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Search of human proteins with 13569848
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569848 cell cycle progression 2 protein isoform 2 [Homo
sapiens]
(521 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40217810 cell cycle progression 2 protein isoform 2 [Homo sap... 1036 0.0
gi|13569848 cell cycle progression 2 protein isoform 2 [Homo sap... 1036 0.0
gi|40217812 cell cycle progression 2 protein isoform 1 [Homo sap... 561 e-160
gi|40068497 FAST kinase domains 3 [Homo sapiens] 77 3e-14
gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo... 76 7e-14
gi|188497683 FAST kinase domains 1 [Homo sapiens] 69 1e-11
gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Hom... 64 3e-10
gi|11141903 FAST kinase domains 5 [Homo sapiens] 37 0.044
gi|224593756 hypothetical protein LOC164127 [Homo sapiens] 37 0.057
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 35 0.22
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.28
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 34 0.28
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 33 0.83
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 33 0.83
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 1.1
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 32 1.4
gi|239743173 PREDICTED: similar to solute carrier family 29 (nuc... 31 2.4
gi|239508837 PREDICTED: similar to solute carrier family 29 (nuc... 31 2.4
gi|55953117 ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H... 31 3.1
gi|47578107 delangin isoform B [Homo sapiens] 31 3.1
gi|47578105 delangin isoform A [Homo sapiens] 31 3.1
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 31 3.1
gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo ... 30 4.1
gi|27881506 ATP-binding cassette, sub-family F, member 2 isoform... 30 4.1
gi|10947137 ATP-binding cassette, sub-family F, member 2 isoform... 30 4.1
gi|9945318 MAX binding protein [Homo sapiens] 30 4.1
gi|52353320 FSHD region gene 2 [Homo sapiens] 30 4.1
gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... 30 4.1
gi|50233787 nuclear protein in testis [Homo sapiens] 30 4.1
gi|124487405 FSHD region gene 2 family, member B [Homo sapiens] 30 4.1
>gi|40217810 cell cycle progression 2 protein isoform 2 [Homo
sapiens]
Length = 521
Score = 1036 bits (2680), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
Sbjct: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
Query: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
Sbjct: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
Query: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
Sbjct: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
Query: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
Sbjct: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
Query: 241 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV 300
RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
Sbjct: 241 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV 300
Query: 301 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG 360
DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
Sbjct: 301 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG 360
Query: 361 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS 420
PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
Sbjct: 361 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS 420
Query: 421 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV 480
DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
Sbjct: 421 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV 480
Query: 481 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 521
AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
Sbjct: 481 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 521
>gi|13569848 cell cycle progression 2 protein isoform 2 [Homo
sapiens]
Length = 521
Score = 1036 bits (2680), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
Sbjct: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
Query: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
Sbjct: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
Query: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
Sbjct: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
Query: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
Sbjct: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
Query: 241 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV 300
RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV
Sbjct: 241 RLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQV 300
Query: 301 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG 360
DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG
Sbjct: 301 DLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSG 360
Query: 361 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS 420
PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS
Sbjct: 361 PLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDS 420
Query: 421 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV 480
DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV
Sbjct: 421 DGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIV 480
Query: 481 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 521
AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
Sbjct: 481 AAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 521
>gi|40217812 cell cycle progression 2 protein isoform 1 [Homo
sapiens]
Length = 631
Score = 561 bits (1446), Expect = e-160
Identities = 317/467 (67%), Positives = 350/467 (74%), Gaps = 32/467 (6%)
Query: 58 VEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHL---LSEK 114
+ +E+ S + + + HL ++ T E DS+ V++++ HL L +
Sbjct: 194 LSQEQHSQELLAELLTHLERRWTEIE------------DSHTLVTVMMKVGHLSEPLMNR 241
Query: 115 PEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRW 174
EDK L + + L + +A+ ++ L Y L + K + V +V +
Sbjct: 242 LEDKCLELVEHFGPNELRKVLVMLAAQSRRSVPLLRAISYHL-VQKPFSLTKDVLLDVAY 300
Query: 175 RMRKLKYKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHL 234
KL + Q Q SQ L +LL+ L T E +H + + + L
Sbjct: 301 AYGKLSFH-------------QTQVSQRLATDLLS-LMPSLTSGEVAHCAKSFAL-LKWL 345
Query: 235 SEPLMNRLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGL 294
S PL +HVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGL
Sbjct: 346 SLPLFEAFA-QHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGL 404
Query: 295 EPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLE 354
EPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLE
Sbjct: 405 EPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLE 464
Query: 355 YPEYSGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDA 414
YPEYSGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDA
Sbjct: 465 YPEYSGPLLPASAVAPGPSALDRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDA 524
Query: 415 EVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVL 474
EVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVL
Sbjct: 525 EVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVL 584
Query: 475 ARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 521
ARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK
Sbjct: 585 ARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMRKAVAEELAK 631
Score = 488 bits (1257), Expect = e-138
Identities = 260/334 (77%), Positives = 272/334 (81%), Gaps = 43/334 (12%)
Query: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK
Sbjct: 1 MAAHLVKRCTCLLREAARQAPAMAPVGRLRLAWVAHKTLTSSATSPISHLPGSLMEPVEK 60
Query: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL
Sbjct: 61 ERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGL 120
Query: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK
Sbjct: 121 LIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLK 180
Query: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN
Sbjct: 181 YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGHLSEPLMN 240
Query: 241 RLEDK------------------------------------HVLNRAQDITLPHLCSVLL 264
RLEDK H++ + +T L V
Sbjct: 241 RLEDKCLELVEHFGPNELRKVLVMLAAQSRRSVPLLRAISYHLVQKPFSLTKDVLLDVAY 300
Query: 265 AFARLNFHPDQEDQFFSLVHEKLGSELPGLEPAL 298
A+ +L+FH Q V ++L ++L L P+L
Sbjct: 301 AYGKLSFHQTQ-------VSQRLATDLLSLMPSL 327
>gi|40068497 FAST kinase domains 3 [Homo sapiens]
Length = 662
Score = 77.4 bits (189), Expect = 3e-14
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 22/284 (7%)
Query: 234 LSEPLMNRLEDKHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPG 293
LS+P++N + + V + + + + +++ F +LN+ P F + L +
Sbjct: 384 LSKPILNAVAETFVC-QTEKFSPRQISALMEPFGKLNYLPPNASALFRKLENVLFTHFNY 442
Query: 294 LEPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLGGK-SQKDQNTFQKLLHINATAL 352
P + L+ + C L + A + +Q L GK S D + +L + ++
Sbjct: 443 FPPKSLLKLLHS-CSLNECHPVNFLAKIFKPLFLQRLQGKESHLDTLSRAQLTQLFLASV 501
Query: 353 LEYPEYSGP-LLPASAVAPGPSALDRKVTPLQKELQETLK----GLLGSADKGSLEVATQ 407
LE P Y GP LLP V + TP+ +L +K LLG+ + +V T
Sbjct: 502 LECPFYKGPKLLPKYQVKSFLTPCCSLETPVDSQLYRYVKIGLTNLLGARLYFAPKVLTP 561
Query: 408 YGWVLDAEVLLDSDGEFLPVRDFVAPHLAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKD 467
Y + +D E+ LD +G LP S + KR+A F S SK
Sbjct: 562 YCYTIDVEIKLDEEGFVLP--------------STANEDIHKRIALCIDGPKRFCSNSKH 607
Query: 468 LLGRFVLARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKM 511
LLG+ + +RH+ G+ +V +P++E LKS + YL+ K+
Sbjct: 608 LLGKEAIKQRHLQLLGYQVVQIPYHEIGMLKSRRELVEYLQRKL 651
>gi|5729822 Fas-activated serine/threonine kinase isoform 1 [Homo
sapiens]
Length = 549
Score = 76.3 bits (186), Expect = 7e-14
Identities = 113/462 (24%), Positives = 189/462 (40%), Gaps = 29/462 (6%)
Query: 72 VDHLIKKATRPEELLELLGGSHD-LDSNQAAMVLIRLSHLLSEKPEDKGLLIQDAHFHQL 130
+ L+++A P ELL LG + + ++ ++ L RL LL +P ++ L
Sbjct: 85 LQRLLEQAKSPGELLRWLGQNPSKVRAHHYSVALRRLGQLLGSRPRPPP--VEQVTLQDL 142
Query: 131 LCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLKYKHLAFLAES 190
L+ S T+ L LG P + ++EQE R R+ L L
Sbjct: 143 SQLIIRNCPSFDIHTIHVCLHLAVLLGFPSDGPLVCALEQERRLRLPPKPPPPLQPLLRG 202
Query: 191 C----ATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKVGH--LSEPLMNRLED 244
A LS + + L++ L E H +V + + L EP +
Sbjct: 203 GQGLEAALSCPRFLRYPRQHLISSLAEARPEELTPHVMVLLAQHLARHRLREPQLLEAIA 262
Query: 245 KHVLNRAQDITLPHLCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQVDLVW 304
++ + ++ + ++L F RLN+ P E QF + L E G+ P V+++
Sbjct: 263 HFLVVQETQLSSKVVQKLVLPFGRLNYLP-LEQQFMPCLERILAREA-GVAPLATVNILM 320
Query: 305 ALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATAL-LEYPEYSGPLL 363
+LC L+ L V P F I ++ G ++ L + TA+ LE P Y GP L
Sbjct: 321 SLCQLRCLPFRALHFVFSPGF-INYISGTPHA--LIVRRYLSLLDTAVELELPGYRGPRL 377
Query: 364 PASA---VAPGPSALDRKVTPLQKE--LQETLKGLLGSADKGSLEVATQYGWVLDAEVLL 418
P + P P DR + + E L+ LLG +K ++ G+ D +
Sbjct: 378 PRRQQVPIFPQPLITDRARCKYSHKDIVAEGLRQLLGE-EKYRQDLTVPPGYCTDFLLCA 436
Query: 419 DSDGEFLPVR--DFVAPH------LAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLG 470
S G LPVR D P+ Q S + ++R+ + E +F + LLG
Sbjct: 437 SSSGAVLPVRTQDPFLPYPPRSCPQGQAASSATTRDPAQRVVLVLRERWHFCRDGRVLLG 496
Query: 471 RFVLARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYLKDKMR 512
L RH+ G+ ++ +PF E + Q +YL+ K++
Sbjct: 497 SRALRERHLGLMGYQLLPLPFEELESQRGLPQLKSYLRQKLQ 538
>gi|188497683 FAST kinase domains 1 [Homo sapiens]
Length = 847
Score = 68.9 bits (167), Expect = 1e-11
Identities = 81/379 (21%), Positives = 168/379 (44%), Gaps = 46/379 (12%)
Query: 162 SKELQSVEQEVRWRMRKLKYKH-LAFLAESCATLSQEQHSQELLAELLTHLERRWTEIED 220
+K+L+ +++ + ++L++ + L L + +L + LL E++ L+ +I
Sbjct: 474 AKQLKLLQKLDHYGRQRLQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINY 533
Query: 221 SHT--LVTVMMKVGHLSEPLMNRLEDKHV--LNRAQDITLPHLCSVLLAFARLNFHPDQE 276
+ + + + +LS L++R+ V + + T+P +++ F+ LN+ P Q
Sbjct: 534 INVGEIASFISSTDYLSTLLLDRIASVAVQQIEKIHPFTIP---AIIRPFSVLNYDPPQR 590
Query: 277 DQFFSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVLHPEFHIQFLG----- 331
D+F + L S L L+P + V L ++L L+ E L+A+ F+I+FL
Sbjct: 591 DEFLGTCVQHLNSYLGILDPFILVFLGFSLATLEYFPEDLLKAI----FNIKFLARLDSQ 646
Query: 332 ----GKSQKDQNTFQKLLHINATALLEYPEYSGPLLP---ASAVAPGPSALDRKVTPLQK 384
S+ + F L+ +N + LE PE+ P G +D Q+
Sbjct: 647 LEILSPSRSARVQFH-LMELNRSVCLECPEFQIPWFHDRFCQQYNKGIGGMD----GTQQ 701
Query: 385 ELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDSDGEFLPVRDFVAPHLAQPTGSQSP 444
++ + L +LG + V T Y +D E +LD + LP + + ++A + P
Sbjct: 702 QIFKMLAEVLGGINCVKASVLTPYYHKVDFECILDKRKKPLP---YGSHNIALGQLPEMP 758
Query: 445 ------------PPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIVAAGFLIVDVPFY 492
PPG++R+A + + G+ + +RH+ G+ ++ + +
Sbjct: 759 WESNIEIVGSRLPPGAERIALEFLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQF 818
Query: 493 EW--LELKSEWQKGAYLKD 509
EW + L ++ + YL++
Sbjct: 819 EWNSMALSTKDARMDYLRE 837
>gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Homo
sapiens]
Length = 408
Score = 64.3 bits (155), Expect = 3e-10
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 262 VLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVL 321
++L F RLN+ P E QF + L E G+ P V+++ +LC L+ L V
Sbjct: 139 LVLPFGRLNYLP-LEQQFMPCLERILAREA-GVAPLATVNILMSLCQLRCLPFRALHFVF 196
Query: 322 HPEFHIQFLGGKSQKDQNTFQKLLHINATAL-LEYPEYSGPLLPASA---VAPGPSALDR 377
P F I ++ G ++ L + TA+ LE P Y GP LP + P P DR
Sbjct: 197 SPGF-INYISGTPHA--LIVRRYLSLLDTAVELELPGYRGPRLPRRQQVPIFPQPLITDR 253
Query: 378 KVTPLQKE--LQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDSDGEFLPVR--DFVAP 433
+ + E L+ LLG +K ++ G+ D + S G LPVR D P
Sbjct: 254 ARCKYSHKDIVAEGLRQLLGE-EKYRQDLTVPPGYCTDFLLCASSSGAVLPVRTQDPFLP 312
Query: 434 H------LAQPTGSQSPPPGSKRLAFLRWEFPNFNSRSKDLLGRFVLARRHIVAAGFLIV 487
+ Q S + ++R+ + E +F + LLG L RH+ G+ ++
Sbjct: 313 YPPRSCPQGQAASSATTRDPAQRVVLVLRERWHFCRDGRVLLGSRALRERHLGLMGYQLL 372
Query: 488 DVPFYEWLELKSEWQKGAYLKDKMR 512
+PF E + Q +YL+ K++
Sbjct: 373 PLPFEELESQRGLPQLKSYLRQKLQ 397
>gi|11141903 FAST kinase domains 5 [Homo sapiens]
Length = 764
Score = 37.0 bits (84), Expect = 0.044
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 465 SKDLLGRFVLARRHIVAAGFLIVDVPFYEWLEL--KSEWQKGAYLKDKM 511
S+DLLG + RR + G+ +V++ ++EWL L ++ +K A+L +K+
Sbjct: 711 SRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHEKV 759
Score = 29.3 bits (64), Expect = 9.1
Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 11/183 (6%)
Query: 259 LCSVLLAFARLNFHPDQEDQFFSLVHEKLGSELPGLE--PALQVDLVWALCVLQQAREAE 316
+ +L +F LN+ P ++F+S + ++ ++P P + L L+
Sbjct: 430 VAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVEL 489
Query: 317 LQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGPLLPASAVAPGPSAL- 375
+ L P F ++ +++ D ++L ++ T +E P+Y G L G L
Sbjct: 490 IDFALSPGF-VRLAQERTKFD--LLKELYTLDGTVGIECPDYRGNRLSTHLQQEGSELLW 546
Query: 376 -----DRKVTPLQKELQETLKGLLGSADKGSLEVATQYGWVLDAEVLLDSDGEFLPVRDF 430
D P E L+ +LG + + D EV LD + + LP
Sbjct: 547 YLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPLPFNRE 606
Query: 431 VAP 433
P
Sbjct: 607 ATP 609
>gi|224593756 hypothetical protein LOC164127 [Homo sapiens]
Length = 623
Score = 36.6 bits (83), Expect = 0.057
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 17/199 (8%)
Query: 56 EPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSEKP 115
E +EK RA + KQ +++ E++L L H L + + R HL + +
Sbjct: 359 EKLEKARAQAEH-RKQCQ--VRRLREQEKMLRNLREQHSLQLQRRLVEACRKRHLHAVEG 415
Query: 116 EDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRW- 174
+ K +QD + L L+N Q V +K L L + ++ + Q + Q +R
Sbjct: 416 QKK---VQDTN---LSSLINYQARKVLMDCQAKAEELLRQLSLEQSFQRSQEIHQGLRKE 469
Query: 175 RMRKLK---YKHLAFLAESCATLSQEQHSQELLAELLTHLERRWTEIEDSHTLVTVMMKV 231
R R+L+ K L ++ + + +++ +L L SH T KV
Sbjct: 470 RQRELREKAQKEEEQLQQARWRAGESEEQRKMRKRILVELADEKIRQARSHVHKTTRDKV 529
Query: 232 GHLSEPLMNRLEDK--HVL 248
HL E +N L +K H+L
Sbjct: 530 QHLRE--LNHLREKNHHIL 546
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 34.7 bits (78), Expect = 0.22
Identities = 81/374 (21%), Positives = 138/374 (36%), Gaps = 75/374 (20%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSE 113
L E +E ERAS EKQ L ++ E LE GG+ L++
Sbjct: 1121 LGEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVE------------LNK 1168
Query: 114 KPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKE---LQSVEQ 170
K E A F +L L A++ H + L +A + + ++ LQ V+Q
Sbjct: 1169 KRE--------AEFQKLRRDLEE--ATLQHEAMVAALRKKHADSMAELGEQIDNLQRVKQ 1218
Query: 171 EVRWRMRKLKY-------------KHLAFLAESCATL--------SQEQHSQELLAELLT 209
++ +LK K L + C +L ++E+ Q L+ +L
Sbjct: 1219 KLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQVSELKTKEEEQQRLINDLTA 1278
Query: 210 HLERRWTE-------IEDSHTLVTVMMKVGHLS----EPLMNRLEDKHVLNRAQDITLP- 257
R TE +++ LV+ + + S E L ++LE++ A L
Sbjct: 1279 QRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIEELKHQLEEETKAKNALAHALQS 1338
Query: 258 --HLCSVLLAFARLNFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQARE 314
H C +L R + +QE + K SE+ + D + L++A++
Sbjct: 1339 SRHDCDLL----REQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKK 1394
Query: 315 AELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGPLLPASAVAPGPSA 374
Q + E H++ + K + T Q+L + E +L +A
Sbjct: 1395 KLAQRLQEAEEHVEAVNAKCASLEKTKQRLQN----------EVEDLMLDVERSNAACAA 1444
Query: 375 LDRKVTPLQKELQE 388
LD+K K L E
Sbjct: 1445 LDKKQRNFDKVLSE 1458
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.28
Identities = 77/377 (20%), Positives = 138/377 (36%), Gaps = 81/377 (21%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGG--SHDLDSNQAAMVLIRLSHLL 111
L E +E ERAS EKQ L ++ E LE GG S ++ N+
Sbjct: 1124 LEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKK----------- 1172
Query: 112 SEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKE---LQSV 168
++A F ++ L A++ H + L +A + + ++ LQ V
Sbjct: 1173 -----------REAEFQKMRRDLEE--ATLQHEATAATLRKKHADSVAELGEQIDNLQRV 1219
Query: 169 EQEVRWRMRKLKY-------------KHLAFLAESCATL--------SQEQHSQELLAEL 207
+Q++ ++K K L + C TL S+E+ Q L+ +L
Sbjct: 1220 KQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLINDL 1279
Query: 208 LTHLERRWTE-------IEDSHTLVTVMMK--------VGHLSEPLMNRLEDKHVLNRAQ 252
R TE +++ LV+ + + + L L ++ K+ L A
Sbjct: 1280 TAQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAFTQQIEELKRQLEEEIKAKNALAHAL 1339
Query: 253 DITLPHLCSVLLAFARLNFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQ 311
+ H C +L R + +QE + K +E+ + D + L++
Sbjct: 1340 QSSR-HDCDLL----REQYEEEQESKAELQRALSKANTEVAQWRTKYETDAIQRTEELEE 1394
Query: 312 AREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGPLLPASAVAPG 371
A++ Q + E H++ + K + T Q+L + E +L
Sbjct: 1395 AKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQN----------EVEDLMLDVERTNAA 1444
Query: 372 PSALDRKVTPLQKELQE 388
+ALD+K K L E
Sbjct: 1445 CAALDKKQRNFDKILAE 1461
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 34.3 bits (77), Expect = 0.28
Identities = 77/377 (20%), Positives = 138/377 (36%), Gaps = 81/377 (21%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGG--SHDLDSNQAAMVLIRLSHLL 111
L E +E ERAS EKQ L ++ E LE GG S ++ N+
Sbjct: 1124 LEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKK----------- 1172
Query: 112 SEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKE---LQSV 168
++A F ++ L A++ H + L +A + + ++ LQ V
Sbjct: 1173 -----------REAEFQKMRRDLEE--ATLQHEATAATLRKKHADSVAELGEQIDNLQRV 1219
Query: 169 EQEVRWRMRKLKY-------------KHLAFLAESCATL--------SQEQHSQELLAEL 207
+Q++ ++K K L + C TL S+E+ Q L+ +L
Sbjct: 1220 KQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLINDL 1279
Query: 208 LTHLERRWTE-------IEDSHTLVTVMMK--------VGHLSEPLMNRLEDKHVLNRAQ 252
R TE +++ LV+ + + + L L ++ K+ L A
Sbjct: 1280 TAQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAFTQQIEELKRQLEEEIKAKNALAHAL 1339
Query: 253 DITLPHLCSVLLAFARLNFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQ 311
+ H C +L R + +QE + K +E+ + D + L++
Sbjct: 1340 QSSR-HDCDLL----REQYEEEQESKAELQRALSKANTEVAQWRTKYETDAIQRTEELEE 1394
Query: 312 AREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGPLLPASAVAPG 371
A++ Q + E H++ + K + T Q+L + E +L
Sbjct: 1395 AKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQN----------EVEDLMLDVERTNAA 1444
Query: 372 PSALDRKVTPLQKELQE 388
+ALD+K K L E
Sbjct: 1445 CAALDKKQRNFDKILAE 1461
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 32.7 bits (73), Expect = 0.83
Identities = 76/377 (20%), Positives = 137/377 (36%), Gaps = 81/377 (21%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGG--SHDLDSNQAAMVLIRLSHLL 111
L E +E ERAS EKQ L ++ E LE GG S ++ N+
Sbjct: 1122 LEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKK----------- 1170
Query: 112 SEKPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKE---LQSV 168
++A F ++ L A++ H + L +A + + ++ LQ V
Sbjct: 1171 -----------REAEFQKMRRDLEE--ATLQHEATAATLRKKHADSVAELGEQIDNLQRV 1217
Query: 169 EQEVRWRMRKLKY-------------KHLAFLAESCATL--------SQEQHSQELLAEL 207
+Q++ ++K K L + C L ++E+ Q L+ +L
Sbjct: 1218 KQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSEIKTKEEEQQRLINDL 1277
Query: 208 LTHLERRWTE-------IEDSHTLVTVMMK--------VGHLSEPLMNRLEDKHVLNRAQ 252
R TE +++ TLV+ + + + L L ++ K L A
Sbjct: 1278 TAQRARLQTESGEYSRQLDEKDTLVSQLSRGKQAFTQQIEELKRQLEEEIKAKSALAHAL 1337
Query: 253 DITLPHLCSVLLAFARLNFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQ 311
+ H C +L R + +QE + K SE+ + D + L++
Sbjct: 1338 QSSR-HDCDLL----REQYEEEQEAKAELQRAMSKANSEVAQWRTKYETDAIQRTEELEE 1392
Query: 312 AREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGPLLPASAVAPG 371
A++ Q + E H++ + K + T Q+L + E ++
Sbjct: 1393 AKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQN----------EVEDLMIDVERTNAA 1442
Query: 372 PSALDRKVTPLQKELQE 388
+ALD+K K L E
Sbjct: 1443 CAALDKKQRNFDKILAE 1459
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 32.7 bits (73), Expect = 0.83
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 47/321 (14%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSE 113
L E +E ERAS EKQ L ++ E LE GG+ S Q M R +
Sbjct: 1122 LEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGA---TSAQIEMNKKREAEFQKM 1178
Query: 114 KPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVR 173
+ + + +Q H L SV L + + SL + K KE ++ E+
Sbjct: 1179 RRDLEESTLQ--HEATAAALRKKHADSV--AELGEQIDSLQRVK-QKLEKEKSELKMEIN 1233
Query: 174 WRMRKLK--YKHLAFLAESCATL--------SQEQHSQELLAELLTHLERRWTEI-EDSH 222
++ K A + C TL ++E+ Q L+ EL R TE E S
Sbjct: 1234 DLASNMETVSKAKANFEKMCRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSR 1293
Query: 223 TLVTVMMKVGHLS----------EPLMNRLEDK--------HVLNRAQDITLPHLCSVLL 264
L V LS E L +LE++ H L A+ H C +L
Sbjct: 1294 QLDEKDAMVSQLSRGKQAFTQQIEELKRQLEEETKAKSTLAHALQSAR-----HDCDLL- 1347
Query: 265 AFARLNFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVLHP 323
R + +QE + K SE+ + D + L++A++ Q +
Sbjct: 1348 ---REQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDA 1404
Query: 324 EFHIQFLGGKSQKDQNTFQKL 344
E H++ + K + T Q+L
Sbjct: 1405 EEHVEAVNSKCASLEKTKQRL 1425
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.3 bits (72), Expect = 1.1
Identities = 69/316 (21%), Positives = 122/316 (38%), Gaps = 37/316 (11%)
Query: 54 LMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLIRLSHLLSE 113
L E +E ERA+ EKQ ++ E LE GG + S Q + R + L
Sbjct: 1119 LEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGG---VTSTQIELNKKREAEFLKL 1175
Query: 114 KPEDKGLLIQDAHFHQLLCLLNSQIASVWHGTLSKLLGSLYALGIPKASKELQSVEQEVR 173
+ + + +Q H + L SV L + + +L + K KE + E+
Sbjct: 1176 RRDLEEATLQ--HEAMVAALRKKHADSV--AELGEQIDNLQRVK-QKLEKEKSEFKLEID 1230
Query: 174 WRMRKLK--YKHLAFLAESCATLSQE--------QHSQELLAELLTHLERRWTE------ 217
++ K A L + C TL + + Q L+EL T R TE
Sbjct: 1231 DLSSSMESVSKSKANLEKICRTLEDQLSEARGKNEEIQRSLSELTTQKSRLQTEAGELSR 1290
Query: 218 -IEDSHTLVTVMMK----VGHLSEPLMNRLEDKHVLNRAQDITLP---HLCSVLLAFARL 269
+E+ ++V+ + + +E L +LE+++ A L H C +L R
Sbjct: 1291 QLEEKESIVSQLSRSKQAFTQQTEELKRQLEEENKAKNALAHALQSSRHDCDLL----RE 1346
Query: 270 NFHPDQEDQF-FSLVHEKLGSELPGLEPALQVDLVWALCVLQQAREAELQAVLHPEFHIQ 328
+ +QE + K SE+ + D + L++A++ Q + E ++
Sbjct: 1347 QYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDSEEQVE 1406
Query: 329 FLGGKSQKDQNTFQKL 344
+ K + T Q+L
Sbjct: 1407 AVNAKCASLEKTKQRL 1422
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 32.0 bits (71), Expect = 1.4
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 187 LAESCATLSQEQHSQELLAELLTH----LERRWTEIED--SHTLVTVMMKVGHLSEPLMN 240
L++ +L EQ Q LL L LER TE + S + + ++ HL + L N
Sbjct: 798 LSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKLEN 857
Query: 241 RLEDKHVLNRAQDITL 256
+E +H L R D+ L
Sbjct: 858 EVEQRHTLTRNLDVQL 873
>gi|239743173 PREDICTED: similar to solute carrier family 29
(nucleoside transporters), member 4 [Homo sapiens]
Length = 414
Score = 31.2 bits (69), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 442 QSPPPGSKRLAFLRWEFPNFNSRSKD 467
Q PPPG+ R+A LRW P + + D
Sbjct: 5 QQPPPGAGRVADLRWRGPQYQIQHSD 30
>gi|239508837 PREDICTED: similar to solute carrier family 29
(nucleoside transporters), member 4 [Homo sapiens]
Length = 414
Score = 31.2 bits (69), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 442 QSPPPGSKRLAFLRWEFPNFNSRSKD 467
Q PPPG+ R+A LRW P + + D
Sbjct: 5 QQPPPGAGRVADLRWRGPQYQIQHSD 30
>gi|55953117 ribosomal protein S6 kinase, 70kDa, polypeptide 2 [Homo
sapiens]
Length = 482
Score = 30.8 bits (68), Expect = 3.1
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 150 LGSLYALGIPKASKELQSVEQEVRWR-----MRKLKYKHLAFLAESCATLSQEQHSQELL 204
LG +YA+ + + +K +++ + R + +K+ + LA + T + E L
Sbjct: 92 LGKIYAMKVLRKAKIVRNAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECL 151
Query: 205 A--ELLTHLERRWTEIEDS--HTLVTVMMKVGHL 234
+ EL THLER +ED+ L + + +GHL
Sbjct: 152 SGGELFTHLEREGIFLEDTACFYLAEITLALGHL 185
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 38 TLTSSATSPISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDS 97
TL+ S ++ + S+++ KER S+P E + ++ +RP + + + D DS
Sbjct: 2456 TLSVSGSNLLQSFKESMVKDKRKERKSSPSKENESSDSEEEVSRPRKSRKRVDSDSDSDS 2515
Query: 98 NQAAMVLIRLSHLLSEKPEDKGLLIQDAHFHQLLCLL 134
++ ++ PE+ LI+ A+ Q + LL
Sbjct: 2516 ED------DINSVMKCLPENSAPLIEFANVSQGILLL 2546
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 38 TLTSSATSPISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDS 97
TL+ S ++ + S+++ KER S+P E + ++ +RP + + + D DS
Sbjct: 2456 TLSVSGSNLLQSFKESMVKDKRKERKSSPSKENESSDSEEEVSRPRKSRKRVDSDSDSDS 2515
Query: 98 NQAAMVLIRLSHLLSEKPEDKGLLIQDAHFHQLLCLL 134
++ ++ PE+ LI+ A+ Q + LL
Sbjct: 2516 ED------DINSVMKCLPENSAPLIEFANVSQGILLL 2546
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 30.8 bits (68), Expect = 3.1
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 84 ELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGLLIQDAHFHQLLCLLNSQIASVWH 143
+ LE++ G+ D+ RL+ K + + QDA + L+ + V
Sbjct: 147 QTLEMVIGASDVLEETWEKTFTRLALENMTKATELEDIYQDAASNMLVAICRHSWRVVAQ 206
Query: 144 GTLSKLLGS-------LYALGIPKASKELQSVEQEVRWRMRKLKYKHLAFLAESCATLSQ 196
++LL LY +G+ +S+EL S E + W + ++ +S LS
Sbjct: 207 HLETELLTGVFPHRSLLYVMGVLSSSEELFSQEDKACWEEQLIQ-----MAIKSVPFLST 261
Query: 197 EQHSQELLAELLTHLERRWTEIEDS 221
+ S+ELL L T WT+ E S
Sbjct: 262 DVWSKELLWTLTT---PSWTQQEQS 283
>gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo
sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 342 QKLLHINATALLEYPEYSGPLLPASAVAPGPSALDRKVTPLQ-KELQETLKG 392
Q L + A +P S L+PA+ PG SALDR+ P +E+ ET+ G
Sbjct: 222 QTLYSMATQAAYVFPAESW-LVPATLPGPGESALDREAHPFPGQEITETVSG 272
>gi|27881506 ATP-binding cassette, sub-family F, member 2 isoform a
[Homo sapiens]
Length = 623
Score = 30.4 bits (67), Expect = 4.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 46 PISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLI 105
P P + V+ ERA +EK+ + L + E+L+EL +LD+++A M
Sbjct: 153 PSDKTPLHCVMEVDTERAM---LEKEAERLAHEDAECEKLMELYERLEELDADKAEMRAS 209
Query: 106 RLSHLLSEKP 115
R+ H L P
Sbjct: 210 RILHGLGFTP 219
>gi|10947137 ATP-binding cassette, sub-family F, member 2 isoform b
[Homo sapiens]
Length = 634
Score = 30.4 bits (67), Expect = 4.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 46 PISHLPGSLMEPVEKERASTPYIEKQVDHLIKKATRPEELLELLGGSHDLDSNQAAMVLI 105
P P + V+ ERA +EK+ + L + E+L+EL +LD+++A M
Sbjct: 153 PSDKTPLHCVMEVDTERAM---LEKEAERLAHEDAECEKLMELYERLEELDADKAEMRAS 209
Query: 106 RLSHLLSEKP 115
R+ H L P
Sbjct: 210 RILHGLGFTP 219
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 302 LVWALCVLQQAREAELQAVLHPEFHIQFLGGKSQKDQNTFQKLLHINATALLEYPEYSGP 361
L W Q+ARE + + L E + QK N+ +L H T +E P P
Sbjct: 13 LEWQAQQQQRAREEQERLRLEQERE------QEQKKANSLARLAH---TLPVEEPRMEAP 63
Query: 362 LLPASAVAPGPSALDRKVTP 381
LP S AP P+ TP
Sbjct: 64 PLPLSPPAPPPAPPPPLATP 83
>gi|52353320 FSHD region gene 2 [Homo sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 342 QKLLHINATALLEYPEYSGPLLPASAVAPGPSALDRKVTPLQ-KELQETLKG 392
Q L + A +P S L+PA+ PG SALDR+ P +E+ ET+ G
Sbjct: 222 QTLYSMATQAAYVFPAESW-LVPATLPGPGESALDREAHPFPGQEITETVSG 272
>gi|145309304 cadherin EGF LAG seven-pass G-type receptor 3 [Homo
sapiens]
Length = 3312
Score = 30.4 bits (67), Expect = 4.1
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 83 EELLELLGGSHDLDSNQAAMVLIRLSHLLSEKPEDKGLLI---QDAHFHQLLCLLNSQIA 139
+ L E+ G + S + L+HLL+ + +G + QDAHF++ L S +
Sbjct: 2210 QRLREVTGHTDHYFSQDVRVTARLLAHLLAFESHQQGFGLTATQDAHFNENLLWAGSALL 2269
Query: 140 SVWHGTLSKLLGSLYALGIPKASKELQSVEQEVRWRMRKLKYKHL 184
+ G L LG G P ++ ++ +E+ R ++ +L
Sbjct: 2270 APETGDLWAALGQRAPGGSPGSAGLVRHLEEYAATLARNMELTYL 2314
>gi|50233787 nuclear protein in testis [Homo sapiens]
Length = 1132
Score = 30.4 bits (67), Expect = 4.1
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 30/162 (18%)
Query: 310 QQAREAELQAVLHPEFHIQFLGGKSQKDQ------------NTFQKLLHINATALLEY-- 355
Q+ ++++AV+HP+F L + Q+D T +L+ AL E
Sbjct: 420 QKVFVSKVEAVIHPQFLADLLSPEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEED 479
Query: 356 ----PEYSGPLLPASAVAPGPSALD-------RKVTPLQKELQETLKGLLGSADKGSLEV 404
P +SG L +S P S D R LQ G + S+ K + EV
Sbjct: 480 AEAPPSFSGAQLDSS---PSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREV 536
Query: 405 ATQYGWVLDAEVLLDSDGEFLPVRDF--VAPHLAQPTGSQSP 444
LD+ + DG LP + P LA P G+ P
Sbjct: 537 HGGQEQALDSPRGMHRDGNTLPSPSSWDLQPELAAPQGTPGP 578
>gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]
Length = 278
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 342 QKLLHINATALLEYPEYSGPLLPASAVAPGPSALDRKVTPLQ-KELQETLKG 392
Q L + A +P S L+PA+ PG SALDR+ P +E+ ET+ G
Sbjct: 222 QTLYSMATQAAYVFPAESW-LVPATLPGPGESALDREAHPFPGQEITETVSG 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,834,720
Number of Sequences: 37866
Number of extensions: 949652
Number of successful extensions: 2940
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2907
Number of HSP's gapped (non-prelim): 51
length of query: 521
length of database: 18,247,518
effective HSP length: 107
effective length of query: 414
effective length of database: 14,195,856
effective search space: 5877084384
effective search space used: 5877084384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.