Search of human proteins with 61676108

Search of human proteins with 61676108

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61676108 cytoplasmic tRNA 2-thiolation protein 2 isoform 2
[Homo sapiens]
         (485 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61676108 cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [H...   993   0.0  
gi|61676106 cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [H...   969   0.0  
gi|239751150 PREDICTED: hypothetical protein XP_002347731 [Homo ...   504   e-143
gi|222537719 ATP binding domain 3 [Homo sapiens]                       37   0.040
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ...    36   0.069
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]          36   0.090
gi|206597502 NESH protein isoform 2 [Homo sapiens]                     36   0.090
gi|7705981 NESH protein isoform 1 [Homo sapiens]                       36   0.090
gi|148613882 homeobox A4 [Homo sapiens]                                34   0.26 
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase...    34   0.26 
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    34   0.34 
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    33   0.58 
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    33   0.58 
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    33   0.58 
gi|84490388 R-spondin1 [Homo sapiens]                                  33   0.76 
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]            33   0.76 
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s...    33   0.76 
gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo s...    33   0.76 
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s...    33   0.76 
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap...    32   0.99 
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap...    32   0.99 
gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]              32   0.99 
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ...    32   0.99 
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s...    32   0.99 
gi|38788260 bromodomain PHD finger transcription factor isoform ...    32   0.99 
gi|38788274 bromodomain PHD finger transcription factor isoform ...    32   0.99 
gi|61966741 TMF regulated nuclear protein [Homo sapiens]               32   0.99 
gi|26638655 potassium voltage-gated channel KQT-like protein 4 i...    32   1.3  
gi|26638653 potassium voltage-gated channel KQT-like protein 4 i...    32   1.3  
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi...    32   1.3  

>gi|61676108 cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Homo
           sapiens]
          Length = 485

 Score =  993 bits (2568), Expect = 0.0
 Identities = 485/485 (100%), Positives = 485/485 (100%)

Query: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
           MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60

Query: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
           AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120

Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
           QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180

Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
           FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240

Query: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
           LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD
Sbjct: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300

Query: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
           VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST
Sbjct: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360

Query: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
           VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP
Sbjct: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420

Query: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLGLGLAGD 480
           IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLGLGLAGD
Sbjct: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLGLGLAGD 480

Query: 481 PGLSD 485
           PGLSD
Sbjct: 481 PGLSD 485


>gi|61676106 cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Homo
           sapiens]
          Length = 515

 Score =  969 bits (2505), Expect = 0.0
 Identities = 473/473 (100%), Positives = 473/473 (100%)

Query: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
           MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60

Query: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
           AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120

Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
           QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180

Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
           FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240

Query: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
           LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD
Sbjct: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300

Query: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
           VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST
Sbjct: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360

Query: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
           VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP
Sbjct: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420

Query: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL 473
           IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL
Sbjct: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL 473


>gi|239751150 PREDICTED: hypothetical protein XP_002347731 [Homo
           sapiens]
          Length = 248

 Score =  504 bits (1298), Expect = e-143
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
           MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1   MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60

Query: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
           AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61  AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120

Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
           QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180

Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
           FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240

Query: 241 LLQTLR 246
           LLQTLR
Sbjct: 241 LLQTLR 246


>gi|222537719 ATP binding domain 3 [Homo sapiens]
          Length = 348

 Score = 37.0 bits (84), Expect = 0.040
 Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 11/127 (8%)

Query: 28  CVKCKEAQPVVVIR-AGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSS 86
           C  C  A+  +    +G A C  CF A +  +    +   RL+ PG  V +  SGG  S+
Sbjct: 6   CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65

Query: 87  SMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHV 146
                VL  + +  A RL     ++ VDEG         R   LA V+        P  V
Sbjct: 66  -----VLAHVLRALAPRLGISLQLVAVDEGIG-----GYRDAALAAVRRQAARWELPLTV 115

Query: 147 VALEEVF 153
           VA E++F
Sbjct: 116 VAYEDLF 122



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 15/150 (10%)

Query: 245 LRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVV- 303
           LR   +   AR  G + ++TG +   +A  ++ N   G    LA   G      G  +  
Sbjct: 150 LRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGEGGALPR 209

Query: 304 VRPMRDHTLKEVAFYNRL-----FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFP 358
            RP++  + KEV  Y        FS   V+       APE    H      + RL+   P
Sbjct: 210 CRPLQFASQKEVVLYAHFRRLDYFSEECVY-------APEAFRGHA--RDLLKRLEAARP 260

Query: 359 STVSTVYRTSEKLVKGPRDGPAAGDSGPRC 388
           S V  +  ++E+L   P   P    +  RC
Sbjct: 261 SAVLDLVHSAERLALAPAARPPRPGACSRC 290


>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
           sapiens]
          Length = 306

 Score = 36.2 bits (82), Expect = 0.069
 Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 12/102 (11%)

Query: 358 PSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAA----DSATAFGAQTSSR 413
           P+  S  +RT ++  + P+  PA G    R      + D   A    + A A  A TSS 
Sbjct: 75  PAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSG 134

Query: 414 LSQMQSPIPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQ 455
                     TE R P  P C P  G  QR G G     D Q
Sbjct: 135 HR--------TEKRKPQQPQCRPAAGTGQRRGSGCSPSADQQ 168


>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
          Length = 331

 Score = 35.8 bits (81), Expect = 0.090
 Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 25/115 (21%)

Query: 374 GPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIPLTETRTPPGPC 433
           GP  GPA G    R        D+   D+ATA          + +  +P TE   PPGP 
Sbjct: 59  GPGGGPAGGGGAAR--------DLKGRDAATA----------EARHRVPTTELCRPPGPA 100

Query: 434 CSPGVG--WAQRCGQGACRREDPQACIE-----EQLCYSCRVNMKDLGLGLAGDP 481
            +P      A+  G G   +  P A          L YS    +  LG G  G+P
Sbjct: 101 PAPAPASVTAELPGDGRMVQLSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEP 155


>gi|206597502 NESH protein isoform 2 [Homo sapiens]
          Length = 360

 Score = 35.8 bits (81), Expect = 0.090
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
           G GG P P +G+  PP PPL P +L  PP PA  E   +
Sbjct: 213 GVGGAPTP-KGQAAPPAPPL-PSSLDPPPPPAAVEVFQR 249


>gi|7705981 NESH protein isoform 1 [Homo sapiens]
          Length = 366

 Score = 35.8 bits (81), Expect = 0.090
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
           G GG P P +G+  PP PPL P +L  PP PA  E   +
Sbjct: 219 GVGGAPTP-KGQAAPPAPPL-PSSLDPPPPPAAVEVFQR 255


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 179 DSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAP 219
           + + Q     GA GGPG   G +QPP PP     L +P  P
Sbjct: 21  EEYAQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLP 61


>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2
           [Homo sapiens]
          Length = 883

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 11/94 (11%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE---LLQTL 245
           G   GPGP +    PP PP  P    RPP  A+TE +  +F         +E   +L++ 
Sbjct: 58  GGAAGPGPAR----PPVPPRPP----RPPETARTEPVVLVFVESAYSQLGQEIVAILESS 109

Query: 246 RTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL 279
           R      +A   G    +T ++  R  + +  NL
Sbjct: 110 RFRYSTELAPGRGDMPTLTDNTHGRYVLVIYENL 143


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAP 219
           G GG P P    + PP+PPL P     PP P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGP 252


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
           G G GPG  +  +   QPP  PQ   +P AP Q +   Q
Sbjct: 904 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 942


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
           G G GPG  +  +   QPP  PQ   +P AP Q +   Q
Sbjct: 911 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 949


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
           G G GPG  +  +   QPP  PQ   +P AP Q +   Q
Sbjct: 926 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 964


>gi|84490388 R-spondin1 [Homo sapiens]
          Length = 263

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 17/118 (14%)

Query: 27  KCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR----------AMLGKNRLIFPGEKVL 76
           KC+KCK             FC  C +  Y+HK R          A  G      P +  +
Sbjct: 93  KCIKCKIEHCEACFSHN--FCTKCKEGLYLHKGRCYPACPEGSSAANGTMECSSPAQCEM 150

Query: 77  LAWS-GGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEV 133
             WS  GP S     Q L G  + S +R R V     V + AAC  + E R  T+  V
Sbjct: 151 SEWSPWGPCSKK---QQLCGFRRGSEERTRRVLHAP-VGDHAACSDTKETRRCTVRRV 204


>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
          Length = 478

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 190 AGGGPGPTQGEEQPPQPPLDPQNLARPPAPA 220
           AGG PGP  G   PP PP  P + AR P  A
Sbjct: 6   AGGAPGPAPGPAGPP-PPAAPTSAARAPPQA 35


>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
           sapiens]
          Length = 375

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 58  KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
           KF     K ++++ G+K      G  S S+ +W+ L   ++D   + R + G+   DE A
Sbjct: 268 KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 321

Query: 118 ACGQSLEERSKTLAEVKPILQ 138
            C    EE  KTL + + + +
Sbjct: 322 GCSSVDEESYKTLKQQEEVFR 342


>gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo
           sapiens]
          Length = 202

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 58  KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
           KF     K ++++ G+K      G  S S+ +W+ L   ++D   + R + G+   DE A
Sbjct: 95  KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 148

Query: 118 ACGQSLEERSKTLAEVKPILQ 138
            C    EE  KTL + + + +
Sbjct: 149 GCSSVDEESYKTLKQQEEVFR 169


>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
           sapiens]
          Length = 434

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 58  KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
           KF     K ++++ G+K      G  S S+ +W+ L   ++D   + R + G+   DE A
Sbjct: 327 KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 380

Query: 118 ACGQSLEERSKTLAEVKPILQ 138
            C    EE  KTL + + + +
Sbjct: 381 GCSSVDEESYKTLKQQEEVFR 401


>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
           sapiens]
          Length = 1038

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 14/55 (25%)

Query: 187 VLGAGGGPGPTQG--------EEQPPQPPLD------PQNLARPPAPAQTEALSQ 227
           ++GAG   GP+QG        E+  P PPL+      PQ   +PP+ AQT  + Q
Sbjct: 654 LVGAGVPAGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQ 708


>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
           sapiens]
          Length = 1086

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 14/55 (25%)

Query: 187 VLGAGGGPGPTQG--------EEQPPQPPLD------PQNLARPPAPAQTEALSQ 227
           ++GAG   GP+QG        E+  P PPL+      PQ   +PP+ AQT  + Q
Sbjct: 732 LVGAGVPAGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQ 786


>gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]
          Length = 567

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 381 AGDSGP---RCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIP-LTETRTPPGPCC-- 434
           +GDSGP     L        D   SA      +SS +S   SP P L     PP P C  
Sbjct: 464 SGDSGPPDRSPLELHIGFPTDIPKSAPHSMTASSSSVS---SPSPGLPRRSAPPSPLCRS 520

Query: 435 -SPGVGWAQRCGQGACRREDP 454
            SPG G   R G G   R DP
Sbjct: 521 LSPGTGGGVRGGVGYLSRGDP 541


>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
            sapiens]
          Length = 1726

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 188  LGAGGGPGPTQGE--EQPPQPPLDPQNLARPPAPAQ 221
            LG  G  G  Q    +QPPQPP+ P N ++P   AQ
Sbjct: 1073 LGMFGNSGAAQARTMQQPPQPPVQPLNSSQPSLRAQ 1108


>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
            sapiens]
          Length = 1690

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 188  LGAGGGPGPTQGE--EQPPQPPLDPQNLARPPAPAQ 221
            LG  G  G  Q    +QPPQPP+ P N ++P   AQ
Sbjct: 1076 LGMFGNSGAAQARTMQQPPQPPVQPLNSSQPSLRAQ 1111


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 195  GPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTH 248
            GP + + Q  QP   PQ   +P +PAQ E  +Q     +T  +     +   TH
Sbjct: 2390 GPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTH 2443


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 195  GPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTH 248
            GP + + Q  QP   PQ   +P +PAQ E  +Q     +T  +     +   TH
Sbjct: 2264 GPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTH 2317


>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
          Length = 227

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 193 GPGPTQG--EEQPPQPPLDPQNLARPPAPAQT 222
           GPG  +G  E++ P PP DP   ++PP P  T
Sbjct: 10  GPGAQEGTAEQRSPPPPRDPMPSSQPPPPTPT 41


>gi|26638655 potassium voltage-gated channel KQT-like protein 4
           isoform b [Homo sapiens]
          Length = 641

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 378 GPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIPLTETRTPPGPCCSPG 437
           GP  GD+ PR  L   AL    ++   A G  +  RL  + SP+P      P  P   PG
Sbjct: 12  GPPPGDA-PRAELV--ALTAVQSEQGEAGGGGSPRRLGLLGSPLP------PGAPLPGPG 62

Query: 438 VGWAQRCGQ 446
            G    CGQ
Sbjct: 63  SGSGSACGQ 71


>gi|26638653 potassium voltage-gated channel KQT-like protein 4
           isoform a [Homo sapiens]
          Length = 695

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 378 GPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIPLTETRTPPGPCCSPG 437
           GP  GD+ PR  L   AL    ++   A G  +  RL  + SP+P      P  P   PG
Sbjct: 12  GPPPGDA-PRAELV--ALTAVQSEQGEAGGGGSPRRLGLLGSPLP------PGAPLPGPG 62

Query: 438 VGWAQRCGQ 446
            G    CGQ
Sbjct: 63  SGSGSACGQ 71


>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
           sapiens]
          Length = 410

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 16/63 (25%)

Query: 188 LGAGG-----GPGPTQGEEQ---PPQPPLDPQNL--------ARPPAPAQTEALSQLFCS 231
           LGAGG     GP    G E    PP PPL P ++          PPA   + A S  FC 
Sbjct: 82  LGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCK 141

Query: 232 VRT 234
            +T
Sbjct: 142 EKT 144


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,029,219
Number of Sequences: 37866
Number of extensions: 1221236
Number of successful extensions: 9804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 9318
Number of HSP's gapped (non-prelim): 571
length of query: 485
length of database: 18,247,518
effective HSP length: 106
effective length of query: 379
effective length of database: 14,233,722
effective search space: 5394580638
effective search space used: 5394580638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.