BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|62751417 RAB, member of RAS oncogene family-like 3 [Homo sapiens] (236 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|62751417 RAB, member of RAS oncogene family-like 3 [Homo sapi... 478 e-135 gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 60 1e-09 gi|40255119 RAS and EF-hand domain containing [Homo sapiens] 59 5e-09 gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 58 6e-09 gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 57 1e-08 gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 57 2e-08 gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 57 2e-08 gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 57 2e-08 gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 56 3e-08 gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens] 56 3e-08 gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 55 5e-08 gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 54 9e-08 gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 54 9e-08 gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 54 9e-08 gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 54 9e-08 gi|16933567 mel transforming oncogene [Homo sapiens] 54 1e-07 gi|31795535 RAB36, member RAS oncogene family [Homo sapiens] 54 1e-07 gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 54 2e-07 gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 54 2e-07 gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 54 2e-07 gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [... 54 2e-07 gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Ho... 54 2e-07 gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 54 2e-07 gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 54 2e-07 gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo sapi... 53 2e-07 gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo sapi... 53 2e-07 gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 53 2e-07 gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] 53 2e-07 gi|4758996 Ras-related protein Rab-33A [Homo sapiens] 52 3e-07 gi|19923483 GTPase Rab14 [Homo sapiens] 52 4e-07 >gi|62751417 RAB, member of RAS oncogene family-like 3 [Homo sapiens] Length = 236 Score = 478 bits (1231), Expect = e-135 Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 1 MASLDRVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTY 60 MASLDRVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTY Sbjct: 1 MASLDRVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTY 60 Query: 61 YIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVP 120 YIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVP Sbjct: 61 YIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVP 120 Query: 121 TGVLVTNGDYDQEQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFNPEEINLDC 180 TGVLVTNGDYDQEQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFNPEEINLDC Sbjct: 121 TGVLVTNGDYDQEQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFNPEEINLDC 180 Query: 181 TNPRYLAAGSSNAVKLSRFFDKVIEKRYFLREGNQIPGFPDRKRFGAGTLKSLHYD 236 TNPRYLAAGSSNAVKLSRFFDKVIEKRYFLREGNQIPGFPDRKRFGAGTLKSLHYD Sbjct: 181 TNPRYLAAGSSNAVKLSRFFDKVIEKRYFLREGNQIPGFPDRKRFGAGTLKSLHYD 236 >gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] Length = 201 Score = 60.5 bits (145), Expect = 1e-09 Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 11/128 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGKSSL+ N G+ T+G VD ++ + + K +++WD Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIG--VDFKIRTVEINGEKVK---LQIWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPT-GVLVT 126 G ++ + +Y +G+I V+D+T+ +S N++RW L +N++ +LV Sbjct: 65 AGQ----ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRW-LHEINQNCDDVCRILVG 119 Query: 127 NGDYDQEQ 134 N + D E+ Sbjct: 120 NKNDDPER 127 >gi|40255119 RAS and EF-hand domain containing [Homo sapiens] Length = 740 Score = 58.5 bits (140), Expect = 5e-09 Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 28/143 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+++ GD+ VGKSS + LC+N+ N S T+G VD ++ K + + ++LWD Sbjct: 543 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLG--VDFQM---KTLIVDGERTVLQLWDT 597 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G S KS ++ +G++ ++D+T +KS N+R W D++ Sbjct: 598 AGQERFRSIAKS----YFRKADGVLLLYDVTCEKSFLNIREWV------DMI-------- 639 Query: 128 GDYDQEQFADNQIPLLVIGTKLD 150 E A +P++++G K D Sbjct: 640 -----EDAAHETVPIMLVGNKAD 657 >gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] Length = 203 Score = 58.2 bits (139), Expect = 6e-09 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 9/102 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ L+ ++ T+G +R D E K +++WD Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI-----EGKKIKLQVWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 G K+ +Y GII V+D+T++KS +N++ W Sbjct: 65 AGQ----ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW 102 >gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo sapiens] Length = 731 Score = 57.0 bits (136), Expect = 1e-08 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 28/147 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K++ +G+S VGK+S + C+++ + TVG +D RV K + ++LWD Sbjct: 547 KIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVG--IDYRV---KTLNVDNSQVALQLWDT 601 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G + F+ +G+I ++DLT+K+S ++RRW Sbjct: 602 AGQ----ERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSV-------------- 643 Query: 128 GDYDQEQFADNQIPLLVIGTKLDQIHE 154 E+ +++P+L++G KLD E Sbjct: 644 -----EEAVGDRVPVLLLGNKLDNEKE 665 >gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene family [Homo sapiens] Length = 327 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ L+ ++ T+G +R D E K +++WD Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI-----EGKKIKLQVWDT 188 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 G K+ +Y GII +D+T++KS +N++ W Sbjct: 189 AGQ----ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNW 226 >gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] Length = 327 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ L+ ++ T+G +R D E K +++WD Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI-----EGKKIKLQVWDT 188 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 G K+ +Y GII +D+T++KS +N++ W Sbjct: 189 AGQ----ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNW 226 >gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] Length = 327 Score = 56.6 bits (135), Expect = 2e-08 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ L+ ++ T+G +R D E K +++WD Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI-----EGKKIKLQVWDT 188 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 G K+ +Y GII +D+T++KS +N++ W Sbjct: 189 AGQ----ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNW 226 >gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sapiens] Length = 205 Score = 55.8 bits (133), Expect = 3e-08 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 28/143 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGKS L+ + + T+G +R + + KT +++WD Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-----DGKTIKLQIWDT 67 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G ++ + +Y +GII V+D+T+++S N+++W E Sbjct: 68 AGQ----ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEI-------------- 109 Query: 128 GDYDQEQFADNQIPLLVIGTKLD 150 +++A + L++G K D Sbjct: 110 -----DRYASENVNKLLVGNKCD 127 >gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens] Length = 229 Score = 55.8 bits (133), Expect = 3e-08 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 30/145 (20%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--EKTYYIELW 65 K++V+GDS VGK+ L + C + T+G D++E E + I+LW Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGV-------DFRERAVEIDGERIKIQLW 87 Query: 66 DVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLV 125 D + G KS +Y +V+ ++FV+D+TN S +L W E Sbjct: 88 D---TAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEEC------------ 132 Query: 126 TNGDYDQEQFADNQIPLLVIGTKLD 150 ++ N IP +++G K D Sbjct: 133 ------KQHLLANDIPRILVGNKCD 151 >gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] Length = 201 Score = 55.1 bits (131), Expect = 5e-08 Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 28/143 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGKS L+ + + T+G +R + + KT +++WD Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-----DGKTIKLQIWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G ++ + +Y +GII V+D+T+++S N+++W E Sbjct: 65 AGQ----ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEI-------------- 106 Query: 128 GDYDQEQFADNQIPLLVIGTKLD 150 +++A + L++G K D Sbjct: 107 -----DRYASENVNKLLVGNKSD 124 >gi|34485711 Ras-related protein Rab-27A [Homo sapiens] Length = 221 Score = 54.3 bits (129), Expect = 9e-08 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 7 VKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT-----YY 61 +K L LGDSGVGK+S+++ + TVG + Y+ P+ T + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIH 69 Query: 62 IELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 ++LWD G +S F+ G + + DLTN++S N+R W Sbjct: 70 LQLWDTAGQ----ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNW 113 >gi|34485709 Ras-related protein Rab-27A [Homo sapiens] Length = 221 Score = 54.3 bits (129), Expect = 9e-08 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 7 VKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT-----YY 61 +K L LGDSGVGK+S+++ + TVG + Y+ P+ T + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIH 69 Query: 62 IELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 ++LWD G +S F+ G + + DLTN++S N+R W Sbjct: 70 LQLWDTAGQ----ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNW 113 >gi|34485706 Ras-related protein Rab-27A [Homo sapiens] Length = 221 Score = 54.3 bits (129), Expect = 9e-08 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 7 VKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT-----YY 61 +K L LGDSGVGK+S+++ + TVG + Y+ P+ T + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIH 69 Query: 62 IELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 ++LWD G +S F+ G + + DLTN++S N+R W Sbjct: 70 LQLWDTAGQ----ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNW 113 >gi|19923264 Ras-related protein Rab-27A [Homo sapiens] Length = 221 Score = 54.3 bits (129), Expect = 9e-08 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%) Query: 7 VKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT-----YY 61 +K L LGDSGVGK+S+++ + TVG + Y+ P+ T + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIH 69 Query: 62 IELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 ++LWD G +S F+ G + + DLTN++S N+R W Sbjct: 70 LQLWDTAGQ----ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNW 113 >gi|16933567 mel transforming oncogene [Homo sapiens] Length = 207 Score = 53.9 bits (128), Expect = 1e-07 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ ++ ++ T+G +R + + K +++WD Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-----DGKRIKLQIWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 G ++ +Y GI+ V+D+TN+KS N+R W Sbjct: 65 AGQ----ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW 102 >gi|31795535 RAB36, member RAS oncogene family [Homo sapiens] Length = 333 Score = 53.9 bits (128), Expect = 1e-07 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 11/111 (9%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYK-EGTPEEKTYYIELWD 66 KV+V+GD VGK+SL+H C+N + T+G VD + ++ G P Y +++WD Sbjct: 125 KVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIG--VDFEIERFEIAGIP----YSLQIWD 178 Query: 67 VGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRD 117 G K + +Y II DLT+ ++ ++ R+W +AL + Sbjct: 179 TAGQ----EKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALREN 225 >gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] Length = 213 Score = 53.5 bits (127), Expect = 2e-07 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 8/106 (7%) Query: 4 LDRVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIE 63 L + +++V+GDS VGKS L+ + + TVG R+ + + G K ++ Sbjct: 6 LYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG----KRIKLQ 61 Query: 64 LWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRW 109 +WD G S TRA + NSV G++ + D+TN++S QN+ W Sbjct: 62 IWDTAGQERFRSI---TRAYYRNSVGGLL-LFDITNRRSFQNVHEW 103 >gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sapiens] Length = 216 Score = 53.5 bits (127), Expect = 2e-07 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 29/148 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVL-GNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWD 66 K +++GDSGVGK+SL+ Q + + G+ S TVG +V T + +++WD Sbjct: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVV-----TVDGVRVKLQIWD 78 Query: 67 VGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVT 126 G +S +Y ++ ++D+TNK S N+R W E Sbjct: 79 TAGQ----ERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI------------- 121 Query: 127 NGDYDQEQFADNQIPLLVIGTKLDQIHE 154 ++A + ++++G K D E Sbjct: 122 ------HEYAQRDVVIMLLGNKADMSSE 143 >gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] Length = 207 Score = 53.5 bits (127), Expect = 2e-07 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 30/164 (18%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K+L++GDSGVGK+ L+ ++ T+G +R + + K +++WD Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIEL-----DGKKIKLQIWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G ++ +Y GI+ V+D+TN+KS N++ W Sbjct: 65 AGQ----ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI-------------- 106 Query: 128 GDYDQEQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDF 171 E+ A + + +++G K D KR R LA D+ Sbjct: 107 -----EEHASSDVERMILGNKCDM--NDKRQVSKERGEKLAIDY 143 >gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo sapiens] Length = 203 Score = 53.5 bits (127), Expect = 2e-07 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 9/123 (7%) Query: 1 MASLDRV-KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT 59 M S D + KVLV+GD+ VGK+SLV Q+ + TVG ++V + + + Sbjct: 1 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS----DYEI 56 Query: 60 YYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLV 119 ++LWD+ G S + ++Y + + + D+TN + N +RW + ++ + Sbjct: 57 VRLQLWDIAGQERFTSMTR----LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112 Query: 120 PTG 122 P G Sbjct: 113 PNG 115 >gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo sapiens] Length = 203 Score = 53.5 bits (127), Expect = 2e-07 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 9/123 (7%) Query: 1 MASLDRV-KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKT 59 M S D + KVLV+GD+ VGK+SLV Q+ + TVG ++V + + + Sbjct: 1 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWS----DYEI 56 Query: 60 YYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLV 119 ++LWD+ G S + ++Y + + + D+TN + N +RW + ++ + Sbjct: 57 VRLQLWDIAGQERFTSMTR----LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTL 112 Query: 120 PTG 122 P G Sbjct: 113 PNG 115 >gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] Length = 244 Score = 53.5 bits (127), Expect = 2e-07 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 39/200 (19%) Query: 6 RVKVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELW 65 +++V+++G GVGK+SL+ + TVG ++ + + K +++W Sbjct: 42 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-----KKIRLQIW 96 Query: 66 DVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLV 125 D G S + +Y S GII V+D+T K++ +L +W Sbjct: 97 DTAGQ----ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMI------------ 140 Query: 126 TNGDYDQEQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDFNPEEINLDCTNPRY 185 +++A LL++G KLD ET R +TR E+ T R+ Sbjct: 141 -------DKYASEDAELLLVGNKLD--CETDRE--ITRQ-------QGEKFAQQITGMRF 182 Query: 186 LAAGSSNAVKLSRFFDKVIE 205 A + + + F K+++ Sbjct: 183 CEASAKDNFNVDEIFLKLVD 202 >gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] Length = 256 Score = 53.5 bits (127), Expect = 2e-07 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 29/148 (19%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVL-GNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWD 66 KV+++GDSGVGK+ L+ L G TVG +V D +G + +++WD Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDV-DGVKVK----LQMWD 119 Query: 67 VGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVT 126 G +S +Y + ++ ++D+TNK S N++ W E Sbjct: 120 TAGQ----ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEI------------- 162 Query: 127 NGDYDQEQFADNQIPLLVIGTKLDQIHE 154 ++A + + L+++G K+D HE Sbjct: 163 ------HEYAQHDVALMLLGNKVDSAHE 184 >gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo sapiens] Length = 228 Score = 53.1 bits (126), Expect = 2e-07 Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 39/158 (24%) Query: 5 DRVKVLVLGDSGVGKSSLVHLLC----QNQVLGNPSWTVGCSVDVRVHDYKE-GTPEEKT 59 D VK++ LGDS VGKS L+ Q Q L + T+ YK T + KT Sbjct: 20 DNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTL----------YKHTATVDGKT 69 Query: 60 YYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLV 119 ++ WD G +S A +Y+ + I V D+ K + +NL W E R+ Sbjct: 70 ILVDFWDTAGQ----ERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL--REFR 123 Query: 120 PTGVLVTNGDYDQEQFADNQIPLLVIGTKLDQIHETKR 157 P +IP +V+ K+D I+ T++ Sbjct: 124 P------------------EIPCIVVANKIDDINVTQK 143 >gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo sapiens] Length = 228 Score = 53.1 bits (126), Expect = 2e-07 Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 39/158 (24%) Query: 5 DRVKVLVLGDSGVGKSSLVHLLC----QNQVLGNPSWTVGCSVDVRVHDYKE-GTPEEKT 59 D VK++ LGDS VGKS L+ Q Q L + T+ YK T + KT Sbjct: 20 DNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTL----------YKHTATVDGKT 69 Query: 60 YYIELWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLV 119 ++ WD G +S A +Y+ + I V D+ K + +NL W E R+ Sbjct: 70 ILVDFWDTAGQ----ERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTEL--REFR 123 Query: 120 PTGVLVTNGDYDQEQFADNQIPLLVIGTKLDQIHETKR 157 P +IP +V+ K+D I+ T++ Sbjct: 124 P------------------EIPCIVVANKIDDINVTQK 143 >gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] Length = 213 Score = 53.1 bits (126), Expect = 2e-07 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 11/118 (9%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K LV+G +G GKS L+H +N+ + + T+G RV + KT +++WD Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNV-----GGKTVKLQIWDT 64 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLV 125 G S +S +Y G + V+D+T++++ +L W +A R L ++V Sbjct: 65 AGQERFRSVTRS----YYRGAAGALLVYDITSRETYNSLAAWLTDA--RTLASPNIVV 116 >gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] Length = 217 Score = 53.1 bits (126), Expect = 2e-07 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 12/110 (10%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLG--NPSW--TVGCSVDVRVHDYKEGTPEEKTYYIE 63 +++V+GDS VGKS L+H Q + G +P+ TVG R+ + + G K ++ Sbjct: 10 RLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG----KRIKLQ 65 Query: 64 LWDVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEA 113 LWD G S TR+ + NSV G + V D+TN++S ++++ W EA Sbjct: 66 LWDTAGQERFRS---ITRSYYRNSVGGFL-VFDITNRRSFEHVKDWLEEA 111 >gi|4758996 Ras-related protein Rab-33A [Homo sapiens] Length = 237 Score = 52.4 bits (124), Expect = 3e-07 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 13/115 (11%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPE--EKTYYIELW 65 K++V+GDS VGK+ L C T+G D++E T E + +++W Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGV-------DFREKTVEIEGEKIKVQVW 90 Query: 66 DVGGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVP 120 D + G KS +Y +V+ ++FV+D+T S NL+ W ++ N VP Sbjct: 91 D---TAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMW-IQECNGHAVP 141 >gi|19923483 GTPase Rab14 [Homo sapiens] Length = 215 Score = 52.0 bits (123), Expect = 4e-07 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 9/130 (6%) Query: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDV 67 K +++GD GVGKS L+H + + + + T+G R+ + + +++WD Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV-----SGQKIKLQIWDT 67 Query: 68 GGSVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKSSQNLRRWSLEALNRDLVPTGVLVTN 127 G + +S +Y G + V+D+T + + +L W +A N T +++ Sbjct: 68 AGQERFRAVTRS----YYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 123 Query: 128 GDYDQEQFAD 137 D E D Sbjct: 124 NKADLEAQRD 133 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,697,553 Number of Sequences: 37866 Number of extensions: 358938 Number of successful extensions: 1152 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 108 Number of HSP's that attempted gapping in prelim test: 984 Number of HSP's gapped (non-prelim): 185 length of query: 236 length of database: 18,247,518 effective HSP length: 99 effective length of query: 137 effective length of database: 14,498,784 effective search space: 1986333408 effective search space used: 1986333408 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.