FAM107A 33870

Name: FAM107A	Sequence: fasta or formatted (144aa)		NCBI GI: 6005924
Description: downregulated in renal cell carcinoma		Referenced in: Kidney
Other entries for this name: alt mRNA [144aa] downregulated in renal cell carcinoma
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 6 1 C cysteine 0.7 1 1 D aspartate 2.1 3 1 E glutamate 16.0 23 2 F phenylalanine 1.4 2 1 G glycine 2.8 4 2 H histidine 3.5 5 1 I isoleucine 4.2 6 1 K lysine 9.0 13 4 L leucine 13.9 20 2 M methionine 2.1 3 1 N asparagine 4.2 6 1 P proline 6.2 9 2 Q glutamine 6.2 9 2 R arginine 13.9 20 3 S serine 3.5 5 1 T threonine 1.4 2 1 V valine 2.8 4 1 W tryptophan 0.7 1 1 Y tyrosine 1.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 downregulated in renal cell carcinoma FAM107A 1.000 downregulated in renal cell carcinoma FAM107B 0.426 hypothetical protein LOC83641 TCHH 0.057 trichohyalin KIF16B 0.049 kinesin-like motor protein C20orf23 MINK1 0.045 misshapen/NIK-related kinase isoform 4 MINK1 0.045 misshapen/NIK-related kinase isoform 2 MINK1 0.045 misshapen/NIK-related kinase isoform 3 MINK1 0.045 misshapen/NIK-related kinase isoform 1 INCENP 0.045 inner centromere protein antigens 135/155kDa isofor... INCENP 0.045 inner centromere protein antigens 135/155kDa isofor... STK10 0.038 serine/threonine kinase 10 MYO10 0.038 myosin X PHLDB1 0.038 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.038 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.038 pleckstrin homology-like domain, family B, member 1 ... GPS2 0.038 G protein pathway suppressor 2 SUV39H1 0.034 suppressor of variegation 3-9 homolog 1 ITSN1 0.034 intersectin 1 isoform ITSN-s ITSN1 0.034 intersectin 1 isoform ITSN-l ITSN2 0.034 intersectin 2 isoform 3 ITSN2 0.034 intersectin 2 isoform 1 ITSN2 0.034 intersectin 2 isoform 2 LOC100131202 0.034 PREDICTED: hypothetical protein PLEC1 0.034 plectin 1 isoform 11 PLEC1 0.034 plectin 1 isoform 10 PLEC1 0.034 plectin 1 isoform 8 PLEC1 0.034 plectin 1 isoform 7 PLEC1 0.034 plectin 1 isoform 6 PLEC1 0.034 plectin 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.