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Search of human proteins with 61966747
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61966747 hypothetical protein LOC389151 [Homo sapiens]
(265 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61966747 hypothetical protein LOC389151 [Homo sapiens] 539 e-154
gi|197927236 hypothetical protein LOC729627 [Homo sapiens] 473 e-134
gi|197927231 hypothetical protein LOC389152 [Homo sapiens] 438 e-123
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 46 4e-05
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 42 6e-04
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 40 0.002
gi|55741677 SET domain containing 1A [Homo sapiens] 39 0.004
gi|153792074 proline rich 12 [Homo sapiens] 39 0.005
gi|169172682 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169172911 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|169172807 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 38 0.008
gi|154800453 tastin isoform 1 [Homo sapiens] 38 0.010
gi|56549694 enabled homolog isoform a [Homo sapiens] 37 0.014
gi|39930375 enabled homolog isoform b [Homo sapiens] 37 0.014
gi|41281612 zinc finger protein 828 [Homo sapiens] 37 0.014
gi|236459851 ubinuclein 2 [Homo sapiens] 37 0.018
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 37 0.018
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 37 0.018
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 37 0.023
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 37 0.023
gi|108860690 chromosome 16 open reading frame 7 [Homo sapiens] 37 0.023
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 36 0.030
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 36 0.030
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 36 0.030
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 36 0.030
gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1 is... 36 0.040
gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1 ... 36 0.040
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 36 0.040
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 36 0.040
>gi|61966747 hypothetical protein LOC389151 [Homo sapiens]
Length = 265
Score = 539 bits (1389), Expect = e-154
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 1 MVSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSI 60
MVSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSI
Sbjct: 1 MVSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSI 60
Query: 61 VVLAAGCALRVPLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSA 120
VVLAAGCALRVPLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSA
Sbjct: 61 VVLAAGCALRVPLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSA 120
Query: 121 GLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYP 180
GLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYP
Sbjct: 121 GLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYP 180
Query: 181 SSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVG 240
SSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVG
Sbjct: 181 SSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVG 240
Query: 241 SPGPHARSPLPERPPCKARRRLFQA 265
SPGPHARSPLPERPPCKARRRLFQA
Sbjct: 241 SPGPHARSPLPERPPCKARRRLFQA 265
>gi|197927236 hypothetical protein LOC729627 [Homo sapiens]
Length = 266
Score = 473 bits (1218), Expect = e-134
Identities = 239/265 (90%), Positives = 243/265 (91%), Gaps = 1/265 (0%)
Query: 1 MVSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSI 60
M SRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPR APSLEDPAG PAV ALTSI
Sbjct: 1 MGSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRVAPSLEDPAGTPAVGALTSI 60
Query: 61 VVLAAGCALRVPLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSA 120
VVLAAGCALRVPLDDVDLVLE PTSILRVSL GHTLILIPEVLLSSVDERSGAQ DSSA
Sbjct: 61 VVLAAGCALRVPLDDVDLVLELPPTSILRVSLDGHTLILIPEVLLSSVDERSGAQDDSSA 120
Query: 121 GLEVDVFLGAVREDVVVELE-FCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLY 179
GLEVDVFLGA+REDVVVE E FCASVPEIAAQEEAYEEDADPEFPEL+MDS GSAAGLY
Sbjct: 121 GLEVDVFLGALREDVVVEQEVFCASVPEIAAQEEAYEEDADPEFPELQMDSAAGSAAGLY 180
Query: 180 PSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCV 239
S+RSMF PYREGPIPEPCALAPNPSSE SP P FD EFRLLEPVPSSPLQPLPPSP V
Sbjct: 181 SSARSMFSPYREGPIPEPCALAPNPSSEGHSPGPFFDPEFRLLEPVPSSPLQPLPPSPRV 240
Query: 240 GSPGPHARSPLPERPPCKARRRLFQ 264
GSPGPHA PLP+RPPCKARRRLFQ
Sbjct: 241 GSPGPHAHPPLPKRPPCKARRRLFQ 265
>gi|197927231 hypothetical protein LOC389152 [Homo sapiens]
Length = 262
Score = 438 bits (1127), Expect = e-123
Identities = 226/264 (85%), Positives = 232/264 (87%), Gaps = 3/264 (1%)
Query: 1 MVSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSI 60
M SRP SPSA APWWGQQPGGPGPAKR RLEEPAGPE RAAPS EDPAG PAVDALTS+
Sbjct: 1 MGSRPCSPSACLAPWWGQQPGGPGPAKRSRLEEPAGPESRAAPSPEDPAGTPAVDALTSM 60
Query: 61 VVLAAGCALRVPLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSA 120
VVL AGCALRVPL+DVDLVLE AP S+LRVSLGGHTLI+IPEVLLSSVDE SGAQ D SA
Sbjct: 61 VVLDAGCALRVPLEDVDLVLELAPMSVLRVSLGGHTLIVIPEVLLSSVDECSGAQGDWSA 120
Query: 121 GLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYP 180
GLEVDVFLGA EDVVVE E CASVPEIAA+EEAYEEDAD EFPEL MDS GSAAGLYP
Sbjct: 121 GLEVDVFLGAHGEDVVVEQEVCASVPEIAAEEEAYEEDADSEFPELWMDSAAGSAAGLYP 180
Query: 181 SSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVG 240
S+RSMF PYREGPI PCALAPNPSSERRSPRPIFDLEF LLEPVPSSPLQPLPPSP
Sbjct: 181 SARSMFSPYREGPIRGPCALAPNPSSERRSPRPIFDLEFHLLEPVPSSPLQPLPPSP--- 237
Query: 241 SPGPHARSPLPERPPCKARRRLFQ 264
SPGPHAR LPERPPCK RRRLFQ
Sbjct: 238 SPGPHARPELPERPPCKVRRRLFQ 261
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 45.8 bits (107), Expect = 4e-05
Identities = 68/257 (26%), Positives = 88/257 (34%), Gaps = 36/257 (14%)
Query: 18 QQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVD 77
+ P P P + RL P P + P + PA P D+L S+ PL++
Sbjct: 677 ESPTSP-PPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL-----------PLEESP 724
Query: 78 LVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSG----AQHDSSAGLEVDVFLGAVRE 133
L+ P + S G H E LS E A+ + + L AV E
Sbjct: 725 LLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPE 784
Query: 134 DVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPS-SRSMFIPYREG 192
+ + + A P ++ Q E E P L SP L P S P E
Sbjct: 785 EPHLSPQ--AEGPHLSPQPEELHLSPQTEEPHL---SPVPEEPCLSPQPEESHLSPQSEE 839
Query: 193 PI----PEPCALAPNPSSERRSPRPI----------FDLEFRLLEPVPSSPLQPLPPSPC 238
P PE L+P SPRP E L P L PL P
Sbjct: 840 PCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPA 899
Query: 239 VGSPGPHARSPLPERPP 255
+ PG SPLPE P
Sbjct: 900 LSEPGEPPLSPLPEELP 916
Score = 42.4 bits (98), Expect = 4e-04
Identities = 38/112 (33%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPS 205
PE + +EE PE SP A+ L P + P PE ++P P
Sbjct: 594 PEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPM----SPPPEESPMSPPPE 649
Query: 206 SERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHAR--SPLPERPP 255
R SP P+ RL P SPL P PP SP P A SP PE P
Sbjct: 650 VSRLSPLPVVS---RLSPPPEESPLSP-PPEESPTSPPPEASRLSPPPEDSP 697
Score = 40.0 bits (92), Expect = 0.002
Identities = 31/76 (40%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 183 RSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSP 242
R + P E P P P LAP+P+S P E L EP SPL PL SP P
Sbjct: 4904 RQLSAPPPEEPSPPPSPLAPSPASPPTEPLVELPTE-PLAEPPVPSPL-PLASSPESARP 4961
Query: 243 GPHARSP---LPERPP 255
P AR P RPP
Sbjct: 4962 KPRARPPEEGEDSRPP 4977
Score = 37.4 bits (85), Expect = 0.014
Identities = 36/112 (32%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPS 205
PE + +EE PE SP A+ L P PE ++P P
Sbjct: 540 PEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPP-------------PEESPMSPPPE 586
Query: 206 SERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHAR--SPLPERPP 255
SP P RL P SPL P PP SP P A SP PE P
Sbjct: 587 ESPMSPPPEAS---RLFPPFEESPLSP-PPEESPLSPPPEASRLSPPPEDSP 634
Score = 37.0 bits (84), Expect = 0.018
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 19/115 (16%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFI--PYREGPI---PEPCAL 200
PE + EE PE SP P ++ + P E P+ PE L
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503
Query: 201 APNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPP 255
+P P S SP LE P SP + PPSP + +P SP PE P
Sbjct: 504 SPPPESSPFSP----------LEESPLSPPEESPPSPALETP----LSPPPEASP 544
Score = 35.0 bits (79), Expect = 0.068
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFI-PYREGP----IPEPCAL 200
P++ + E PE P L SP L P + + P E P +PE L
Sbjct: 732 PQLCPRSEGPHLSPRPEEPHL---SPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHL 788
Query: 201 APNPSSERRSPRPIFDLEFRLLEPVPSSP-LQPLPPSPCVGSPGPHARSPLPE-RPPCKA 258
+P SP+P E L P P L P+P PC+ SP P P+ PC +
Sbjct: 789 SPQAEGPHLSPQP----EELHLSPQTEEPHLSPVPEEPCL-SPQPEESHLSPQSEEPCLS 843
Query: 259 RR 260
R
Sbjct: 844 PR 845
Score = 31.2 bits (69), Expect = 0.98
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 200 LAPNPSS-ERRSPRPIFDLEFRLLEPVPSSPLQPLPPS-PCVGSPG----PHARSPLPER 253
L P S E +SP L R EP P+ L P PPS P + PG P+A+ PL R
Sbjct: 2331 LTPRASQVEPQSP----GLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPR 2386
Query: 254 P 254
P
Sbjct: 2387 P 2387
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 188 PYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGP--- 244
P E P+ E L P P SP P E P P + PP SP P
Sbjct: 428 PQLEAPLNEEMPLLPPPEESPLSPPP----EESPTSPPPEASRLSPPPEELPASPLPEAL 483
Query: 245 HARSPLPERP 254
H PL E P
Sbjct: 484 HLSRPLEESP 493
Score = 28.5 bits (62), Expect = 6.3
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 13/67 (19%)
Query: 191 EGPIPEPCALAP-NPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSP 249
E P+ P P +P E P EPVP L P P SP VG P P
Sbjct: 970 ESPLAAPILETPISPPPEANCTDP---------EPVPPMILPPSPGSP-VGPASPILMEP 1019
Query: 250 LPERPPC 256
LP P C
Sbjct: 1020 LP--PQC 1024
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 42.0 bits (97), Expect = 6e-04
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 24/154 (15%)
Query: 123 EVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEF----------------PEL 166
E+D+ +GA RE A V E A+EE E+A P++ P L
Sbjct: 272 ELDM-VGAGREAKRRRKTLDAEVVEKPAKEETVVENATPDYAAGLVSTQKLGSLNNEPAL 330
Query: 167 RMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVP 226
S S + P+S +IP E P A P E +P P +F+ P+
Sbjct: 331 PSTSYLPSTPSVVPASS--YIPSSETPPAPSSREASRPPEEPSAPSPTLPAQFKQRAPMY 388
Query: 227 SSPLQPLPPSPCVGS-----PGPHARSPLPERPP 255
+S L P P+P + P A +P + PP
Sbjct: 389 NSGLSPATPTPAAPTSPLTPTTPPAVAPTTQTPP 422
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 40.0 bits (92), Expect = 0.002
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 170 SPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSP 229
SP P S P R P PC +P +RRSP P P PS
Sbjct: 335 SPLSQRHSPAPQCPSPSPPARAAP---PCPPCQSPVPQRRSPVP----------PCPSPQ 381
Query: 230 LQPLPPSPCVGSPGPHARSPLPERPPCKA 258
+ P SP SP P RSP+P P C++
Sbjct: 382 QRRSPASPSCPSPVPQRRSPVP--PSCQS 408
Score = 39.7 bits (91), Expect = 0.003
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 203 NPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPPCKARR 260
+P S+R SP P P PS P + PP P SP P RSP+P P + RR
Sbjct: 335 SPLSQRHSPAPQC--------PSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRR 384
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 164 PELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLE 223
P+ SP AA P +S +P R P+P PC P+P R P
Sbjct: 345 PQCPSPSPPARAAPPCPPCQSP-VPQRRSPVP-PC---PSPQQRRSPASPSCP------S 393
Query: 224 PVPSSPLQPLPPSPCVGSPGPHARSPLPERPPCKA 258
PVP P+PPS SP P RSP+P P C A
Sbjct: 394 PVPQRR-SPVPPS--CQSPSPQRRSPVP--PSCPA 423
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 39.3 bits (90), Expect = 0.004
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 188 PYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPV-PSSPLQPLPPS-------PCV 239
P RE P+P P + P ER + P+ L + P P+ P + PPS P
Sbjct: 1080 PPREVPVPTPAPVEV-PVPERVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPA 1138
Query: 240 GSPGPHAR------SPLPERPPCKARRR 261
G P P R SP+P PP K RR+
Sbjct: 1139 GPPAPAPRPDERPSSPIPLLPPPKKRRK 1166
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.9 bits (89), Expect = 0.005
Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 13/120 (10%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPY------REGPIPEPCA 199
P +A ++ D P P + P GL PS+ S P + P P P
Sbjct: 1408 PPLAGPKDTSTPDGPPLAPAAAVPGPP-PLPGL-PSANSNGTPEPPLLEEKPPPTPPPAP 1465
Query: 200 LA-PNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPPCKA 258
P P P+P L+ P PSSP PP P P P SP P PP A
Sbjct: 1466 TPQPQPPPPPPPPQPALPSPPPLVAPTPSSP----PPPPLPPPPPPAMPSPPPPPPPAAA 1521
Score = 31.6 bits (70), Expect = 0.75
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 193 PIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPC---VGSPGPHARSP 249
P P P +AP PSS P P P P+ P P PP P + +P +P
Sbjct: 1483 PSPPPL-VAPTPSSPPPPPLPP--------PPPPAMPSPPPPPPPAAAPLAAPPEEPAAP 1533
Query: 250 LPERPPCKARRRLFQA 265
PE P R L A
Sbjct: 1534 SPEDPELPDTRPLHLA 1549
>gi|169172682 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 24 GPAKRLRLEEPAG-PEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVDLVLEP 82
GP+ + +G P + SLE P ++VL G +R+ L++V L+L
Sbjct: 43 GPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL-- 100
Query: 83 APTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFC 142
AP ++L+++L L+++PE +L S D G Q + +++ + +V + LEF
Sbjct: 101 APETVLQLTLENTVLVIVPEHVLRSED---GLQ----SPVQIQYIIPSVDD---FSLEFH 150
Query: 143 ASVPEIAAQEE-------AYEEDADPEFPELRMDSPTGSAAGLYPS 181
A +I+ A E A P + + M AG+ PS
Sbjct: 151 AQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPS 196
>gi|169172911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 24 GPAKRLRLEEPAG-PEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVDLVLEP 82
GP+ + +G P + SLE P ++VL G +R+ L++V L+L
Sbjct: 43 GPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL-- 100
Query: 83 APTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFC 142
AP ++L+++L L+++PE +L S D G Q + +++ + +V + LEF
Sbjct: 101 APETVLQLTLENTVLVIVPEHVLRSED---GLQ----SPVQIQYIIPSVDD---FSLEFH 150
Query: 143 ASVPEIAAQEE-------AYEEDADPEFPELRMDSPTGSAAGLYPS 181
A +I+ A E A P + + M AG+ PS
Sbjct: 151 AQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPS 196
>gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]
Length = 277
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 24 GPAKRLRLEEPAG-PEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVDLVLEP 82
GP+ + +G P + SLE P ++VL G +R+ L++V L+L
Sbjct: 43 GPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL-- 100
Query: 83 APTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFC 142
AP ++L+++L L+++PE +L S D G Q + +++ + +V + LEF
Sbjct: 101 APETVLQLTLENTVLVIVPEHVLRSED---GLQ----SPVQIQYIIPSVDD---FSLEFH 150
Query: 143 ASVPEIAAQEE-------AYEEDADPEFPELRMDSPTGSAAGLYPS 181
A +I+ A E A P + + M AG+ PS
Sbjct: 151 AQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPS 196
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 38.1 bits (87), Expect = 0.008
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 33/99 (33%)
Query: 188 PYREGP-IPEPC---ALAPNPSSERRS------------PRPIFDLE---FRLLEPVP-- 226
P +GP +P P ++ P+P+S R S P P D+E F +EP+P
Sbjct: 1511 PSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPP 1570
Query: 227 ----------SSPLQPLPPSPCVGSPGPHARSPLPERPP 255
SPL P PP P +P P +PLP PP
Sbjct: 1571 LEFSNSFEKPESPLTPGPPHPLPDTPAP--ATPLPPVPP 1607
Score = 33.1 bits (74), Expect = 0.26
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 193 PIPEPC-ALAPNPSSERRSPRPIFDLEFRLL----EPVPSSPLQPLPPSPCVGSPGPHAR 247
P+P P A AP S +D E L P P P PP+P +P P A
Sbjct: 1604 PVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPA--APAPAAP 1661
Query: 248 SPLPERPP 255
P P+ PP
Sbjct: 1662 QPGPDPPP 1669
Score = 28.5 bits (62), Expect = 6.3
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
Query: 182 SRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGS 241
SRS+ +P E P P P P PVPSS + L PSP G
Sbjct: 909 SRSLSVPGSEDIPPPPTTSPPEPPYST--------------PPVPSSSGR-LTPSPRGGP 953
Query: 242 PGPHARSPLPERPP 255
P + PLP P
Sbjct: 954 FNPGSGGPLPASSP 967
Score = 28.5 bits (62), Expect = 6.3
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 171 PTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPL 230
P ++A +Y +RS R+GP+ + + P P P P+SP
Sbjct: 1089 PRAASAAMYVPARSG--RGRKGPLVKQTKVEGEPQKGGGLPPA----------PSPTSPA 1136
Query: 231 QPLPPSPCVGSPGPHARSPLP 251
P PP P V +P P+P
Sbjct: 1137 SPQPP-PAVAAPSEKNSIPIP 1156
Score = 28.5 bits (62), Expect = 6.3
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 170 SPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRS-------------PRPIFD 216
SPT A+ P + + PIP AP+ SS RS P P
Sbjct: 1131 SPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGG 1190
Query: 217 LEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSP 249
P P+ + P+PPSP SP P SP
Sbjct: 1191 GGGGGSSPSPAPAMSPVPPSP---SPVPTPASP 1220
Score = 28.5 bits (62), Expect = 6.3
Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 3 SRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSIVV 62
S P P P G GG P+ + P P P P+ P+G +D +
Sbjct: 1176 STEAEPPTQPEPTGGGGGGGSSPSPAPAMS-PVPPSPSPVPTPASPSGPATLDFTSQFGA 1234
Query: 63 LAAGCALR 70
G A R
Sbjct: 1235 ALVGAARR 1242
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 37.7 bits (86), Expect = 0.010
Identities = 40/136 (29%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 141 FCASVPEI---AAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEP 197
FC S PEI + QE+ + P ++S S + SSR + +PEP
Sbjct: 526 FCRSEPEIPEPSLQEQLEVPEPYPPAEPRPLESCCRSEPEIPESSRQ-----EQLEVPEP 580
Query: 198 CALA---PNPSSERRSPR-PIFDLEFRLLEPVPSSPLQPLPPSPCV----GSPGPHARSP 249
C A P S R P P + +L P P P +P P P G PGP R
Sbjct: 581 CPPAEPRPLESYCRIEPEIPESSRQEQLEVPEPCPPAEPGPLQPSTQGQSGPPGPCPRVE 640
Query: 250 LPERPPCKARRRLFQA 265
L PC R ++
Sbjct: 641 LGASEPCTLEHRSLES 656
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 37.4 bits (85), Expect = 0.014
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 151 QEEAYEEDADPEFPELRMDSPTGSAA----GLYPSSRSMFIPYREGPIPEPCALAPNPSS 206
+E A P E ++S G ++ GL +S+ P ++G + P A P P
Sbjct: 260 RERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPP-- 317
Query: 207 ERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPP 255
P P + + P P P P PP P G P P PLP + P
Sbjct: 318 ----PLPPGPAQASVALPPPPGPPPP-PPLPSTGPPPPPPPPPLPNQVP 361
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 180 PSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPS 236
P+ S+ +P GP P P P PS+ P P L ++ P P P PLP S
Sbjct: 323 PAQASVALPPPPGPPPPP----PLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPAS 375
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 37.4 bits (85), Expect = 0.014
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 151 QEEAYEEDADPEFPELRMDSPTGSAA----GLYPSSRSMFIPYREGPIPEPCALAPNPSS 206
+E A P E ++S G ++ GL +S+ P ++G + P A P P
Sbjct: 260 RERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPP-- 317
Query: 207 ERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPP 255
P P + + P P P P PP P G P P PLP + P
Sbjct: 318 ----PLPPGPAQASVALPPPPGPPPP-PPLPSTGPPPPPPPPPLPNQVP 361
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 180 PSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPS 236
P+ S+ +P GP P P P PS+ P P L ++ P P P PLP S
Sbjct: 323 PAQASVALPPPPGPPPPP----PLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPAS 375
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 37.4 bits (85), Expect = 0.014
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 144 SVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPN 203
S+P ++ + + PE P+ PT S+ P + P+P P P
Sbjct: 126 SIPALSMETQKLGSVLSPESPK-----PTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPA 180
Query: 204 PSSERRSPRPIFDLEFRLLEPVPS-SPLQPLPPSP-----CVGSPGPHARSPLPE 252
S P+ + E + L PVPS P +P P SP + +P P +S PE
Sbjct: 181 SVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPE 235
Score = 35.4 bits (80), Expect = 0.052
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 146 PEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPS 205
P AA E+ + A PE R SP+ S P P R P P + P P
Sbjct: 259 PSPAASPES-RKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPP 317
Query: 206 SERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPP 255
SPRP ++ S P +P P+P V SPGP P+P P
Sbjct: 318 G---SPRP-----WKSNPSASSGPWKPAKPAPSV-SPGPW--KPIPSVSP 356
Score = 31.2 bits (69), Expect = 0.98
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 164 PELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIF--DLEFRL 221
PEL+ +P S P+S S P + P+ E LAP PS E + P P+ ++ L
Sbjct: 165 PELQ--TPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATL 222
Query: 222 LEPVPSS----------PLQPLPPSPCV-GSPGPHARSPLPERPPCKARR 260
P P P P SP + SP P SP K+ R
Sbjct: 223 SNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSAR 272
Score = 30.0 bits (66), Expect = 2.2
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 188 PYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLL---------EPVPSSPLQPLPPSPC 238
P + P+PE + N S+E +S P +E + L +P P +PL+P P
Sbjct: 105 PVKSPPLPEHQKIPCN-SAEPKSI-PALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSV 162
Query: 239 VGSPGPHARSPLPERPPCK 257
V P ++PLP P K
Sbjct: 163 VS---PELQTPLPSPEPSK 178
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 37.0 bits (84), Expect = 0.018
Identities = 35/105 (33%), Positives = 42/105 (40%), Gaps = 20/105 (19%)
Query: 151 QEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRS 210
+ + Y E A E P R +P A P SR +P RE EP S +R
Sbjct: 39 EPQPYREPARAEPPAPREPAPRSDAQ---PPSREKPLPQREVSRAEPPM-----SLQREP 90
Query: 211 PRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERPP 255
PRP EP P P PL P P S +R+ P RPP
Sbjct: 91 PRP---------EPPPPFPPLPLQPPPPRESA---SRAEQPPRPP 123
Score = 29.6 bits (65), Expect = 2.8
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 193 PIPEPCALAPNPSSERRSPRPIFDLEFR-LLEPVPSSPLQPLPPSPCVGSPGPHARSPLP 251
P+ A P P E PR LE + EP + P P P+P + P PLP
Sbjct: 14 PVRRREAEYPGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAPRSDAQPPSREKPLP 73
Query: 252 ERPPCKA 258
+R +A
Sbjct: 74 QREVSRA 80
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 37.0 bits (84), Expect = 0.018
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 188 PYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLE--PVPSSPLQPLPPSPCVGSPGPH 245
P +E PIP+P L P+ +E +P + D+ + + P+P +PL P P P +P P
Sbjct: 1814 PGQESPIPDP-KLMPHMKNEPTTPSWLADIPPWVPKDRPLPPAPLSPAPGPP---TPAPE 1869
Query: 246 ARSPLP 251
+ +P P
Sbjct: 1870 SHTPAP 1875
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 37.0 bits (84), Expect = 0.018
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 5 PRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDP 52
P P+A P P G + G PGP + P GP+P P L P G P
Sbjct: 185 PPPPAAVPGPGPGPKQG-PGPGGPKGGKMPGGPKPGGGPGLSTPGGHP 231
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 36.6 bits (83), Expect = 0.023
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 107 SVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPEL 166
S ++ G Q + E + +E+ VE E+A +EE DA E PE
Sbjct: 558 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVE----EKSEEVATKEELVA-DAKVEKPEK 612
Query: 167 RMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSER-RSPRPIFDLEFRLLEPV 225
P +S + P+P+ +P E+ +SP P +E + PV
Sbjct: 613 AKS----------PVPKSPVEEKGKSPVPK------SPVEEKGKSPVPKSPVEEKGKSPV 656
Query: 226 PSSPLQPLPPSPCVGSP-GPHARSPLPERPPCKARRR 261
P SP++ SP SP A+SP+P+ P +A+ +
Sbjct: 657 PKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK 693
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 36.6 bits (83), Expect = 0.023
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 107 SVDERSGAQHDSSAGLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPEL 166
S ++ G Q + E + +E+ VE E+A +EE DA E PE
Sbjct: 182 SSEKEEGEQEEGETEAEAEGEEAEAKEEKKVE----EKSEEVATKEELVA-DAKVEKPEK 236
Query: 167 RMDSPTGSAAGLYPSSRSMFIPYREGPIPEPCALAPNPSSER-RSPRPIFDLEFRLLEPV 225
P +S + P+P+ +P E+ +SP P +E + PV
Sbjct: 237 AKS----------PVPKSPVEEKGKSPVPK------SPVEEKGKSPVPKSPVEEKGKSPV 280
Query: 226 PSSPLQPLPPSPCVGSP-GPHARSPLPERPPCKARRR 261
P SP++ SP SP A+SP+P+ P +A+ +
Sbjct: 281 PKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK 317
>gi|108860690 chromosome 16 open reading frame 7 [Homo sapiens]
Length = 631
Score = 36.6 bits (83), Expect = 0.023
Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 18/88 (20%)
Query: 176 AGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPSS------- 228
+ LYP+ + P P C PNP S R RP L L P PS+
Sbjct: 297 SALYPA-----VSRAAAPAPGCCPPTPNPGSRRL--RPSQSLHCMLSPPEPSAAPRPQDS 349
Query: 229 -PLQPLPPSPCVGSPGP--HARSPLPER 253
P PL P P VGSP P S LP++
Sbjct: 350 PPTPPLQPGP-VGSPSPLGDTASGLPDK 376
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 36.2 bits (82), Expect = 0.030
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 138 ELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEP 197
+L+ A++ E++ Q+E +++ F E+ G A+ L + +S P + P+ P
Sbjct: 247 QLDMDATLEELSVQQETEDQNYGI-FLEMMEARSRGHASPLAANGQSPS-PGSQSPVV-P 303
Query: 198 CALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQP---LPPSPCVGSPGPHARSPLPERP 254
SS +P+P L P P+ P LPP C +P P R + RP
Sbjct: 304 AGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAP--RRSIISRP 361
Query: 255 P 255
P
Sbjct: 362 P 362
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 36.2 bits (82), Expect = 0.030
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 197 PCAL--APNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERP 254
PC L P P R+ PRP P P PL P PP P + P P P RP
Sbjct: 18 PCGLWSPPPPLPPRKPPRP----------PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP 67
Query: 255 P 255
P
Sbjct: 68 P 68
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 36.2 bits (82), Expect = 0.030
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 197 PCAL--APNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERP 254
PC L P P R+ PRP P P PL P PP P + P P P RP
Sbjct: 18 PCGLWSPPPPLPPRKPPRP----------PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP 67
Query: 255 P 255
P
Sbjct: 68 P 68
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 36.2 bits (82), Expect = 0.030
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 197 PCAL--APNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPGPHARSPLPERP 254
PC L P P R+ PRP P P PL P PP P + P P P RP
Sbjct: 18 PCGLWSPPPPLPPRKPPRP----------PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP 67
Query: 255 P 255
P
Sbjct: 68 P 68
>gi|5454168 RanBP-type and C3HC4-type zinc finger containing 1
isoform 1 [Homo sapiens]
Length = 468
Score = 35.8 bits (81), Expect = 0.040
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 199 ALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCV-GSPGPHARSPLPERPP 255
+L P R R + DL F+ L P PL+P PP P V PG +PE PP
Sbjct: 95 SLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPP 152
>gi|144953898 RanBP-type and C3HC4-type zinc finger containing 1
isoform 2 [Homo sapiens]
Length = 510
Score = 35.8 bits (81), Expect = 0.040
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 199 ALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCV-GSPGPHARSPLPERPP 255
+L P R R + DL F+ L P PL+P PP P V PG +PE PP
Sbjct: 137 SLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPP 194
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 35.8 bits (81), Expect = 0.040
Identities = 56/240 (23%), Positives = 76/240 (31%), Gaps = 37/240 (15%)
Query: 19 QPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSIVVLAAGCALRVPLDDVDL 78
QP GP + P P P AP P P+V ++ S + + + V
Sbjct: 639 QPMGPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPM-PSAGPVPS 697
Query: 79 VLEPAPTSILRVSLGGHTLILIPEVLLSSVD-ERSGAQHDSSAGLEVDVFLGAVREDVVV 137
PT+ + L L+ +P LL + R+G+ D G +
Sbjct: 698 ARPGPPTTANHLGLSVPGLVSVPPRLLPGPENHRAGSNEDPILAPS-----GTPPPTIPP 752
Query: 138 ELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTGSAAGLYPSSRSMFIPYREGPIPEP 197
+ F VP A EE +D E L DS +PE
Sbjct: 753 DETFGGRVPRPAFVHYDKEEASDVEI-SLESDSDDSVVI-----------------VPEG 794
Query: 198 CALAPNPSSERRSPRPIFDLEFRLLEPVPSSPLQPLPPSPCVGSPG--PHARSPLPERPP 255
P P +P PI P+ P PP P P P A PLP PP
Sbjct: 795 LPPLPPPPPSGATPPPI----------APTGPPTASPPVPAKEEPEELPAAPGPLPPPPP 844
Score = 34.7 bits (78), Expect = 0.088
Identities = 66/256 (25%), Positives = 84/256 (32%), Gaps = 53/256 (20%)
Query: 2 VSRPRSPSAFPAPWWGQQPGGPGPAKRLRLEEPAGPEPRAAPSLEDPAGDPAVDALTSIV 61
V P +PS F AP + PGP + AGP P A P P+ P A
Sbjct: 651 VPPPEAPSPFRAPPFHP----PGPMPSVGSMPSAGPMPSAGPM---PSAGPVPSARPGPP 703
Query: 62 VLAAGCALRVP-LDDVDLVLEPAPTS---------ILRVSLGGHTLILIPEVLLSSVDER 111
A L VP L V L P P + IL S I E V
Sbjct: 704 TTANHLGLSVPGLVSVPPRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGRVPRP 763
Query: 112 SGAQHDSSAGLEVDVFLGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSP 171
+ +D +V++ L + +D VV VPE P L P
Sbjct: 764 AFVHYDKEEASDVEISLESDSDDSVV------IVPE--------------GLPPLPPPPP 803
Query: 172 TGSA----AGLYPSSRSMFIPYREGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPVPS 227
+G+ A P + S +P +E P P A P P P PVP
Sbjct: 804 SGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPP------------PVPG 851
Query: 228 SPLQPLPPSPCVGSPG 243
P P G+PG
Sbjct: 852 PVTLPPPQLVPEGTPG 867
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 35.8 bits (81), Expect = 0.040
Identities = 53/213 (24%), Positives = 72/213 (33%), Gaps = 41/213 (19%)
Query: 72 PLDDVDLVLEPAPTSILRVSLGGHTLILIPEVLLSSVDERSGAQHDSSAG--LEVDVF-- 127
PL PAP + GGH PE LS + + D+ +G L +D +
Sbjct: 1812 PLTPAQPAPAPAPATTTGTRAGGH-----PEEPLSRLSRKRKLLEDTESGKTLLLDAYRV 1866
Query: 128 -----------LGAVREDVVVELEFCASVPEIAAQEEAYEEDADPEFPELRMDSPTG-SA 175
LG V + V E AA E+A + F ++ + + A
Sbjct: 1867 WQQGQKGVAYDLGRVERIMSETYMLIKQVDEEAALEQAVK------FCQVHLGAAAQRQA 1920
Query: 176 AGLYPS-------SRSMFIPYR---EGPIPEPCALAPNPSSERRSPRPIFDLEFRLLEPV 225
+G P+ SR F P P P P PS PRP ++
Sbjct: 1921 SGDTPTTPKHPKDSRENFFPVTVVPTAPDPVPADSVQRPSDAHTKPRPALAAATTIITCP 1980
Query: 226 PSSPLQPLPPSPCVGSPGPHARSPLPERPPCKA 258
PS+ L S G P PH PE P A
Sbjct: 1981 PSASASTLDQSKDPGPPRPHR----PEATPSMA 2009
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,375,257
Number of Sequences: 37866
Number of extensions: 1014458
Number of successful extensions: 7110
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 398
Number of HSP's that attempted gapping in prelim test: 5585
Number of HSP's gapped (non-prelim): 1759
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.