Guide to the Human Genome
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Name: RMND5A Sequence: fasta or formatted (391aa) NCBI GI: 12232469
Description:

required for meiotic nuclear division 5 homolog A

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         23           1
 C cysteine            3.8         15           2
 D aspartate           5.9         23           1
 E glutamate           6.6         26           2
 F phenylalanine       3.8         15           2
 G glycine             5.9         23           2
 H histidine           2.8         11           1
 I isoleucine          5.9         23           2
 K lysine              5.9         23           2
 L leucine            12.0         47           2
 M methionine          2.3          9           1
 N asparagine          4.1         16           2
 P proline             3.6         14           2
 Q glutamine           6.6         26           2
 R arginine            4.3         17           1
 S serine              7.7         30           2
 T threonine           2.8         11           2
 V valine              6.6         26           1
 W tryptophan          1.3          5           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   required for meiotic nuclear division 5 homolog A [H... 
RMND5B                0.709   required for meiotic nuclear division 5 homolog B [H...
MAEA                  0.065   macrophage erythroblast attacher isoform 1 
MAEA                  0.029   macrophage erythroblast attacher isoform 2 
TRIM32                0.012   tripartite motif-containing 32 
TRIM32                0.012   tripartite motif-containing 32 
TNPO3                 0.010   transportin 3 
NSMCE2                0.009   non-SMC element 2, MMS21 homolog 
RNF125                0.008   ring finger protein 125 
GGA1                  0.008   golgi associated, gamma adaptin ear containing, ARF b...
UHRF1                 0.008   ubiquitin-like with PHD and ring finger domains 1 i...
UHRF1                 0.008   ubiquitin-like with PHD and ring finger domains 1 i...
GOLGA3                0.008   Golgi autoantigen, golgin subfamily a, 3 
TRIM56                0.007   tripartite motif-containing 56 
KTN1                  0.007   kinectin 1 isoform b 
KTN1                  0.007   kinectin 1 isoform a 
KTN1                  0.007   kinectin 1 isoform c 
KTN1                  0.007   kinectin 1 isoform a 
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform alph...
TPM4                  0.005   tropomyosin 4 isoform 1 
TNNI3                 0.005   troponin I, cardiac 
LRRC8B                0.005   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.005   leucine rich repeat containing 8 family, member B [H...
RC3H2                 0.005   ring finger and CCCH-type zinc finger domains 2 iso...
RC3H1                 0.005   roquin 
RC3H2                 0.005   ring finger and CCCH-type zinc finger domains 2 iso...
GGA1                  0.005   golgi associated, gamma adaptin ear containing, ARF ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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