Guide to the Human Genome
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Name: VEZT Sequence: fasta or formatted (779aa) NCBI GI: 155030244
Description:

vezatin, adherens junctions transmembrane protein

Referenced in:

Cadherins and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         46           2
 C cysteine            1.9         15           1
 D aspartate           4.7         37           2
 E glutamate          10.1         79           4
 F phenylalanine       3.9         30           2
 G glycine             3.2         25           2
 H histidine           2.4         19           1
 I isoleucine          4.5         35           2
 K lysine              6.3         49           2
 L leucine            13.0        101           3
 M methionine          1.2          9           1
 N asparagine          4.1         32           2
 P proline             5.3         41           2
 Q glutamine           6.3         49           3
 R arginine            4.2         33           2
 S serine              8.3         65           2
 T threonine           5.6         44           2
 V valine              5.5         43           2
 W tryptophan          1.3         10           2
 Y tyrosine            2.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vezatin, adherens junctions transmembrane protein [... 
CCDC150               0.014   coiled-coil domain containing 150 
OSBPL8                0.012   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.012   oxysterol-binding protein-like protein 8 isoform a [...
EEA1                  0.011   early endosome antigen 1, 162kD 
NOL8                  0.011   nucleolar protein 8 
MYO18A                0.010   myosin 18A isoform b 
MYO18A                0.010   myosin 18A isoform a 
SGOL1                 0.009   shugoshin-like 1 isoform A1 
SGOL1                 0.009   shugoshin-like 1 isoform A2 
CCDC144A              0.008   coiled-coil domain containing 144A 
GNL2                  0.007   guanine nucleotide binding protein-like 2 (nucleolar)...
WWC1                  0.007   WW and C2 domain containing 1 isoform 3 
WWC1                  0.007   WW and C2 domain containing 1 isoform 2 
WWC1                  0.007   WW and C2 domain containing 1 isoform 1 
PDE4DIP               0.007   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.007   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.007   phosphodiesterase 4D interacting protein isoform 1 ...
DST                   0.007   dystonin isoform 1e precursor 
UPF3B                 0.007   UPF3 regulator of nonsense transcripts homolog B iso...
PMFBP1                0.007   polyamine modulated factor 1 binding protein 1 isof...
SYNE1                 0.007   spectrin repeat containing, nuclear envelope 1 isof...
ADD2                  0.007   adducin 2 isoform c 
ADD2                  0.007   adducin 2 isoform a 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 1 
UPF3B                 0.007   UPF3 regulator of nonsense transcripts homolog B iso...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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