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Search of human proteins with 62953131
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62953131 macrophage erythroblast attacher isoform 1 [Homo
sapiens]
(396 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62953131 macrophage erythroblast attacher isoform 1 [Homo sap... 793 0.0
gi|62953129 macrophage erythroblast attacher isoform 2 [Homo sap... 691 0.0
gi|21362098 required for meiotic nuclear division 5 homolog B [H... 77 2e-14
gi|12232469 required for meiotic nuclear division 5 homolog A [H... 75 1e-13
gi|8923557 chromosome 20 open reading frame 11 [Homo sapiens] 53 5e-07
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 40 0.003
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 39 0.011
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 37 0.024
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 36 0.053
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 36 0.053
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 35 0.12
gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4 is... 35 0.15
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 34 0.26
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 34 0.26
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 34 0.26
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 33 0.34
gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso... 33 0.34
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 33 0.59
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 33 0.59
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 33 0.59
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 32 1.3
gi|28195388 RAB11 family interacting protein 4 (class II) [Homo ... 31 1.7
gi|110347443 TATA element modulatory factor 1 [Homo sapiens] 31 2.2
gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens] 31 2.2
gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens] 31 2.2
gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens] 31 2.2
gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis... 30 2.9
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 30 2.9
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 30 2.9
gi|5902142 DNA polymerase sigma [Homo sapiens] 30 3.8
>gi|62953131 macrophage erythroblast attacher isoform 1 [Homo
sapiens]
Length = 396
Score = 793 bits (2048), Expect = 0.0
Identities = 396/396 (100%), Positives = 396/396 (100%)
Query: 1 MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG 60
MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG
Sbjct: 1 MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG 60
Query: 61 CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW 120
CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW
Sbjct: 61 CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW 120
Query: 121 KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLA 180
KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLA
Sbjct: 121 KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLA 180
Query: 181 WCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM 240
WCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM
Sbjct: 181 WCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM 240
Query: 241 GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP 300
GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP
Sbjct: 241 GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP 300
Query: 301 QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY 360
QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY
Sbjct: 301 QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY 360
Query: 361 VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM 396
VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM
Sbjct: 361 VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM 396
>gi|62953129 macrophage erythroblast attacher isoform 2 [Homo
sapiens]
Length = 355
Score = 691 bits (1782), Expect = 0.0
Identities = 355/396 (89%), Positives = 355/396 (89%), Gaps = 41/396 (10%)
Query: 1 MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG 60
MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG
Sbjct: 1 MAVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSG 60
Query: 61 CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW 120
CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW
Sbjct: 61 CPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVW 120
Query: 121 KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLA 180
KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIE
Sbjct: 121 KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIE---------------------------- 152
Query: 181 WCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM 240
SCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM
Sbjct: 153 -------------SCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAM 199
Query: 241 GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP 300
GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP
Sbjct: 200 GMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTP 259
Query: 301 QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY 360
QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY
Sbjct: 260 QCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGY 319
Query: 361 VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM 396
VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM
Sbjct: 320 VYGYNSLLSIRQDDKVVCPRTKEVFHFSQAEKVYIM 355
>gi|21362098 required for meiotic nuclear division 5 homolog B [Homo
sapiens]
Length = 393
Score = 77.4 bits (189), Expect = 2e-14
Identities = 80/353 (22%), Positives = 146/353 (41%), Gaps = 11/353 (3%)
Query: 37 QKNIDRETSHVTMVVAELEKT-LSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDES 95
+++++ +V + AEL L G P ++ ++ K+ +K + S
Sbjct: 26 ERSLEELLHYVGQLRAELASAALQGTPLSATLSLVMSQCCRKIKDTVQKLASDHKDIHSS 85
Query: 96 AKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMM-----VEHLLRCGYYNTAVKLARQSG 150
+ I+ + + +VW + + + VEHL + G + A +L ++S
Sbjct: 86 VSRVGKAIDRNFDSEICGVVSDAVWDAREQQQQILQMAIVEHLYQQGMLSVAEELCQEST 145
Query: 151 IE-DLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELI 209
+ DL + FL + E+L ++ L W ++ RL ++ S LEF L FI L+
Sbjct: 146 LNVDLDFKQPFLELNRILEALHEQDLGPALEWAVSHRQRLLELNSSLEFKLHRLHFIRLL 205
Query: 210 RQN--KRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAF-PPDTHISPYKDLLDPARWRML 266
K+L+A+ +AR HF E++ MG L + SPY LLD + W +
Sbjct: 206 AGGPAKQLEALSYAR-HFQPFARLHQREIQVMMGSLVYLRLGLEKSPYCHLLDSSHWAEI 264
Query: 267 IQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQ 326
+ F D L L S +++ +G A+ K + + +
Sbjct: 265 CETFTRDACSLLGLSVESPLSVSFASGCVALPVLMNIKAVIEQRQCTGVWNHKDELPIEI 324
Query: 327 PLPMAHCANSRLVCKISGDVMNENNPPMMLPNGYVYGYNSLLSIRQDDKVVCP 379
L M +S C I +++NPP+ L G+V ++L + K+ CP
Sbjct: 325 ELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVISRDALNKLINGGKLKCP 377
>gi|12232469 required for meiotic nuclear division 5 homolog A [Homo
sapiens]
Length = 391
Score = 74.7 bits (182), Expect = 1e-13
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 11/265 (4%)
Query: 122 RKRMDRMMVEHLLRCGYYNTAVKLARQSGIE-DLVNIEMFLTAKEVEESLERRETATCLA 180
++ ++ +MVEH R G + A +L ++SG+ D E F+ + E+L+ R L
Sbjct: 115 QRLLNEVMVEHFFRQGMLDVAEELCQESGLSVDPSQKEPFVELNRILEALKVRVLRPALE 174
Query: 181 WCHDNKSRLRKMKSCLEFSLRIQEFIELIR---QNKRLDAVRHARKHFSQAEGSQLDEVR 237
W N+ L S LEF L FI L+ N+R +A+++A K+F + +++
Sbjct: 175 WAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQR-EALQYA-KNFQPFALNHQKDIQ 232
Query: 238 QAMGMLAF-PPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSA 296
MG L + SPY LLD +W + F D L L S +++ AG A
Sbjct: 233 VLMGSLVYLRQGIENSPYVHLLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGCVA 292
Query: 297 IKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCA--NSRLVCKISGDVMNENNPPM 354
+ P + C ++L + + +S C I +NNPPM
Sbjct: 293 L--PALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPM 350
Query: 355 MLPNGYVYGYNSLLSIRQDDKVVCP 379
L G++ ++L + K+ CP
Sbjct: 351 KLVCGHIISRDALNKMFNGSKLKCP 375
>gi|8923557 chromosome 20 open reading frame 11 [Homo sapiens]
Length = 228
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 121 KRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATCLA 180
+R M+R+++ +L+ G+ A K +SGIE V++E ++ E + + + +A
Sbjct: 25 QRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIKIREMILKGQIQEAIA 84
Query: 181 WCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFS-QAEGSQ--LDEVR 237
+ L L F L+ Q IELIRQ + A+ A+ + Q E S+ L E+
Sbjct: 85 LINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEME 144
Query: 238 QAMGMLAFPPDTHISPYKDLL 258
+ + +LAF SP+ DLL
Sbjct: 145 RTLALLAFDSPEE-SPFGDLL 164
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 40.4 bits (93), Expect = 0.003
Identities = 53/265 (20%), Positives = 107/265 (40%), Gaps = 45/265 (16%)
Query: 2 AVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC 61
A ++ LS+ ++E K E LNK+FR +++ V V ELEK+
Sbjct: 1471 AREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSVHELEKSKRAL 1530
Query: 62 -PAVDSVVSLLDGVVEK--------------LSVLKRKAVESIQAEDESAKLCKRRI--- 103
V+ + + L+ + ++ L +K + +Q DE ++ K+++
Sbjct: 1531 EQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQ 1590
Query: 104 -----EHLKEHSSDQPAAASVWKRKRMDRMMVEHLLRCGYYN--TAVKLARQSGIEDLVN 156
L++ + A + K+ MD +E + N A+K R+ +
Sbjct: 1591 VREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIKQLRK------LQ 1644
Query: 157 IEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLD 216
+M +E++++ RE LA +N+ +L+ M++ E+I+ + L
Sbjct: 1645 AQMKDCMRELDDTRASRE--EILAQAKENEKKLKSMEA------------EMIQLQEELA 1690
Query: 217 AVRHARKHFSQAEGSQLDEVRQAMG 241
A A++ Q DE+ + G
Sbjct: 1691 AAERAKRQAQQERDELADEIANSSG 1715
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 38.5 bits (88), Expect = 0.011
Identities = 48/254 (18%), Positives = 105/254 (41%), Gaps = 32/254 (12%)
Query: 9 QLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCPA----- 63
++ + K++E E +N A ++ ++ E S + + +LE TL+
Sbjct: 915 KIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT 974
Query: 64 ------VDSVVSLLDGVVEKLSVLKR-------KAVESIQAEDESAKLCKRRIEHLKEHS 110
+ ++ LD + KLS K+ + ++ +QAE++ + + L++
Sbjct: 975 ENKVKNLTEEMAGLDETIAKLSKEKKALQETHQQTLDDLQAEEDKVNILTKAKTKLEQQV 1034
Query: 111 SDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESL 170
D + K+ RMD + L +KLA++S ++M ++++E L
Sbjct: 1035 DDLEGSLEQEKKLRMDLERAKRKL-----EGDLKLAQES------TMDMENDKQQLDEKL 1083
Query: 171 ERR--ETATCLAWCHDNKS-RLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQ 227
E++ E + ++ D ++ ++ K E RI+E E I + A ++
Sbjct: 1084 EKKEFEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLS 1143
Query: 228 AEGSQLDEVRQAMG 241
E ++ E + G
Sbjct: 1144 RELEEISERLEEAG 1157
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 37.4 bits (85), Expect = 0.024
Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 32/255 (12%)
Query: 8 AQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCPA---- 63
A+ + K++E E +N A ++ ++ E S + + +LE TL+
Sbjct: 912 AKFQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHA 971
Query: 64 ----VDSVVSLLDGVVEKLSVLKRK----------AVESIQAEDESAKLCKRRIEHLKEH 109
V ++ L G+ E ++ L R+ A++ +QAE++ + L++
Sbjct: 972 TENKVKNLTEELSGLDETIAKLTREKKALQEAHQQALDDLQAEEDKVNSLNKTKSKLEQQ 1031
Query: 110 SSDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEES 169
D ++ K+ R+D + L +KLA++S I DL N ++++E
Sbjct: 1032 VEDLESSLEQEKKLRVDLERNKRKL-----EGDLKLAQES-ILDLEN-----DKQQLDER 1080
Query: 170 LERRETATCLAWC---HDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFS 226
L++++ C + L+ K E RI+E E I + A ++
Sbjct: 1081 LKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEIEAERATRAKTEKQRSDY 1140
Query: 227 QAEGSQLDEVRQAMG 241
E +L E + G
Sbjct: 1141 ARELEELSERLEEAG 1155
Score = 30.0 bits (66), Expect = 3.8
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 24/241 (9%)
Query: 4 QESAAQLSMTLKVQ-----EYPTLKVPYETLNKRFRAAQ---KNIDRETSHVTMVVAELE 55
+ES A+L +LK E LK YE + + KN+++E + +T +AE
Sbjct: 1462 EESQAELEASLKESRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEIADLTEQIAENG 1521
Query: 56 KTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQA--EDESAKLCKRRIEHLKEHSS-D 112
KT+ + L EK + + A+E +A E E AK+ + ++E + S D
Sbjct: 1522 KTIHELEKSRKQIEL-----EKADI--QLALEEAEAALEHEEAKILRIQLELTQVKSEID 1574
Query: 113 QPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLER 172
+ A + +++ R + A +R I +E L E++ S
Sbjct: 1575 RKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQLSHAN 1634
Query: 173 RETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQ 232
R+ A L + +L+ + L+ +LR QE + K A+ R + QAE +
Sbjct: 1635 RQAAETLKHLRSVQGQLKDTQLHLDDALRGQEDL------KEQLAIVERRANLLQAEVEE 1688
Query: 233 L 233
L
Sbjct: 1689 L 1689
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 [Homo
sapiens]
Length = 1288
Score = 36.2 bits (82), Expect = 0.053
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 34 RAAQKNIDRETSHVTMVVAELEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAED 93
+ A +N+ + V E++ T VD + + L + +K + + + + ++
Sbjct: 928 KTADRNLQKAQDSVLRTEKEIKDTEK---EVDDLTAELKSLEDKAAEVVKNTNAAEESLP 984
Query: 94 ESAKLCKRRIEHLK-----EHSSDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQ 148
E K + ++ LK EH+ + A + K +++D + EH + Y++ +
Sbjct: 985 EIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWHKEISKISL 1044
Query: 149 SGIEDLVNIEMFLTAKEVEESLERRETAT-----CLAWCHDNKSRLRKMKSCLEFSLRIQ 203
IED E+ + + E E+++ ++ T A CH+ K L + E+ + +
Sbjct: 1045 HPIEDNPIEEISVLSPEDLEAIKNPDSITNQIALLEARCHEMKPNL---GAIAEYKKKEE 1101
Query: 204 EFIELIRQNKRLDAVRHARKHFSQA 228
+++ + + LD + + R F QA
Sbjct: 1102 LYLQRVAE---LDKITYERDSFRQA 1123
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 [Homo
sapiens]
Length = 1288
Score = 36.2 bits (82), Expect = 0.053
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 34 RAAQKNIDRETSHVTMVVAELEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAED 93
+ A +N+ + V E++ T VD + + L + +K + + + + ++
Sbjct: 928 KTADRNLQKAQDSVLRTEKEIKDTEK---EVDDLTAELKSLEDKAAEVVKNTNAAEESLP 984
Query: 94 ESAKLCKRRIEHLK-----EHSSDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQ 148
E K + ++ LK EH+ + A + K +++D + EH + Y++ +
Sbjct: 985 EIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWHKEISKISL 1044
Query: 149 SGIEDLVNIEMFLTAKEVEESLERRETAT-----CLAWCHDNKSRLRKMKSCLEFSLRIQ 203
IED E+ + + E E+++ ++ T A CH+ K L + E+ + +
Sbjct: 1045 HPIEDNPIEEISVLSPEDLEAIKNPDSITNQIALLEARCHEMKPNL---GAIAEYKKKEE 1101
Query: 204 EFIELIRQNKRLDAVRHARKHFSQA 228
+++ + + LD + + R F QA
Sbjct: 1102 LYLQRVAE---LDKITYERDSFRQA 1123
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 35.0 bits (79), Expect = 0.12
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 1 MAVQESAAQLSMTLKVQEYPTLKVPYET---LNKRFRAAQKNIDRETSHVTMVVAELEKT 57
M+V+E A L LK +E +V + F+ AQ+ + ET V++E+E T
Sbjct: 368 MSVEEKATNLEDMLKEEEKDVKEVDVQLNLIKGVLFKKAQE-LQTETMKEKAVLSEIEGT 426
Query: 58 LSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAA 117
S + L+ ++KL K E + ++D + +RR+ LK + + A
Sbjct: 427 RSS-------LKHLNHQLQKLDFETLKQQEIMYSQDFHIQQVERRMSRLKGEINSEEKQA 479
Query: 118 SVWKRKRMDRMMVEHLLRCGYYNTAVK 144
K + + + E CG T +K
Sbjct: 480 LEAKIVELRKSLEEKKSTCGLLETQIK 506
>gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4
isoform b [Homo sapiens]
Length = 766
Score = 34.7 bits (78), Expect = 0.15
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 110 SSDQPAAASVWKRKRMDRMMV---EHLLRCGYYNTAVKLA-RQSGIEDLVNIEMFLTAKE 165
+ D+P A+V + M + + E L G ++ + RQSG E V I ++
Sbjct: 384 AGDRPGRAAVARSAMMQQYELDLREPALGQGSFSVCRRCRQRQSGQEFAVKI----LSRR 439
Query: 166 VEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHF 225
+E + +R A L H N L ++ L +EL+R + L+ +R R HF
Sbjct: 440 LEANTQREVAALRLCQSHPNVVNLHEVH---HDQLHTYLVLELLRGGELLEHIRKKR-HF 495
Query: 226 SQAEGSQLDEVRQAMGMLAFPPDTHISPYKDL 257
S++E SQ+ +R + ++F + ++DL
Sbjct: 496 SESEASQI--LRSLVSAVSFMHEEAGVVHRDL 525
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 33.9 bits (76), Expect = 0.26
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 47/250 (18%)
Query: 22 LKVPYETLNKRFRAAQKNIDR--ETSHVTMVVAELEKTLSGCPAV---------DSVVSL 70
+++ +E+L++ F QK + E ++ + + LSG P +V SL
Sbjct: 819 MRMKWESLHQEFSTKQKLLQNVLEQEQEQVLYSRPNRLLSGVPLYKGDVPTQDKSAVTSL 878
Query: 71 LDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMMV 130
LDG+ +A E + ++ AK R+ HL++ D +A S W +R+ V
Sbjct: 879 LDGL--------NQAFEEVSSQSGGAK---RQSIHLEQKLYDGVSATSTWLDDVEERLFV 927
Query: 131 EHLL-----RCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERR----ETATCLAW 181
L +N + + + ++ L ++ E+ + R +T CL
Sbjct: 928 ATALLPEETETCLFNQEILAKDIKEMSEEMDKNKNLFSQAFPENGDNRDVIEDTLGCLLG 987
Query: 182 ------------CHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAE 229
CH K RL+++ L F ++ + NK + ++ F Q
Sbjct: 988 RLSLLDSVVNQRCHQMKERLQQI---LNFQNDLKVLFTSLADNKYI-ILQKLANVFEQPV 1043
Query: 230 GSQLDEVRQA 239
Q++ ++QA
Sbjct: 1044 AEQIEAIQQA 1053
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 33.9 bits (76), Expect = 0.26
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 47/250 (18%)
Query: 22 LKVPYETLNKRFRAAQKNIDR--ETSHVTMVVAELEKTLSGCPAV---------DSVVSL 70
+++ +E+L++ F QK + E ++ + + LSG P +V SL
Sbjct: 6224 MRMKWESLHQEFSTKQKLLQNVLEQEQEQVLYSRPNRLLSGVPLYKGDVPTQDKSAVTSL 6283
Query: 71 LDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMMV 130
LDG+ +A E + ++ AK R+ HL++ D +A S W +R+ V
Sbjct: 6284 LDGL--------NQAFEEVSSQSGGAK---RQSIHLEQKLYDGVSATSTWLDDVEERLFV 6332
Query: 131 EHLL-----RCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERR----ETATCLAW 181
L +N + + + ++ L ++ E+ + R +T CL
Sbjct: 6333 ATALLPEETETCLFNQEILAKDIKEMSEEMDKNKNLFSQAFPENGDNRDVIEDTLGCLLG 6392
Query: 182 ------------CHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAE 229
CH K RL+++ L F ++ + NK + ++ F Q
Sbjct: 6393 RLSLLDSVVNQRCHQMKERLQQI---LNFQNDLKVLFTSLADNKYI-ILQKLANVFEQPV 6448
Query: 230 GSQLDEVRQA 239
Q++ ++QA
Sbjct: 6449 AEQIEAIQQA 6458
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 33.9 bits (76), Expect = 0.26
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 47/250 (18%)
Query: 22 LKVPYETLNKRFRAAQKNIDR--ETSHVTMVVAELEKTLSGCPAV---------DSVVSL 70
+++ +E+L++ F QK + E ++ + + LSG P +V SL
Sbjct: 6295 MRMKWESLHQEFSTKQKLLQNVLEQEQEQVLYSRPNRLLSGVPLYKGDVPTQDKSAVTSL 6354
Query: 71 LDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMMV 130
LDG+ +A E + ++ AK R+ HL++ D +A S W +R+ V
Sbjct: 6355 LDGL--------NQAFEEVSSQSGGAK---RQSIHLEQKLYDGVSATSTWLDDVEERLFV 6403
Query: 131 EHLL-----RCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERR----ETATCLAW 181
L +N + + + ++ L ++ E+ + R +T CL
Sbjct: 6404 ATALLPEETETCLFNQEILAKDIKEMSEEMDKNKNLFSQAFPENGDNRDVIEDTLGCLLG 6463
Query: 182 ------------CHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAE 229
CH K RL+++ L F ++ + NK + ++ F Q
Sbjct: 6464 RLSLLDSVVNQRCHQMKERLQQI---LNFQNDLKVLFTSLADNKYI-ILQKLANVFEQPV 6519
Query: 230 GSQLDEVRQA 239
Q++ ++QA
Sbjct: 6520 AEQIEAIQQA 6529
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 33.5 bits (75), Expect = 0.34
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 56 KTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPA 115
++LSGCP S + E++ +K++A I+ DE K I+ L E +S
Sbjct: 1024 RSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIE-NDEEIKQLDEEIKELNESNSQM-- 1080
Query: 116 AASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFL 161
A + K + M +L N ++ +S + +L N+ L
Sbjct: 1081 EADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHELANLSQSL 1126
>gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4
isoform a [Homo sapiens]
Length = 772
Score = 33.5 bits (75), Expect = 0.34
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 147 RQSGIEDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFI 206
RQSG E V I ++ +E + +R A L H N L ++ L +
Sbjct: 431 RQSGQEFAVKI----LSRRLEANTQREVAALRLCQSHPNVVNLHEVH---HDQLHTYLVL 483
Query: 207 ELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAFPPDTHISPYKDL 257
EL+R + L+ +R R HFS++E SQ+ +R + ++F + ++DL
Sbjct: 484 ELLRGGELLEHIRKKR-HFSESEASQI--LRSLVSAVSFMHEEAGVVHRDL 531
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 32.7 bits (73), Expect = 0.59
Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 9 QLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCP------ 62
++ + KV+E E +N A ++ ++ E S + + +LE TL+
Sbjct: 912 KIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAKVEKEKHAT 971
Query: 63 ------------AVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHS 110
+D +++ L + L ++A++ +QAE++ + L++
Sbjct: 972 ENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQV 1031
Query: 111 SDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESL 170
D + K+ RMD + L +KL ++S I DL N ++++E L
Sbjct: 1032 DDLEGSLEQEKKVRMDLERAKRKL-----EGDLKLTQES-IMDLEN-----DKQQLDERL 1080
Query: 171 ERR--ETATCLAWCHDNKSRLRKM-KSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQ 227
+++ E A D ++ ++ K E RI+E E L+A R AR +
Sbjct: 1081 KKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEE------ELEAERTARAKVEK 1134
Query: 228 AEGS---QLDEVRQAM 240
+L+E+ + +
Sbjct: 1135 LRSDLSRELEEISERL 1150
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.7 bits (73), Expect = 0.59
Identities = 46/254 (18%), Positives = 101/254 (39%), Gaps = 32/254 (12%)
Query: 9 QLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCP------ 62
++ + K++E E +N A ++ ++ E S + + +LE TL+
Sbjct: 918 KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT 977
Query: 63 ------------AVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHS 110
+D ++ L + L ++ ++ +QAE++ + L++
Sbjct: 978 ENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQV 1037
Query: 111 SDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESL 170
D + K+ RMD + L +KLA++S I D+ N ++++E L
Sbjct: 1038 DDLEGSLEQEKKLRMDLERAKRKL-----EGDLKLAQES-IMDIEN-----EKQQLDEKL 1086
Query: 171 ERR--ETATCLAWCHDNKS-RLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQ 227
+++ E + + D ++ ++ K E RI+E E I + A ++
Sbjct: 1087 KKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLS 1146
Query: 228 AEGSQLDEVRQAMG 241
E ++ E + G
Sbjct: 1147 RELEEISERLEEAG 1160
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.7 bits (73), Expect = 0.59
Identities = 46/254 (18%), Positives = 101/254 (39%), Gaps = 32/254 (12%)
Query: 9 QLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCP------ 62
++ + K++E E +N A ++ ++ E S + + +LE TL+
Sbjct: 918 KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT 977
Query: 63 ------------AVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHS 110
+D ++ L + L ++ ++ +QAE++ + L++
Sbjct: 978 ENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQV 1037
Query: 111 SDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESL 170
D + K+ RMD + L +KLA++S I D+ N ++++E L
Sbjct: 1038 DDLEGSLEQEKKLRMDLERAKRKL-----EGDLKLAQES-IMDIEN-----EKQQLDEKL 1086
Query: 171 ERR--ETATCLAWCHDNKS-RLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQ 227
+++ E + + D ++ ++ K E RI+E E I + A ++
Sbjct: 1087 KKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLS 1146
Query: 228 AEGSQLDEVRQAMG 241
E ++ E + G
Sbjct: 1147 RELEEISERLEEAG 1160
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 31.6 bits (70), Expect = 1.3
Identities = 52/258 (20%), Positives = 99/258 (38%), Gaps = 41/258 (15%)
Query: 2 AVQESAAQLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGC 61
A ++ LS+ ++E K +E NK+ RA +++ V V ELEK+
Sbjct: 1478 AREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRAL 1537
Query: 62 -PAVDSVVSLLDGVVEKL--------------SVLKRKAVESIQAEDESAKLCKRRI--- 103
V+ + + L+ + ++L +K + +Q DE + KR +
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQ 1597
Query: 104 -----EHLKEHSSDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIE 158
L++ + A + K+ +D +E + A AR I+ L ++
Sbjct: 1598 VRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIE------AANKARDEVIKQLRKLQ 1651
Query: 159 MFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAV 218
+ K+ + LE + + +S +K+KS L++QE L +
Sbjct: 1652 AQM--KDYQRELEEARASRDEIFAQSKESE-KKLKSLEAEILQLQE---------ELASS 1699
Query: 219 RHARKHFSQAEGSQLDEV 236
AR+H Q DE+
Sbjct: 1700 ERARRHAEQERDELADEI 1717
>gi|28195388 RAB11 family interacting protein 4 (class II) [Homo
sapiens]
Length = 637
Score = 31.2 bits (69), Expect = 1.7
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 65 DSVVSLLDGVVEKLSVLKRKAVE----SIQAEDESAKLCK------RRIEHLKEHSSDQP 114
DS+ S + + EK+S L++K E S+ D +KL + R+ L+E DQ
Sbjct: 331 DSIDSCDNDITEKVSFLEKKVTELENDSLTNGDLKSKLKQENTQLVHRVHELEEMVKDQE 390
Query: 115 AAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIE-DLVNIEMFLTAKEVEESLERR 173
A ++ + E R + KL R+ E +L+N + + EE+ E R
Sbjct: 391 TTA--------EQALEEEARR--HREAYGKLEREKATEVELLNARV---QQLEEENTELR 437
Query: 174 ETATCLAWCHD--NKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFS---QA 228
T T L + ++ R R + SLR+++ ++L + + +D +R R F +A
Sbjct: 438 TTVTRLKSQTEKLDEERQRMSDRLEDTSLRLKDEMDLYK--RMMDKLRQNRLEFQKEREA 495
Query: 229 EGSQLDEVRQAMGMLAFPPDTHISPYK-DLLDPARWR 264
++++R+ + H+ YK D P R R
Sbjct: 496 TQELIEDLRKEL--------EHLQMYKLDCERPGRGR 524
>gi|110347443 TATA element modulatory factor 1 [Homo sapiens]
Length = 1093
Score = 30.8 bits (68), Expect = 2.2
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 2 AVQESAAQ---LSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTL 58
A ++S AQ LS +K +E L E + R Q+ + + + + + E+
Sbjct: 675 AAKDSEAQEAALSREMKAKE--ELSAALEKAQEEARQQQETLAIQVGDLRLALQRTEQ-- 730
Query: 59 SGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAAS 118
+ D + + + ++L + + E Q+ + + R+IE+L+ Q ++
Sbjct: 731 AAARKEDYLRHEIGELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQATLGSQTSSWE 790
Query: 119 VWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESLERRETATC 178
++ DR+ L AV+ R + E+L+ ++ +++ E + SL R+E +
Sbjct: 791 KLEKNLSDRLGESQTLLAA----AVERER-AATEELLANKIQMSSMESQNSLLRQENSRF 845
Query: 179 LAWCHDNKSRLRKMK 193
A K+RL K++
Sbjct: 846 QAQLESEKNRLCKLE 860
>gi|41281753 NIMA-related kinase 11 isoform 2 [Homo sapiens]
Length = 470
Score = 30.8 bits (68), Expect = 2.2
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 2 AVQESAAQLSMTLKVQEYPTLKVPY-----ETLNKRFRAA---QKNID--RETSHVTMVV 51
A+ ES + +L+ LK+PY + L R+ KN+D +E +H+ +
Sbjct: 262 AIMESMLNKNPSLRPSAIEILKIPYLDEQLQNLMCRYSEMTLEDKNLDCQKEAAHI---I 318
Query: 52 AELEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSS 111
++K + + ++ +L + V+K++ +R + +QA DE A+ K+ +E E +S
Sbjct: 319 NAMQKRIH----LQTLRALSE--VQKMTPRERMRLRKLQAADEKARKLKKIVEEKYEENS 372
>gi|225637562 NIMA-related kinase 11 isoform 3 [Homo sapiens]
Length = 599
Score = 30.8 bits (68), Expect = 2.2
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 2 AVQESAAQLSMTLKVQEYPTLKVPY-----ETLNKRFRAA---QKNID--RETSHVTMVV 51
A+ ES + +L+ LK+PY + L R+ KN+D +E +H+ +
Sbjct: 262 AIMESMLNKNPSLRPSAIEILKIPYLDEQLQNLMCRYSEMTLEDKNLDCQKEAAHI---I 318
Query: 52 AELEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSS 111
++K + + ++ +L + V+K++ +R + +QA DE A+ K+ +E E +S
Sbjct: 319 NAMQKRIH----LQTLRALSE--VQKMTPRERMRLRKLQAADEKARKLKKIVEEKYEENS 372
>gi|225637560 NIMA-related kinase 11 isoform 1 [Homo sapiens]
Length = 645
Score = 30.8 bits (68), Expect = 2.2
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 2 AVQESAAQLSMTLKVQEYPTLKVPY-----ETLNKRFRAA---QKNID--RETSHVTMVV 51
A+ ES + +L+ LK+PY + L R+ KN+D +E +H+ +
Sbjct: 262 AIMESMLNKNPSLRPSAIEILKIPYLDEQLQNLMCRYSEMTLEDKNLDCQKEAAHI---I 318
Query: 52 AELEKTLSGCPAVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSS 111
++K + + ++ +L + V+K++ +R + +QA DE A+ K+ +E E +S
Sbjct: 319 NAMQKRIH----LQTLRALSE--VQKMTPRERMRLRKLQAADEKARKLKKIVEEKYEENS 372
>gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis 1,
RH-linked) isoform 3 [Homo sapiens]
Length = 588
Score = 30.4 bits (67), Expect = 2.9
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 34 RAAQKNIDRETSHVTMVVAE-LEKTLSGCPAVDSV---------VSLLDGVVEKLSVLKR 83
R A IDR H ++ ++L G AVDS ++ G V + VL
Sbjct: 309 RQASALIDRPAPHFERTASKRASRSLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDA 368
Query: 84 KAVESI--QAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMD 126
A +++ +A+ E+ K ++ + E + +P A KR+R+D
Sbjct: 369 SAKKTVVPKAQKETVKAEVKKEDEPPEQAEPEPTEAWKKKRERLD 413
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 30.4 bits (67), Expect = 2.9
Identities = 44/251 (17%), Positives = 95/251 (37%), Gaps = 26/251 (10%)
Query: 9 QLSMTLKVQEYPTLKVPYETLNKRFRAAQKNIDRETSHVTMVVAELEKTLSGCP------ 62
++ + K++E E +N A ++ ++ E S + + +LE TL+
Sbjct: 916 KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT 975
Query: 63 ------------AVDSVVSLLDGVVEKLSVLKRKAVESIQAEDESAKLCKRRIEHLKEHS 110
+D ++ L + L ++ ++ +QAE++ + L++
Sbjct: 976 ENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQV 1035
Query: 111 SDQPAAASVWKRKRMDRMMVEHLLRCGYYNTAVKLARQSGIEDLVNIEMFLTAKEVEESL 170
D + K+ RMD + L +KLA++S + D+ N + L K ++
Sbjct: 1036 DDLEGSLEQEKKIRMDLERAKRKL-----EGDLKLAQESTM-DIENDKQQLDEKLKKKEF 1089
Query: 171 ERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEG 230
E + + + ++ K E RI+E E I + A ++ E
Sbjct: 1090 EMSGLQSKIE--DEQALGMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSREL 1147
Query: 231 SQLDEVRQAMG 241
++ E + G
Sbjct: 1148 EEISERLEEAG 1158
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 30.4 bits (67), Expect = 2.9
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 78 LSVLKRKAVESIQAEDESAKLCKRRIEHLKEHSSDQPAAASVWKRKRMDRMMVEHLLRCG 137
+S LK+K Q E E K +RRIE L+++ +D P V + +++ E
Sbjct: 487 ISSLKKKC----QKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILEEK----- 537
Query: 138 YYNTAVKLARQSGIEDLVNIEMFLTAKEVE---ESLERRETATCLAWCHDNKSRLRKMKS 194
N ++ A + L I+ KE + + + +E T + +S +K++
Sbjct: 538 --NKNLQEALIDTEKKLEEIKKQCQDKETQLICQKKKEKELVTTV------QSLQQKVER 589
Query: 195 CLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEV 236
CLE +R+ QN+ D +R + S+ SQ DE+
Sbjct: 590 CLEDGIRLPMLDAKQLQNEN-DNLRQQNETASKIIDSQQDEI 630
>gi|5902142 DNA polymerase sigma [Homo sapiens]
Length = 542
Score = 30.0 bits (66), Expect = 3.8
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 302 CYKEDGSSKSPDCPVCSRSLNKLAQPLPMAHCANSRLVCKISGDVMNENNPPMMLPNGYV 361
C E ++ P+ P R L+ P ++ +++ V +SG ++ + PP P+ Y
Sbjct: 325 CNGEQTQNREPESPYGQRLTLSLSSPQLLSSGSSASSVSSLSGSDVDSDTPPCTTPSVYQ 384
Query: 362 Y 362
+
Sbjct: 385 F 385
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,958,754
Number of Sequences: 37866
Number of extensions: 572173
Number of successful extensions: 1990
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1958
Number of HSP's gapped (non-prelim): 70
length of query: 396
length of database: 18,247,518
effective HSP length: 104
effective length of query: 292
effective length of database: 14,309,454
effective search space: 4178360568
effective search space used: 4178360568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.