334
Query: 238 PQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQ--- 294
+++ P + G+YP+P S T P G QS S QQ
Sbjct: 1335 QYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMW 1394
Query: 295 --PKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNAT 352
D YPY Q+ P Y G DD + D ++ + E Q + +
Sbjct: 1395 AARNDMPYPY----QNRQGPGGPTQAPPY--PGMNRTDDMMVPDQRINH--ESQWPSHVS 1446
Query: 353 SDHPNNQDQSSSLPEECVPSDE-STPPSI 380
P +S P P TPPS+
Sbjct: 1447 QRQPYMSSSASMQPITRPPQPSYQTPPSL 1475
Score = 33.9 bits (76), Expect = 0.32
Identities = 72/299 (24%), Positives = 95/299 (31%), Gaps = 77/299 (25%)
Query: 14 GPSYGRYYGPGGGDVPVHPPPPLYPLRPEPPQPPISWRVRGGGPAETTWLGEGGGGDGYY 73
G SY R + P G P PP QPP GG G Y
Sbjct: 1261 GASYDRRHEPYGQQYPGQGPP--------SGQPPY-----------------GGHQPGLY 1295
Query: 74 PSGGAWPEPGRAGGSHQEQPPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTN 133
P +QP Y + + A+ Y ++ Q Q + +
Sbjct: 1296 P----------------QQPNYKRHMDGMYGPPAKRHE--GDMYNMQYSSQQQEMYNQYG 1337
Query: 134 GAY-GPTYPPGPGANTASYS-GAYYAPGYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQ 191
G+Y GP P G YS PG QT G P + P Q
Sbjct: 1338 GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQT------------HGIPPQMMGG---PLQ 1382
Query: 192 DCQTEAP-----PLRGQVP-GYPPSQNPGMTLPHYPYGDGNRSVPQSGPTVR-PQEDAWA 244
+E P R +P Y Q PG PY NR+ P R E W
Sbjct: 1383 SSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWP 1442
Query: 245 SPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPYS 303
S + R P+ SS+ S P + P PS +P S P+ + P +S+ S
Sbjct: 1443 S----HVSQRQPYMSSSASMQP------ITRPPQPSYQTPPSLPNHISRAPSPASFQRS 1491
Score = 30.0 bits (66), Expect = 4.6
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 245 SPGAYGMGGRYPWPSSAPSA--PPGNLYMTESTSPWPSSGSPQSPPSPPVQQPKDSSYPY 302
SP GG YP S+PSA PP + +++ + ++G Q+ + + + Y
Sbjct: 369 SPMMRSYGGSYP-EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
Query: 303 SQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAEPQLYGNATSDHPNNQDQS 362
+ + + ++ T+ +D V PQLYG ++ H Q QS
Sbjct: 428 ASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVM--KRPQLYGMGSNPHSQPQ-QS 484
Query: 363 SSLPEECV--PSDESTPPSIK-KIIHVLEKVQYLEQEVEEFVGKKTDKAY 409
S P P + P I+ + + +QY +Q++ G++ Y
Sbjct: 485 SPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGY 534
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 50.4 bits (119), Expect = 3e-06
Identities = 81/316 (25%), Positives = 102/316 (32%), Gaps = 81/316 (25%)
Query: 12 SDGPSYGRYY---------GPGGGDVPV-HPPPPL------YPLRPEPPQPPISWRV--- 52
+ GPS R Y GPGGG HP P L +P++ P PP W
Sbjct: 370 NSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPP 429
Query: 53 -----------RGGGPAETTWLGEGGGGDGYY---PSGGAWPEPGRAGGSHQEQPPYPSY 98
G P +LG G G Y G P P G PP PS
Sbjct: 430 PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM--GMMPPPPPPPS- 486
Query: 99 NSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAP 158
+ P P + P+ P Q Q P PP P ++ AS
Sbjct: 487 ----------GQPPPPPSGPLPPWQQQQQQ---------PPPPPPPSSSMASS------- 520
Query: 159 GYTQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLP 218
T + +T S+G P + QQ A P Q+ G P T+
Sbjct: 521 --TPLPWQQNTTTTTTSAGTGSIPP----WQQQQAAAAASPGAPQMQGNP-------TMV 567
Query: 219 HYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTE-STSP 277
P G P + P P PG+ GM P P P P + M +
Sbjct: 568 PLPPGVQPPLPPGAPPPPPPPP-----PGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAG 622
Query: 278 WPSSGSPQSPPSPPVQ 293
P G P +PP PP Q
Sbjct: 623 MPPFGMPPAPPPPPPQ 638
Score = 38.5 bits (88), Expect = 0.013
Identities = 53/196 (27%), Positives = 64/196 (32%), Gaps = 22/196 (11%)
Query: 198 PPLRGQVPGYPPSQNPG------MTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGM 251
P L G G+P NP M P P G GP P D + G
Sbjct: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGP---PPMDQYLGSTPVG- 457
Query: 252 GGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSPQSPPS---PPVQQPKDSSYPYSQSDQS 308
G Y PP + M P P SG P PPS PP QQ + P S
Sbjct: 458 SGVYRLHQGKGMMPPPPMGMMPPPPP-PPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSS 516
Query: 309 MNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSA------EPQLYGNATSDHPNNQDQS 362
M + P Q ++ T + + Q Q +A PQ+ GN T P
Sbjct: 517 M-ASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTM-VPLPPGVQ 574
Query: 363 SSLPEECVPSDESTPP 378
LP P PP
Sbjct: 575 PPLPPGAPPPPPPPPP 590
Score = 34.3 bits (77), Expect = 0.24
Identities = 51/204 (25%), Positives = 65/204 (31%), Gaps = 38/204 (18%)
Query: 93 PPYPSYNSNYWNSTARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYS 152
PP PS S T +SR P+ ++ G S + +G +G GPG
Sbjct: 353 PPPPSLMS-----TTQSRPPWMNS--------GPSESRPYHGMHGG----GPGG------ 389
Query: 153 GAYYAPGYTQTSYSTEVPSTYRSSGNSPT------PVSRWIYPQQDCQTEAPPLRGQVPG 206
PG S+ +PS G P P W+ P + P G
Sbjct: 390 -----PGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGP 444
Query: 207 YPPSQNPGMTLPHYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPP 266
P Q G T P G G + Q + P P G+ P P S P P
Sbjct: 445 PPMDQYLGST----PVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPW 500
Query: 267 GNLYMTESTSPWPSSGSPQSPPSP 290
P PSS S P P
Sbjct: 501 QQQQQQPPPPPPPSSSMASSTPLP 524
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,221,096
Number of Sequences: 37866
Number of extensions: 1926390
Number of successful extensions: 15868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 1006
Number of HSP's that attempted gapping in prelim test: 10570
Number of HSP's gapped (non-prelim): 4931
length of query: 457
length of database: 18,247,518
effective HSP length: 106
effective length of query: 351
effective length of database: 14,233,722
effective search space: 4996036422
effective search space used: 4996036422
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.