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Search of human proteins with 61676104
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61676104 zinc finger protein 789 isoform 2 [Homo sapiens]
(62 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61676104 zinc finger protein 789 isoform 2 [Homo sapiens] 135 7e-33
gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens] 112 8e-26
gi|116875834 zinc finger protein 74 [Homo sapiens] 65 1e-11
gi|33438600 zinc finger protein 713 [Homo sapiens] 65 2e-11
gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens] 65 2e-11
gi|145701019 zinc finger protein 655 isoform b [Homo sapiens] 63 4e-11
gi|13129036 zinc finger protein 655 isoform b [Homo sapiens] 63 4e-11
gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens] 62 1e-10
gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens] 62 1e-10
gi|117938301 zinc finger protein 846 [Homo sapiens] 61 2e-10
gi|37537689 zinc finger protein 354A [Homo sapiens] 60 5e-10
gi|7706507 zinc finger protein 274 isoform a [Homo sapiens] 59 6e-10
gi|93004100 zinc finger protein 642 [Homo sapiens] 59 6e-10
gi|156627557 zinc finger protein 554 [Homo sapiens] 59 8e-10
gi|32699015 zinc finger protein 454 [Homo sapiens] 59 8e-10
gi|149192841 zinc finger protein 527 [Homo sapiens] 59 1e-09
gi|14249456 zinc finger protein 514 [Homo sapiens] 59 1e-09
gi|38524600 zinc finger protein 667 [Homo sapiens] 59 1e-09
gi|239751764 PREDICTED: hypothetical protein XP_002347975 isofor... 58 1e-09
gi|21686997 zinc finger protein 519 [Homo sapiens] 58 1e-09
gi|190194429 zinc finger protein 267 [Homo sapiens] 58 1e-09
gi|31340735 zinc finger protein 445 [Homo sapiens] 58 1e-09
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens] 58 2e-09
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens] 58 2e-09
gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo... 58 2e-09
gi|19743801 zinc finger protein 274 isoform c [Homo sapiens] 58 2e-09
gi|21362078 zinc finger protein 649 [Homo sapiens] 58 2e-09
gi|28274682 zinc finger protein 33A isoform b [Homo sapiens] 58 2e-09
gi|110347446 zinc finger protein 33A isoform a [Homo sapiens] 58 2e-09
gi|47271376 zinc finger protein 615 [Homo sapiens] 58 2e-09
>gi|61676104 zinc finger protein 789 isoform 2 [Homo sapiens]
Length = 62
Score = 135 bits (340), Expect = 7e-33
Identities = 62/62 (100%), Positives = 62/62 (100%)
Query: 1 MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVYFQFDAAIP 60
MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVYFQFDAAIP
Sbjct: 1 MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVYFQFDAAIP 60
Query: 61 LC 62
LC
Sbjct: 61 LC 62
>gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]
Length = 425
Score = 112 bits (279), Expect = 8e-26
Identities = 54/62 (87%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
Query: 1 MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVYFQFDAAIP 60
MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL FQF
Sbjct: 1 MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL-GFQFPKPEM 59
Query: 61 LC 62
+C
Sbjct: 60 IC 61
>gi|116875834 zinc finger protein 74 [Homo sapiens]
Length = 644
Score = 65.1 bits (157), Expect = 1e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
P AR KE +SF+DVA+ FT+EEWG L+ Q+ LYRDVMLENY+N++ L
Sbjct: 35 PEARSKESVSFKDVAVDFTQEEWGQLDSPQRALYRDVMLENYQNLLAL 82
>gi|33438600 zinc finger protein 713 [Homo sapiens]
Length = 430
Score = 64.7 bits (156), Expect = 2e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 6 RGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
R +E L+F+DVA+ FTREEW L QK+LYRDVMLENYRN+V L Y
Sbjct: 14 RSQESLTFQDVAVDFTREEWDQLYPAQKNLYRDVMLENYRNLVALGY 60
>gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens]
Length = 626
Score = 64.7 bits (156), Expect = 2e-11
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
PP K LL+FEDVA++FT+EEW +L+ Q+ LY+DVM+ENY N+V L
Sbjct: 6 PPPESKGLLTFEDVAVFFTQEEWDYLDPAQRSLYKDVMMENYGNLVSL 53
>gi|145701019 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 63.2 bits (152), Expect = 4e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
AR +E ++FEDVA++ TREEWG+L+ Q+DLYR+VMLENY N+V L
Sbjct: 71 ARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
>gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 63.2 bits (152), Expect = 4e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
AR +E ++FEDVA++ TREEWG+L+ Q+DLYR+VMLENY N+V L
Sbjct: 71 ARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
>gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens]
Length = 131
Score = 61.6 bits (148), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
A+ +EL++FEDVA+YF R+EW L Q+DLYRDVMLENY N+ L
Sbjct: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
>gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens]
Length = 446
Score = 61.6 bits (148), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
A+ +EL++FEDVA+YF R+EW L Q+DLYRDVMLENY N+ L
Sbjct: 45 AKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
>gi|117938301 zinc finger protein 846 [Homo sapiens]
Length = 533
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/43 (60%), Positives = 37/43 (86%)
Query: 8 KELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
+ L++FEDVA+ FT+EEW L+ Q+DLYRDVMLENY+N+++L
Sbjct: 5 QHLVTFEDVAVDFTQEEWTLLDQAQRDLYRDVMLENYKNLIIL 47
>gi|37537689 zinc finger protein 354A [Homo sapiens]
Length = 605
Score = 59.7 bits (143), Expect = 5e-10
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
AR + L+FEDVA+ FTR+EW L Q++LYRDVMLENYRN+V L
Sbjct: 8 ARPQVSLTFEDVAVLFTRDEWRKLAPSQRNLYRDVMLENYRNLVSL 53
>gi|7706507 zinc finger protein 274 isoform a [Homo sapiens]
Length = 621
Score = 59.3 bits (142), Expect = 6e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
P A E ++FEDV + FT EEWG L+ QK LYR+VMLENYRN+V + Y
Sbjct: 6 PTAWSCEPVTFEDVTLGFTPEEWGLLDLKQKSLYREVMLENYRNLVSVEY 55
Score = 45.4 bits (106), Expect = 1e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 8 KELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMV 48
+E ++F+DVA+ F+REEWG L Q+ YRDVMLE + ++V
Sbjct: 252 EEPVTFQDVAVDFSREEWGLLGPTQRTEYRDVMLETFGHLV 292
>gi|93004100 zinc finger protein 642 [Homo sapiens]
Length = 526
Score = 59.3 bits (142), Expect = 6e-10
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
P A +ELL+F+D+++ FT+EEWG L ++LYR+VMLENY N+V + Y
Sbjct: 68 PTAESQELLTFKDISIDFTQEEWGQLAPAHQNLYREVMLENYSNLVSVGY 117
>gi|156627557 zinc finger protein 554 [Homo sapiens]
Length = 538
Score = 58.9 bits (141), Expect = 8e-10
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 4 PARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
P +EL++FEDV+M F++EEW L QK+LYR+VMLENYRN+V L
Sbjct: 38 PRWSQELVTFEDVSMDFSQEEWELLEPAQKNLYREVMLENYRNVVSL 84
>gi|32699015 zinc finger protein 454 [Homo sapiens]
Length = 522
Score = 58.9 bits (141), Expect = 8e-10
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 4 PARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
P +E ++F+DVA+ FT+EEWG L+ Q+ LYRDVMLENY N+V L
Sbjct: 7 PTMVQESVTFKDVAILFTQEEWGQLSPAQRALYRDVMLENYSNLVSL 53
>gi|149192841 zinc finger protein 527 [Homo sapiens]
Length = 609
Score = 58.5 bits (140), Expect = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
A + L++F DVA+ F++EEW L QKDLYRDVMLENYRN+V L
Sbjct: 8 AMSQGLVTFRDVALDFSQEEWEWLKPSQKDLYRDVMLENYRNLVWL 53
>gi|14249456 zinc finger protein 514 [Homo sapiens]
Length = 400
Score = 58.5 bits (140), Expect = 1e-09
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 11 LSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
++FEDVA+ F++ EWG LN QKDLYR+VMLEN+RN+ +L
Sbjct: 1 MTFEDVAVEFSQWEWGQLNPAQKDLYREVMLENFRNLAIL 40
>gi|38524600 zinc finger protein 667 [Homo sapiens]
Length = 610
Score = 58.5 bits (140), Expect = 1e-09
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Query: 3 PPARGKEL----LSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
P ARGK ++F D+A+YF++EEW L+ QKDLY DVMLENYRN+V L
Sbjct: 2 PSARGKSKSKAPITFGDLAIYFSQEEWEWLSPIQKDLYEDVMLENYRNLVSL 53
>gi|239751764 PREDICTED: hypothetical protein XP_002347975 isoform
3 [Homo sapiens]
Length = 543
Score = 58.2 bits (139), Expect = 1e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 9 ELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
E L F+DV +YF+++EW L+ QKDLYRDVMLENY N+VLL
Sbjct: 3 EGLKFKDVVIYFSQKEWECLHSAQKDLYRDVMLENYGNLVLL 44
>gi|21686997 zinc finger protein 519 [Homo sapiens]
Length = 540
Score = 58.2 bits (139), Expect = 1e-09
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 9 ELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVYFQF 55
ELL+F DVA+ F+ EEW L+ Q++LYRDVMLENYRN+V L + +
Sbjct: 2 ELLTFRDVAIEFSPEEWKCLDPAQQNLYRDVMLENYRNLVSLAVYSY 48
>gi|190194429 zinc finger protein 267 [Homo sapiens]
Length = 743
Score = 58.2 bits (139), Expect = 1e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 10 LLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
LL+F DVA+ F+ EEW HL QK+LY+DVMLENYRN+V L
Sbjct: 3 LLTFRDVAVEFSLEEWEHLEPAQKNLYQDVMLENYRNLVSL 43
>gi|31340735 zinc finger protein 445 [Homo sapiens]
Length = 1031
Score = 58.2 bits (139), Expect = 1e-09
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 5 ARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLV 51
A+ +E ++F+DV + F+++EWG L+ Q++LYRDVMLENYRNM LV
Sbjct: 228 AQLQETMTFKDVEVTFSQDEWGWLDSAQRNLYRDVMLENYRNMASLV 274
>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
Length = 674
Score = 57.8 bits (138), Expect = 2e-09
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 11 LSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
LSF DVA+ F++EEW L+ GQK LYRDVMLENYRN+V L
Sbjct: 8 LSFSDVAIEFSQEEWKCLDPGQKALYRDVMLENYRNLVSL 47
>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
Length = 661
Score = 57.8 bits (138), Expect = 2e-09
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 11 LSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
LSF DVA+ F++EEW L+ GQK LYRDVMLENYRN+V L
Sbjct: 8 LSFSDVAIEFSQEEWKCLDPGQKALYRDVMLENYRNLVSL 47
>gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1102
Score = 57.8 bits (138), Expect = 2e-09
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
P +R LL+F D+A+ F+ EEW L+ Q++LYRDVMLENYRN+V L
Sbjct: 51 PGSREMRLLTFRDIAIEFSLEEWQCLDCAQQNLYRDVMLENYRNLVSL 98
Score = 49.7 bits (117), Expect = 5e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 8 KELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLL 50
K +L+F DVA+ F+ EEW L+ Q+ LYRDVMLENY N+ L
Sbjct: 440 KRVLTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYGNLFSL 482
>gi|19743801 zinc finger protein 274 isoform c [Homo sapiens]
Length = 653
Score = 57.8 bits (138), Expect = 2e-09
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 3 PPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMV 48
P A E ++FEDV + FT EEWG L+ QK LYR+VMLENYRN+V
Sbjct: 6 PTAWSCEPVTFEDVTLGFTPEEWGLLDLKQKSLYREVMLENYRNLV 51
Score = 45.4 bits (106), Expect = 1e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 8 KELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMV 48
+E ++F+DVA+ F+REEWG L Q+ YRDVMLE + ++V
Sbjct: 284 EEPVTFQDVAVDFSREEWGLLGPTQRTEYRDVMLETFGHLV 324
>gi|21362078 zinc finger protein 649 [Homo sapiens]
Length = 505
Score = 57.8 bits (138), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 6 RGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
+ +E L+ EDVA+ FT EEW L+ QKDLYRDVMLENY N+V + Y
Sbjct: 3 KAQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVSVGY 49
>gi|28274682 zinc finger protein 33A isoform b [Homo sapiens]
Length = 810
Score = 57.8 bits (138), Expect = 2e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 6 RGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
+ +E +SF+DV + FT+EEW HL+ Q+ LYRDVMLENY N+V + Y
Sbjct: 7 KSQESVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVGY 53
>gi|110347446 zinc finger protein 33A isoform a [Homo sapiens]
Length = 811
Score = 57.8 bits (138), Expect = 2e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 6 RGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
+ +E +SF+DV + FT+EEW HL+ Q+ LYRDVMLENY N+V + Y
Sbjct: 7 KSQESVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVGY 53
>gi|47271376 zinc finger protein 615 [Homo sapiens]
Length = 731
Score = 57.8 bits (138), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 6 RGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLVY 52
+ +E L+ EDVA+ FT EEW L+ QKDLYRDVMLENY N+V + Y
Sbjct: 3 QAQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVAVGY 49
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.144 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,302,553
Number of Sequences: 37866
Number of extensions: 66038
Number of successful extensions: 720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 189
Number of HSP's gapped (non-prelim): 532
length of query: 62
length of database: 18,247,518
effective HSP length: 35
effective length of query: 27
effective length of database: 16,922,208
effective search space: 456899616
effective search space used: 456899616
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.