Guide to the Human Genome
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Name: NOL7 Sequence: fasta or formatted (257aa) NCBI GI: 13569843
Description:

nucleolar protein 7, 27kDa

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         25           3
 C cysteine            0.4          1           1
 D aspartate           5.1         13           2
 E glutamate          11.3         29           4
 F phenylalanine       2.7          7           1
 G glycine             3.9         10           1
 H histidine           0.8          2           1
 I isoleucine          1.9          5           1
 K lysine             12.5         32           2
 L leucine             8.9         23           3
 M methionine          1.6          4           1
 N asparagine          4.7         12           2
 P proline             3.5          9           1
 Q glutamine           6.6         17           2
 R arginine            8.9         23           2
 S serine              5.8         15           2
 T threonine           4.3         11           2
 V valine              5.8         15           1
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 7, 27kDa 
SURF6                 0.051   surfeit 6 
TCHH                  0.046   trichohyalin 
ASPH                  0.042   aspartate beta-hydroxylase isoform d 
ASPH                  0.042   aspartate beta-hydroxylase isoform e 
INCENP                0.042   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.042   inner centromere protein antigens 135/155kDa isofor...
KIF3B                 0.040   kinesin family member 3B 
CALD1                 0.040   caldesmon 1 isoform 1 
TNNT2                 0.038   troponin T type 2, cardiac isoform 4 
MAP7D1                0.038   MAP7 domain containing 1 
RPGR                  0.036   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
NKAP                  0.036   NFKB activating protein 
EIF5B                 0.036   eukaryotic translation initiation factor 5B 
BAT2D1                0.036   HBxAg transactivated protein 2 
RRBP1                 0.034   ribosome binding protein 1 
RRBP1                 0.034   ribosome binding protein 1 
ACRC                  0.034   ACRC protein 
DDX23                 0.034   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
PPP1R9A               0.034   protein phosphatase 1, regulatory (inhibitor) subuni...
MYH9                  0.032   myosin, heavy polypeptide 9, non-muscle 
TNNT2                 0.032   troponin T type 2, cardiac isoform 1 
NEK2                  0.032   NIMA-related kinase 2 
RTF1                  0.032   Paf1/RNA polymerase II complex component 
MAP7                  0.032   microtubule-associated protein 7 
LMOD3                 0.032   leiomodin 3 (fetal) 
CCDC59                0.032   coiled-coil domain containing 59 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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