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Search of human proteins with 63025220
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63025220 ring finger protein 215 [Homo sapiens]
(377 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63025220 ring finger protein 215 [Homo sapiens] 763 0.0
gi|56711322 ring finger protein 43 [Homo sapiens] 80 2e-15
gi|150378447 zinc and ring finger 3 [Homo sapiens] 76 6e-14
gi|29789407 ring finger protein 149 [Homo sapiens] 74 2e-13
gi|29788758 ring finger protein 130 [Homo sapiens] 72 8e-13
gi|58331204 ring finger protein 150 [Homo sapiens] 69 9e-12
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 68 2e-11
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 68 2e-11
gi|37675277 ring finger protein 148 [Homo sapiens] 65 1e-10
gi|21040269 ring finger protein 133 [Homo sapiens] 64 3e-10
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 62 6e-10
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 62 6e-10
gi|7662486 ring finger protein 44 [Homo sapiens] 62 1e-09
gi|34577087 ring finger protein 13 [Homo sapiens] 61 2e-09
gi|6005864 ring finger protein 13 [Homo sapiens] 61 2e-09
gi|14149702 ring finger protein 167 [Homo sapiens] 60 3e-09
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 59 5e-09
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 59 5e-09
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 59 9e-09
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 59 9e-09
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 59 9e-09
gi|5174653 ring finger protein 6 [Homo sapiens] 58 2e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 58 2e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 58 2e-08
gi|38045931 ring finger protein 122 [Homo sapiens] 58 2e-08
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 56 5e-08
gi|150170725 zinc and ring finger 4 [Homo sapiens] 55 1e-07
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 763 bits (1969), Expect = 0.0
Identities = 377/377 (100%), Positives = 377/377 (100%)
Query: 1 MGPAARPALRSPPPPPPPPPSPLLLLLPLLPLWLGLAGPGAAADGSEPAAGAGRGGARAV 60
MGPAARPALRSPPPPPPPPPSPLLLLLPLLPLWLGLAGPGAAADGSEPAAGAGRGGARAV
Sbjct: 1 MGPAARPALRSPPPPPPPPPSPLLLLLPLLPLWLGLAGPGAAADGSEPAAGAGRGGARAV 60
Query: 61 RVDVRLPRQDALVLEGVRIGSEADPAPLLGGRLLLMDIVDAEQEAPVEGWIAVAYVGKEQ 120
RVDVRLPRQDALVLEGVRIGSEADPAPLLGGRLLLMDIVDAEQEAPVEGWIAVAYVGKEQ
Sbjct: 61 RVDVRLPRQDALVLEGVRIGSEADPAPLLGGRLLLMDIVDAEQEAPVEGWIAVAYVGKEQ 120
Query: 121 AAQFHQENKGSGPQAYPKALVQQMRRALFLGASALLLLILNHNVVRELDISQLLLRPVIV 180
AAQFHQENKGSGPQAYPKALVQQMRRALFLGASALLLLILNHNVVRELDISQLLLRPVIV
Sbjct: 121 AAQFHQENKGSGPQAYPKALVQQMRRALFLGASALLLLILNHNVVRELDISQLLLRPVIV 180
Query: 181 LHYSSNVTKLLDALLQRTQATAEITSGESLSANIEWKLTLWTTCGLSKDGYGGWQDLVCL 240
LHYSSNVTKLLDALLQRTQATAEITSGESLSANIEWKLTLWTTCGLSKDGYGGWQDLVCL
Sbjct: 181 LHYSSNVTKLLDALLQRTQATAEITSGESLSANIEWKLTLWTTCGLSKDGYGGWQDLVCL 240
Query: 241 GGSRAQEQKPLQQLWNAILLVAMLLCTGLVVQAQRQASRQSQRELGGQVDLFKRRVVRRL 300
GGSRAQEQKPLQQLWNAILLVAMLLCTGLVVQAQRQASRQSQRELGGQVDLFKRRVVRRL
Sbjct: 241 GGSRAQEQKPLQQLWNAILLVAMLLCTGLVVQAQRQASRQSQRELGGQVDLFKRRVVRRL 300
Query: 301 ASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQ 360
ASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQ
Sbjct: 301 ASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQ 360
Query: 361 TCPLCKFNVLGNRYSDD 377
TCPLCKFNVLGNRYSDD
Sbjct: 361 TCPLCKFNVLGNRYSDD 377
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 80.5 bits (197), Expect = 2e-15
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 290 DLFKRRVVRRLASLKTRRCRLS-RAAQG-LPDPG-----AETCAVCLDYFCNKQWLRVLP 342
D ++R ++ L TRR + S R A+G PD G A CA+CL+ F Q LRV+
Sbjct: 230 DPLQQRTAWAISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVIS 289
Query: 343 CKHEFHRDCVDPWLMLQQTCPLCKFNV 369
C HEFHR+CVDPWL +TCPLC FN+
Sbjct: 290 CLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 75.9 bits (185), Expect = 6e-14
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 243 SRAQEQKPLQQ-------LWNAILLVAMLLCTGLVVQAQ--RQASRQSQRELGGQVDLFK 293
+R Q + P Q ++ A +V L+C L+V+ + ++ S+ S L Q L K
Sbjct: 103 ARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQA-LEK 161
Query: 294 RRVVRRLASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVD 353
+ + K RR A L CA+CL+ + + + LRV+PC H FHR CVD
Sbjct: 162 METRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVD 221
Query: 354 PWLMLQQTCPLCKFNVL 370
PWL+ TCP C+ N++
Sbjct: 222 PWLLQHHTCPHCRHNII 238
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 74.3 bits (181), Expect = 2e-13
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
D AE CAVC++ F K +R+LPCKH FHR C+DPWL+ +TCP+CK +V+
Sbjct: 263 DVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 314
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 72.0 bits (175), Expect = 8e-13
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
DP + CAVC++ + +R+LPCKH FH+ CVDPWL TCP+CK N+L
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNIL 309
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 68.6 bits (166), Expect = 9e-12
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
+ CAVC++ + +R+LPC+H FH+ CVDPWL+ +TCP+CK N+L
Sbjct: 276 DNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 323
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 67.8 bits (164), Expect = 2e-11
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 293 KRRVVRRLASLKTRRCRLSRAAQGLPD--PGAETCAVCLDYFCNKQWLRVLPCKHEFHRD 350
K+R ++ A R +L QG + P ++CAVC++ + +R+L C H FH+
Sbjct: 243 KQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT 302
Query: 351 CVDPWLMLQQTCPLCKFNVL 370
CVDPWL+ +TCP+CK ++L
Sbjct: 303 CVDPWLLEHRTCPMCKCDIL 322
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 67.8 bits (164), Expect = 2e-11
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 293 KRRVVRRLASLKTRRCRLSRAAQGLPD--PGAETCAVCLDYFCNKQWLRVLPCKHEFHRD 350
K+R ++ A R +L QG + P ++CAVC++ + +R+L C H FH+
Sbjct: 217 KQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKT 276
Query: 351 CVDPWLMLQQTCPLCKFNVL 370
CVDPWL+ +TCP+CK ++L
Sbjct: 277 CVDPWLLEHRTCPMCKCDIL 296
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 64.7 bits (156), Expect = 1e-10
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
D + C VC D + + +R+L CKH FH+ C+DPWL+ +TCP+CK ++L
Sbjct: 252 DLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDIL 303
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 63.5 bits (153), Expect = 3e-10
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 319 DPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
+P ++C +C + + +R+L CKH FH++C+DPW++ TCP+CK ++L
Sbjct: 250 NPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKCDIL 301
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 62.4 bits (150), Expect = 6e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 413 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 380 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 62.4 bits (150), Expect = 6e-10
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC+ F ++Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 463 CVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 61.6 bits (148), Expect = 1e-09
Identities = 24/42 (57%), Positives = 28/42 (66%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCK 366
C VC F +Q LRVLPC HEFH CVD WL +TCP+C+
Sbjct: 380 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
Score = 32.0 bits (71), Expect = 0.94
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 6 RPALRSPPPPPPPPPSP-------LLLLLPLLPLWLGLAGPGAAAD 44
R L+ P PPPPPPP P L L +LP+ GP + D
Sbjct: 281 RYRLQQPLPPPPPPPPPPPYYPSFLPYFLSMLPMSPTAMGPTISLD 326
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 60.8 bits (146), Expect = 2e-09
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWL-MLQQTCPLCKFNVLGNRYSDD 377
+ CA+CLD + + LR+LPC H +H CVDPWL ++TCP+CK V+ ++ D
Sbjct: 238 DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 60.8 bits (146), Expect = 2e-09
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWL-MLQQTCPLCKFNVLGNRYSDD 377
+ CA+CLD + + LR+LPC H +H CVDPWL ++TCP+CK V+ ++ D
Sbjct: 238 DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 60.1 bits (144), Expect = 3e-09
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWL-MLQQTCPLCK 366
+ CA+CLD + + LRVLPC H +H CVDPWL ++TCP+CK
Sbjct: 228 DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 59.3 bits (142), Expect = 5e-09
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL--GNRYS 375
+TC+VC+ + LR LPC HE+H C+D WL TCP+C+ VL GNR S
Sbjct: 568 KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRES 622
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 59.3 bits (142), Expect = 5e-09
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL--GNRYS 375
+TC+VC+ + LR LPC HE+H C+D WL TCP+C+ VL GNR S
Sbjct: 568 KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRES 622
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 58.5 bits (140), Expect = 9e-09
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
E CAVCL+ F + L + PCKH FHR C+ WL +++ CPLC VL
Sbjct: 97 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 144
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 58.5 bits (140), Expect = 9e-09
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
E CAVCL+ F + L + PCKH FHR C+ WL +++ CPLC VL
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 58.5 bits (140), Expect = 9e-09
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
E CAVCL+ F + L + PCKH FHR C+ WL +++ CPLC VL
Sbjct: 76 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.8 bits (138), Expect = 2e-08
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNRYSDD 377
C+VC+ + LR LPC HEFH C+D WL TCP+C+ VLG+ +++
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIANN 684
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.8 bits (138), Expect = 2e-08
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNRYSDD 377
C+VC+ + LR LPC HEFH C+D WL TCP+C+ VLG+ +++
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIANN 684
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 57.8 bits (138), Expect = 2e-08
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 325 CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNRYSDD 377
C+VC+ + LR LPC HEFH C+D WL TCP+C+ VLG+ +++
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIANN 684
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 57.8 bits (138), Expect = 2e-08
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLC 365
+TCAVCL+ F K L VLPC+H FHR C+ WL ++ CP+C
Sbjct: 91 QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 56.2 bits (134), Expect = 5e-08
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
E C +C + + L VLPC H+FH C+ PWLM Q TCP C+ +VL
Sbjct: 1146 EPCVICHENLSPEN-LSVLPCAHKFHAQCIRPWLMQQGTCPTCRLHVL 1192
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 55.1 bits (131), Expect = 1e-07
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLML--QQTCPLCKFNVLGNRYSDD 377
+ CA+CLD + L++LPC H +H C+DPW +++CP+CK +V S D
Sbjct: 307 DLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFD 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,031,737
Number of Sequences: 37866
Number of extensions: 923803
Number of successful extensions: 21429
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 13114
Number of HSP's gapped (non-prelim): 5182
length of query: 377
length of database: 18,247,518
effective HSP length: 104
effective length of query: 273
effective length of database: 14,309,454
effective search space: 3906480942
effective search space used: 3906480942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.