TAF9 34252

Name: TAF9	Sequence: fasta or formatted (264aa)		NCBI GI: 62865614
Description: TAF9 RNA polymerase II, TATA box binding protein-associated factor isoform a		Referenced in: Ribosomes RNA Polymerase and General Transcription Factors p53 Pathway
Other entries for this name: alt mRNA [264aa] TAF9 RNA polymerase II, TATA box binding protein-associated facto... alt prot [169aa] TAF9 RNA polymerase II, TATA box binding protein-associated facto... alt prot [172aa] TAF9 RNA polymerase II, TATA box binding protein-associated facto...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 20 1 C cysteine 0.8 2 1 D aspartate 8.7 23 11 E glutamate 2.3 6 1 F phenylalanine 1.9 5 1 G glycine 3.4 9 1 H histidine 0.4 1 1 I isoleucine 5.3 14 1 K lysine 6.1 16 2 L leucine 7.6 20 2 M methionine 4.2 11 2 N asparagine 4.2 11 1 P proline 8.7 23 3 Q glutamine 5.3 14 1 R arginine 6.1 16 1 S serine 10.6 28 2 T threonine 9.5 25 2 V valine 4.9 13 1 W tryptophan 0.0 0 0 Y tyrosine 2.7 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TAF9 RNA polymerase II, TATA box binding protein-ass... TAF9 1.000 TAF9 RNA polymerase II, TATA box binding protein-asso... TAF9B 0.742 transcription associated factor 9B MUC2 0.024 mucin 2 precursor LOC100288514 0.024 PREDICTED: hypothetical protein LOC100288514 0.024 PREDICTED: hypothetical protein XP_002343198 MUC6 0.024 mucin 6, gastric C19orf2 0.022 RPB5-mediating protein isoform b C19orf2 0.022 RPB5-mediating protein isoform a LOC100131514 0.020 PREDICTED: similar to hCG1747327, partial MUC16 0.020 mucin 16 MUC5B 0.020 mucin 5, subtype B, tracheobronchial SON 0.020 SON DNA-binding protein isoform F SON 0.020 SON DNA-binding protein isoform B LOC440577 0.020 PREDICTED: similar to nucleophosmin 1 LOC440577 0.020 PREDICTED: similar to nucleophosmin 1 LOC440577 0.020 PREDICTED: similar to nucleophosmin 1 ASPN 0.020 asporin HIVEP2 0.020 human immunodeficiency virus type I enhancer bindin... LOC100128719 0.018 PREDICTED: hypothetical protein, partial LOC100128719 0.018 PREDICTED: hypothetical protein, partial NACA 0.018 nascent polypeptide-associated complex alpha subuni... LOC100132635 0.018 PREDICTED: similar to mucin 5, partial UBTF 0.018 upstream binding transcription factor, RNA polymera... UBTF 0.018 upstream binding transcription factor, RNA polymera... UBTF 0.018 upstream binding transcription factor, RNA polymerase... MUC5AC 0.016 mucin 5AC ATAD2 0.016 ATPase family, AAA domain containing 2 HRC 0.016 histidine rich calcium binding protein precursor [Hom... VPRBP 0.016 HIV-1 Vpr binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.