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Search of human proteins with 61676106
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61676106 cytoplasmic tRNA 2-thiolation protein 2 isoform 1
[Homo sapiens]
(515 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61676106 cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [H... 1054 0.0
gi|61676108 cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [H... 969 0.0
gi|239751150 PREDICTED: hypothetical protein XP_002347731 [Homo ... 504 e-143
gi|222537719 ATP binding domain 3 [Homo sapiens] 37 0.043
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 36 0.074
gi|206597502 NESH protein isoform 2 [Homo sapiens] 36 0.096
gi|7705981 NESH protein isoform 1 [Homo sapiens] 36 0.096
gi|148613882 homeobox A4 [Homo sapiens] 34 0.28
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase... 34 0.28
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 34 0.37
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 33 0.62
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 33 0.62
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 33 0.62
gi|84490388 R-spondin1 [Homo sapiens] 33 0.81
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens] 33 0.81
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 33 0.81
gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo s... 33 0.81
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 33 0.81
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 32 1.1
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 32 1.1
gi|13435397 PHD finger protein 1 isoform b [Homo sapiens] 32 1.1
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 32 1.1
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 32 1.1
gi|38788260 bromodomain PHD finger transcription factor isoform ... 32 1.1
gi|38788274 bromodomain PHD finger transcription factor isoform ... 32 1.1
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 32 1.1
gi|26638655 potassium voltage-gated channel KQT-like protein 4 i... 32 1.4
gi|26638653 potassium voltage-gated channel KQT-like protein 4 i... 32 1.4
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 32 1.4
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 32 1.8
>gi|61676106 cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Homo
sapiens]
Length = 515
Score = 1054 bits (2726), Expect = 0.0
Identities = 515/515 (100%), Positives = 515/515 (100%)
Query: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
Query: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
Query: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD
Sbjct: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
Query: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST
Sbjct: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
Query: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP
Sbjct: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
Query: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLPSLDPLP 480
IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLPSLDPLP
Sbjct: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDLPSLDPLP 480
Query: 481 PYILAEAQLRTQRAWGLQEIRDCLIEDSDDEAGQS 515
PYILAEAQLRTQRAWGLQEIRDCLIEDSDDEAGQS
Sbjct: 481 PYILAEAQLRTQRAWGLQEIRDCLIEDSDDEAGQS 515
>gi|61676108 cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Homo
sapiens]
Length = 485
Score = 969 bits (2505), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
Query: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
Query: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD
Sbjct: 241 LLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGD 300
Query: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST
Sbjct: 301 VVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPST 360
Query: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP
Sbjct: 361 VSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP 420
Query: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL 473
IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL
Sbjct: 421 IPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQACIEEQLCYSCRVNMKDL 473
>gi|239751150 PREDICTED: hypothetical protein XP_002347731 [Homo
sapiens]
Length = 248
Score = 504 bits (1298), Expect = e-143
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR
Sbjct: 1 MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR 60
Query: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG
Sbjct: 61 AMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACG 120
Query: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS
Sbjct: 121 QSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDS 180
Query: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE
Sbjct: 181 FLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE 240
Query: 241 LLQTLR 246
LLQTLR
Sbjct: 241 LLQTLR 246
>gi|222537719 ATP binding domain 3 [Homo sapiens]
Length = 348
Score = 37.0 bits (84), Expect = 0.043
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 28 CVKCKEAQPVVVIR-AGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSS 86
C C A+ + +G A C CF A + + + RL+ PG V + SGG S+
Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDST 65
Query: 87 SMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHV 146
VL + + A RL ++ VDEG R LA V+ P V
Sbjct: 66 -----VLAHVLRALAPRLGISLQLVAVDEGIG-----GYRDAALAAVRRQAARWELPLTV 115
Query: 147 VALEEVF 153
VA E++F
Sbjct: 116 VAYEDLF 122
Score = 35.4 bits (80), Expect = 0.13
Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 15/150 (10%)
Query: 245 LRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVV- 303
LR + AR G + ++TG + +A ++ N G LA G G +
Sbjct: 150 LRRRALEEGARRVGATHIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSPGEGGALPR 209
Query: 304 VRPMRDHTLKEVAFYNRL-----FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFP 358
RP++ + KEV Y FS V+ APE H + RL+ P
Sbjct: 210 CRPLQFASQKEVVLYAHFRRLDYFSEECVY-------APEAFRGHA--RDLLKRLEAARP 260
Query: 359 STVSTVYRTSEKLVKGPRDGPAAGDSGPRC 388
S V + ++E+L P P + RC
Sbjct: 261 SAVLDLVHSAERLALAPAARPPRPGACSRC 290
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 36.2 bits (82), Expect = 0.074
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Query: 358 PSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAA----DSATAFGAQTSSR 413
P+ S +RT ++ + P+ PA G R + D A + A A A TSS
Sbjct: 75 PAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSG 134
Query: 414 LSQMQSPIPLTETRTPPGPCCSPGVGWAQRCGQGACRREDPQ 455
TE R P P C P G QR G G D Q
Sbjct: 135 HR--------TEKRKPQQPQCRPAAGTGQRRGSGCSPSADQQ 168
>gi|206597502 NESH protein isoform 2 [Homo sapiens]
Length = 360
Score = 35.8 bits (81), Expect = 0.096
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
G GG P P +G+ PP PPL P +L PP PA E +
Sbjct: 213 GVGGAPTP-KGQAAPPAPPL-PSSLDPPPPPAAVEVFQR 249
>gi|7705981 NESH protein isoform 1 [Homo sapiens]
Length = 366
Score = 35.8 bits (81), Expect = 0.096
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
G GG P P +G+ PP PPL P +L PP PA E +
Sbjct: 219 GVGGAPTP-KGQAAPPAPPL-PSSLDPPPPPAAVEVFQR 255
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 34.3 bits (77), Expect = 0.28
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 179 DSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNLARPPAP 219
+ + Q GA GGPG G +QPP PP L +P P
Sbjct: 21 EEYAQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLP 61
>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2
[Homo sapiens]
Length = 883
Score = 34.3 bits (77), Expect = 0.28
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEE---LLQTL 245
G GPGP + PP PP P RPP A+TE + +F +E +L++
Sbjct: 58 GGAAGPGPAR----PPVPPRPP----RPPETARTEPVVLVFVESAYSQLGQEIVAILESS 109
Query: 246 RTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL 279
R +A G +T ++ R + + NL
Sbjct: 110 RFRYSTELAPGRGDMPTLTDNTHGRYVLVIYENL 143
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 33.9 bits (76), Expect = 0.37
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAP 219
G GG P P + PP+PPL P PP P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGP 252
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 33.1 bits (74), Expect = 0.62
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
G G GPG + + QPP PQ +P AP Q + Q
Sbjct: 904 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 942
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 33.1 bits (74), Expect = 0.62
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
G G GPG + + QPP PQ +P AP Q + Q
Sbjct: 911 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 949
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 33.1 bits (74), Expect = 0.62
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 189 GAGGGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQ 227
G G GPG + + QPP PQ +P AP Q + Q
Sbjct: 926 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQ 964
>gi|84490388 R-spondin1 [Homo sapiens]
Length = 263
Score = 32.7 bits (73), Expect = 0.81
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 17/118 (14%)
Query: 27 KCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFR----------AMLGKNRLIFPGEKVL 76
KC+KCK FC C + Y+HK R A G P + +
Sbjct: 93 KCIKCKIEHCEACFSHN--FCTKCKEGLYLHKGRCYPACPEGSSAANGTMECSSPAQCEM 150
Query: 77 LAWS-GGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEV 133
WS GP S Q L G + S +R R V V + AAC + E R T+ V
Sbjct: 151 SEWSPWGPCSKK---QQLCGFRRGSEERTRRVLHAP-VGDHAACSDTKETRRCTVRRV 204
>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
Length = 478
Score = 32.7 bits (73), Expect = 0.81
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 190 AGGGPGPTQGEEQPPQPPLDPQNLARPPAPA 220
AGG PGP G PP PP P + AR P A
Sbjct: 6 AGGAPGPAPGPAGPP-PPAAPTSAARAPPQA 35
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 32.7 bits (73), Expect = 0.81
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 58 KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
KF K ++++ G+K G S S+ +W+ L ++D + R + G+ DE A
Sbjct: 268 KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 321
Query: 118 ACGQSLEERSKTLAEVKPILQ 138
C EE KTL + + + +
Sbjct: 322 GCSSVDEESYKTLKQQEEVFR 342
>gi|38146109 arginine/serine-rich coiled-coil 2 isoform c [Homo
sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.81
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 58 KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
KF K ++++ G+K G S S+ +W+ L ++D + R + G+ DE A
Sbjct: 95 KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 148
Query: 118 ACGQSLEERSKTLAEVKPILQ 138
C EE KTL + + + +
Sbjct: 149 GCSSVDEESYKTLKQQEEVFR 169
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 32.7 bits (73), Expect = 0.81
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 58 KFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGA 117
KF K ++++ G+K G S S+ +W+ L ++D + R + G+ DE A
Sbjct: 327 KFAEQEKKRKMLWQGKK-----EGDKSQSAEIWEKLNFGNKDQNVKFRKLMGIKSEDE-A 380
Query: 118 ACGQSLEERSKTLAEVKPILQ 138
C EE KTL + + + +
Sbjct: 381 GCSSVDEESYKTLKQQEEVFR 401
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 14/55 (25%)
Query: 187 VLGAGGGPGPTQG--------EEQPPQPPLD------PQNLARPPAPAQTEALSQ 227
++GAG GP+QG E+ P PPL+ PQ +PP+ AQT + Q
Sbjct: 654 LVGAGVPAGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQ 708
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 14/55 (25%)
Query: 187 VLGAGGGPGPTQG--------EEQPPQPPLD------PQNLARPPAPAQTEALSQ 227
++GAG GP+QG E+ P PPL+ PQ +PP+ AQT + Q
Sbjct: 732 LVGAGVPAGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQ 786
>gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]
Length = 567
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 381 AGDSGP---RCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIP-LTETRTPPGPCC-- 434
+GDSGP L D SA +SS +S SP P L PP P C
Sbjct: 464 SGDSGPPDRSPLELHIGFPTDIPKSAPHSMTASSSSVS---SPSPGLPRRSAPPSPLCRS 520
Query: 435 -SPGVGWAQRCGQGACRREDP 454
SPG G R G G R DP
Sbjct: 521 LSPGTGGGVRGGVGYLSRGDP 541
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 188 LGAGGGPGPTQGE--EQPPQPPLDPQNLARPPAPAQ 221
LG G G Q +QPPQPP+ P N ++P AQ
Sbjct: 1073 LGMFGNSGAAQARTMQQPPQPPVQPLNSSQPSLRAQ 1108
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 188 LGAGGGPGPTQGE--EQPPQPPLDPQNLARPPAPAQ 221
LG G G Q +QPPQPP+ P N ++P AQ
Sbjct: 1076 LGMFGNSGAAQARTMQQPPQPPVQPLNSSQPSLRAQ 1111
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 195 GPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTH 248
GP + + Q QP PQ +P +PAQ E +Q +T + + TH
Sbjct: 2390 GPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTH 2443
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 195 GPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTH 248
GP + + Q QP PQ +P +PAQ E +Q +T + + TH
Sbjct: 2264 GPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTH 2317
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 32.3 bits (72), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 193 GPGPTQG--EEQPPQPPLDPQNLARPPAPAQT 222
GPG +G E++ P PP DP ++PP P T
Sbjct: 10 GPGAQEGTAEQRSPPPPRDPMPSSQPPPPTPT 41
>gi|26638655 potassium voltage-gated channel KQT-like protein 4
isoform b [Homo sapiens]
Length = 641
Score = 32.0 bits (71), Expect = 1.4
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 378 GPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIPLTETRTPPGPCCSPG 437
GP GD+ PR L AL ++ A G + RL + SP+P P P PG
Sbjct: 12 GPPPGDA-PRAELV--ALTAVQSEQGEAGGGGSPRRLGLLGSPLP------PGAPLPGPG 62
Query: 438 VGWAQRCGQ 446
G CGQ
Sbjct: 63 SGSGSACGQ 71
>gi|26638653 potassium voltage-gated channel KQT-like protein 4
isoform a [Homo sapiens]
Length = 695
Score = 32.0 bits (71), Expect = 1.4
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 378 GPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSPIPLTETRTPPGPCCSPG 437
GP GD+ PR L AL ++ A G + RL + SP+P P P PG
Sbjct: 12 GPPPGDA-PRAELV--ALTAVQSEQGEAGGGGSPRRLGLLGSPLP------PGAPLPGPG 62
Query: 438 VGWAQRCGQ 446
G CGQ
Sbjct: 63 SGSGSACGQ 71
>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
sapiens]
Length = 410
Score = 32.0 bits (71), Expect = 1.4
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 16/63 (25%)
Query: 188 LGAGG-----GPGPTQGEEQ---PPQPPLDPQNL--------ARPPAPAQTEALSQLFCS 231
LGAGG GP G E PP PPL P ++ PPA + A S FC
Sbjct: 82 LGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCK 141
Query: 232 VRT 234
+T
Sbjct: 142 EKT 144
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 31.6 bits (70), Expect = 1.8
Identities = 54/220 (24%), Positives = 76/220 (34%), Gaps = 40/220 (18%)
Query: 13 PEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDA--FCRDCFKAFYVHKFRAMLGKNRLIF 70
P P AP PS + P GD C C+K F K + L ++++I
Sbjct: 316 PPATPVAPAPSADGSAAPAGVGVPPPATGGGDGPFACPLCWKVF---KKPSHLHQHQIIH 372
Query: 71 PGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTL 130
GEK + S S + + + SA LR G+ CG++ + S L
Sbjct: 373 TGEKPF-SCSVCSKSFNRRESLKRHVKTHSADLLRLPCGI--------CGKAFRDASYLL 423
Query: 131 AEVKPILQA-TGFPWHVVALE---EVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQH 186
A G P V + + +S P S+L +KAA H
Sbjct: 424 KHQAAHAGAGAGGPRPVYPCDLCGKSYSAPQSLL------------RHKAA--------H 463
Query: 187 VLGAGGGPGPTQGEEQPPQPP--LDPQNLARPPAPAQTEA 224
A P G PQPP P PP P T++
Sbjct: 464 APPAAAAEAPKDGAASAPQPPPTFPPGPYLLPPDPPTTDS 503
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,258,799
Number of Sequences: 37866
Number of extensions: 1286416
Number of successful extensions: 9993
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 9506
Number of HSP's gapped (non-prelim): 574
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.