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Search of human proteins with 5901980
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5901980 heat shock transcription factor 2 binding protein
[Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5901980 heat shock transcription factor 2 binding protein [Ho... 646 0.0
gi|221316624 dystonin isoform 4 [Homo sapiens] 45 1e-04
gi|221316622 dystonin isoform 3 [Homo sapiens] 45 1e-04
gi|221316618 dystonin isoform 2 [Homo sapiens] 45 1e-04
gi|34577047 dystonin isoform 1 [Homo sapiens] 45 1e-04
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 45 1e-04
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 42 6e-04
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 42 0.001
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 41 0.001
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 40 0.002
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 40 0.003
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 40 0.003
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 39 0.008
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 39 0.008
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 39 0.008
gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo sapi... 39 0.008
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 38 0.011
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 38 0.014
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 37 0.019
gi|50083279 centrosome protein 4 [Homo sapiens] 37 0.019
gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens] 37 0.025
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 37 0.025
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 37 0.025
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 37 0.025
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 37 0.025
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 37 0.025
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 37 0.025
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 37 0.025
gi|45505178 cancer antigen 1 [Homo sapiens] 37 0.032
gi|215982794 myosin VA isoform 2 [Homo sapiens] 37 0.032
>gi|5901980 heat shock transcription factor 2 binding protein [Homo
sapiens]
Length = 334
Score = 646 bits (1666), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MGEAGAAEEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
MGEAGAAEEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV
Sbjct: 1 MGEAGAAEEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
Query: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC
Sbjct: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
Query: 121 TEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDES 180
TEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDES
Sbjct: 121 TEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDES 180
Query: 181 QFVFALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLKPGQCTKLKVLMLMSLYNV 240
QFVFALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLKPGQCTKLKVLMLMSLYNV
Sbjct: 181 QFVFALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLKPGQCTKLKVLMLMSLYNV 240
Query: 241 SINLKGLKYISESPGFIPLLWWLLSDPDAEVCLHVLRLVQSVVLEPEVFSKSASEFRSSL 300
SINLKGLKYISESPGFIPLLWWLLSDPDAEVCLHVLRLVQSVVLEPEVFSKSASEFRSSL
Sbjct: 241 SINLKGLKYISESPGFIPLLWWLLSDPDAEVCLHVLRLVQSVVLEPEVFSKSASEFRSSL 300
Query: 301 PLQRILAMSKSRNPRLQTAAQELLEDLRTLEHNV 334
PLQRILAMSKSRNPRLQTAAQELLEDLRTLEHNV
Sbjct: 301 PLQRILAMSKSRNPRLQTAAQELLEDLRTLEHNV 334
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKE 68
E ++ +EE K + + L V +FL NGE L K ++E+ L +
Sbjct: 1621 ELKKYQSKQEELQKDMQGSAQALAEVVKNTENFLKE--NGEKLSQEDKA-LIEQKLNEAK 1677
Query: 69 QELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ EQL + E K L+ V I+E+ EK+A +QL E+K ++
Sbjct: 1678 IKCEQLNLKAEQSKKELDKVVTTAIKEETEKVAAVKQLEESKTKI 1722
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKE 68
E ++ +EE K + + L V +FL NGE L K ++E+ L +
Sbjct: 1632 ELKKYQSKQEELQKDMQGSAQALAEVVKNTENFLKE--NGEKLSQEDKA-LIEQKLNEAK 1688
Query: 69 QELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ EQL + E K L+ V I+E+ EK+A +QL E+K ++
Sbjct: 1689 IKCEQLNLKAEQSKKELDKVVTTAIKEETEKVAAVKQLEESKTKI 1733
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKE 68
E ++ +EE K + + L V +FL NGE L K ++E+ L +
Sbjct: 1770 ELKKYQSKQEELQKDMQGSAQALAEVVKNTENFLKE--NGEKLSQEDKA-LIEQKLNEAK 1826
Query: 69 QELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ EQL + E K L+ V I+E+ EK+A +QL E+K ++
Sbjct: 1827 IKCEQLNLKAEQSKKELDKVVTTAIKEETEKVAAVKQLEESKTKI 1871
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKE 68
E ++ +EE K + + L V +FL NGE L K ++E+ L +
Sbjct: 1592 ELKKYQSKQEELQKDMQGSAQALAEVVKNTENFLKE--NGEKLSQEDKA-LIEQKLNEAK 1648
Query: 69 QELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ EQL + E K L+ V I+E+ EK+A +QL E+K ++
Sbjct: 1649 IKCEQLNLKAEQSKKELDKVVTTAIKEETEKVAAVKQLEESKTKI 1693
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKE 68
E ++ +EE K + + L V +FL NGE L K ++E+ L +
Sbjct: 1266 ELKKYQSKQEELQKDMQGSAQALAEVVKNTENFLKE--NGEKLSQEDKA-LIEQKLNEAK 1322
Query: 69 QELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ EQL + E K L+ V I+E+ EK+A +QL E+K ++
Sbjct: 1323 IKCEQLNLKAEQSKKELDKVVTTAIKEETEKVAAVKQLEESKTKI 1367
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 42.4 bits (98), Expect = 6e-04
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 3 EAGAAEEACRHMGTKEE--FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
EAG A A M K E F K+R+ DLE T + L + V E +++ +
Sbjct: 1156 EAGGATSAQIEMNKKREAEFQKMRR-DLEESTLQHEATAAALRKKHADSVAELGEQIDSL 1214
Query: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
++ ++ E+E +LKM+ + +ETV +K L QL+E K + +Q
Sbjct: 1215 QRVKQKLEKEKSELKMEINDLASNMETVSKAKANFEKMCRTLEDQLSEIKTKEEEQQRLI 1274
Query: 121 TEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDES 180
E+ A L + S E + + D + S Q ++ L ++E +S
Sbjct: 1275 NELSAQKARL---HTESGEFSRQLDEKDAMVSQLSRGKQAFTQQIEELKRQLEEETKAKS 1331
Query: 181 QFVFAL 186
AL
Sbjct: 1332 TLAHAL 1337
Score = 33.1 bits (74), Expect = 0.36
Identities = 41/176 (23%), Positives = 82/176 (46%), Gaps = 36/176 (20%)
Query: 21 VKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERK-----EQ------ 69
++ +K+ L+TE+ ++++ E L+ + LK KNL+++ EQ
Sbjct: 1471 LEASQKESRSLSTELFKVKNAYE-----ESLDHLETLKRENKNLQQEISDLTEQIAEGGK 1525
Query: 70 ---ELEQLKMDCEHFKARLET----VQADNIREKKEKLALRQQLNEAKQQLLQQ-AEYCT 121
ELE++K +H K+ L+T +A E+ + L ++ +LN+ K ++ ++ AE
Sbjct: 1526 HIHELEKVKKQLDHEKSELQTSLEEAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDE 1585
Query: 122 EMGAAACTLLWGVSSSEEVVKA-ILGGDKALKFFSITGQTMESFVKSLDGDVQELD 176
E+ L V S + + A I + AL+ K ++GD+ E++
Sbjct: 1586 ELDQLKRNHLRVVESMQSTLDAEIRSRNDALR-----------IKKKMEGDLNEME 1630
Score = 31.2 bits (69), Expect = 1.4
Identities = 33/183 (18%), Positives = 75/183 (40%), Gaps = 14/183 (7%)
Query: 51 LESFQKLKIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAK 110
LE Q +++ + K++EL+QLK + +++ IR + + L +++++
Sbjct: 1567 LELNQVKSEIDRKIAEKDEELDQLKRNHLRVVESMQSTLDAEIRSRNDALRIKKKMEGDL 1626
Query: 111 QQLLQQAEYCTEMGAAACTLLWGVSSSEEVVK--------AILGGD---KALKFFSITGQ 159
++ Q + A A L + +++ ++K AI G D + L
Sbjct: 1627 NEMEIQLNHANRQAAEA---LRNLRNTQGILKDTQLHLDDAIRGQDDLKEQLAMVERRAN 1683
Query: 160 TMESFVKSLDGDVQELDSDESQFVFALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLG 219
M++ V+ L ++ + L V + L+N+ + L I Q+ G
Sbjct: 1684 LMQAEVEELRASLERTERGRKMAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQG 1743
Query: 220 DLK 222
+++
Sbjct: 1744 EME 1746
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/104 (23%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 12 RHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQEL 71
R++ +E ++ K+ + L + +++++ + ++ N + + L++ E+ E QE
Sbjct: 1159 RNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNN-LQDMKHLLQLKEEEEETNRQET 1217
Query: 72 EQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQ 115
E+LK + AR + ++AD R++++ L+++L +AK+Q+ Q
Sbjct: 1218 EKLKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQ 1261
Score = 32.0 bits (71), Expect = 0.79
Identities = 29/135 (21%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 46 LNGEVLESFQKLKIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQ 105
L E+ S + + ++ +L+RKE++ LK K +++ VQ + + E LR +
Sbjct: 1220 LKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDEDKLLRIK 1279
Query: 106 LNEAKQQLLQQAEYCTEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFV 165
+NE +++ Q +M L ++++V +AI ++A K ++ + +E
Sbjct: 1280 INELEKK-KNQCSQELDMKQRTIQQLKEQLNNQKVEEAIQQYERACKDLNVKEKIIEDMR 1338
Query: 166 KSLDGDVQ-ELDSDE 179
+L+ Q +++ D+
Sbjct: 1339 MTLEEQEQTQVEQDQ 1353
Score = 30.8 bits (68), Expect = 1.8
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 2 GEAGAAEEACRHMGTKEEFVKVRKKDL--ERLTTEVMQIRDFLPRILNGEVLESFQKLKI 59
G ++++ + + + V++ + E ++M+ D + + N E ++ + K+
Sbjct: 494 GPVKSSQDVSLDSNSNSKILNVKRATISWENSLEDLMEDEDLVEELENAEETQNVET-KL 552
Query: 60 VEKNLERKEQELEQLKMDCEHFKAR-----LETVQADNIREKKEKLALRQQLNEAKQQLL 114
++++L++ LE+ K H + R +E ++ I EKKEKL L ++ E Q
Sbjct: 553 LDEDLDKT---LEENKAFISHEEKRKLLDLIEDLKKKLINEKKEKLTLEFKIREEVTQEF 609
Query: 115 QQ 116
Q
Sbjct: 610 TQ 611
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 41.2 bits (95), Expect = 0.001
Identities = 37/180 (20%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 3 EAGAAEEACRHMGTKEEFVKVRKKDLERLTT---EVMQIR-DFLPRILNGEVLESFQKLK 58
E AE A + TKE ++V + ER+ T E+++++ D+ R+ + E+ + +
Sbjct: 116 EEALAESASCRLETKERELRVEAEHAERVLTLSREMLELKADYERRLQHLTSHEATPQGR 175
Query: 59 IVEKNLERKEQ-----ELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+ +++ E K + E++++ ++ + + + + D R+ +E A ++ NEA +Q
Sbjct: 176 LPQESPETKSEPGQGPEMQEVLLEVQRLRVENQQLSKDYARKAEELQATYERENEAIRQA 235
Query: 114 LQQAEYCTEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQ 173
+QQ + LW E ++ K F + +++ V+ L+GD++
Sbjct: 236 MQQ---------SVSQALWQWQEKESDLR---------KNFQVQESALQAQVRKLEGDLE 277
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 40.4 bits (93), Expect = 0.002
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 3 EAGAAEEACRHMGTKEE--FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
EAG A A M K E F K+R+ DLE T + L + V E +++ +
Sbjct: 1156 EAGGATSAQIEMNKKREAEFQKMRR-DLEEATLQHEATAATLRKKHADSVAELGEQIDNL 1214
Query: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
++ ++ E+E ++KM+ + + +ETV +K AL QL+E K + +Q
Sbjct: 1215 QRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSEIKTKEEEQQRLI 1274
Query: 121 TEMGAAACTL 130
++ A L
Sbjct: 1275 NDLTAQRARL 1284
Score = 36.6 bits (83), Expect = 0.032
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEV-MQIRDFLPRI-----LNGEVLESFQKLKIVEK 62
++ +G + + ++ K+ LE+ +E+ M+I D + G + + + L+
Sbjct: 1202 DSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLS 1261
Query: 63 NLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
++ KE+E ++L D +ARL+T + R+ EK L QL+ KQ QQ E
Sbjct: 1262 EIKTKEEEQQRLINDLTAQRARLQTESGEYSRQLDEKDTLVSQLSRGKQAFTQQIE 1317
Score = 29.3 bits (64), Expect = 5.2
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 3 EAGAAEEACRHMGTKEEFVKVR---KKDLERLTTEVMQIRDFLPRI--LNGEVLESFQKL 57
E A+++ R + T E K++ ++ L++L T + ++ I L ++ E +++
Sbjct: 1470 ELEASQKESRSLST--ELFKIKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRI 1527
Query: 58 KIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+EK ++ EQE +L+ E +A LE E+ + L ++ +LN+ K ++
Sbjct: 1528 HELEKIKKQVEQEKSELQAALEEAEASLE-------HEEGKILRIQLELNQVKSEV 1576
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 40.0 bits (92), Expect = 0.003
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 5 GAAEEACRHMGTKEEFVKV---RKKDLERLTTEVMQIRDFLPRILN--GEVLESFQK-LK 58
G EE H+ K++ + + R ++L+ TE ++ + L E+L+ +K L
Sbjct: 214 GLREETSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLT 273
Query: 59 IVEKNLERKEQELEQLKMDCEHFKARLETVQADNIRE------KKEKLALRQQLNEAKQQ 112
V+ +L +KE+ELE+ + + ++ + D +E + E L+ L EAKQQ
Sbjct: 274 QVQNSLLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQKLKNSLEEAKQQ 333
Query: 113 ---LLQQAEYCTEMGAAA 127
QQA C E A A
Sbjct: 334 ERLAAQQAAQCKEEAALA 351
Score = 28.9 bits (63), Expect = 6.7
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 25 KKDLERLTTEV-MQIRDFLPRILNGEVLESFQKLKIVEKNLERK---EQELEQLKMDCEH 80
K+ L++ E M++ D L RI + + K K+ E E E + EQLK EH
Sbjct: 425 KRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEH 484
Query: 81 FKARLETVQADNIREKKEKLALRQ---QLNEAKQQLLQQAEYCT 121
K ++A KK+ L++ +L E + L + + C+
Sbjct: 485 EKLMEGELEALRQEFKKKDKTLKENSRKLEEENENLRAELQCCS 528
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 40.0 bits (92), Expect = 0.003
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 5 GAAEEACRHMGTKEEFVKV---RKKDLERLTTEVMQIRDFLPRILN--GEVLESFQK-LK 58
G EE H+ K++ + + R ++L+ TE ++ + L E+L+ +K L
Sbjct: 359 GLREETSAHIERKDKDITILQCRLQELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLT 418
Query: 59 IVEKNLERKEQELEQLKMDCEHFKARLETVQADNIRE------KKEKLALRQQLNEAKQQ 112
V+ +L +KE+ELE+ + + ++ + D +E + E L+ L EAKQQ
Sbjct: 419 QVQNSLLKKEKELEKQQCMATELEMTVKEAKQDKSKEAECKALQAEVQKLKNSLEEAKQQ 478
Query: 113 ---LLQQAEYCTEMGAAA 127
QQA C E A A
Sbjct: 479 ERLAAQQAAQCKEEAALA 496
Score = 28.9 bits (63), Expect = 6.7
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 25 KKDLERLTTEV-MQIRDFLPRILNGEVLESFQKLKIVEKNLERK---EQELEQLKMDCEH 80
K+ L++ E M++ D L RI + + K K+ E E E + EQLK EH
Sbjct: 570 KRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEH 629
Query: 81 FKARLETVQADNIREKKEKLALRQ---QLNEAKQQLLQQAEYCT 121
K ++A KK+ L++ +L E + L + + C+
Sbjct: 630 EKLMEGELEALRQEFKKKDKTLKENSRKLEEENENLRAELQCCS 673
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 38.5 bits (88), Expect = 0.008
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 14 MGTKEEFVKVRKKDL---ERLTT-EVMQIRDFLPRILNGEVLESFQKL----KIVEKNLE 65
M +EE VKVR+K L RLT E +Q + ++ E L++ +L + + L
Sbjct: 848 MAKEEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRARLT 907
Query: 66 RKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQ 116
K+QELE++ C +AR+E + + EK ++Q + E ++QL ++
Sbjct: 908 AKKQELEEI---CHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEE 955
Score = 29.6 bits (65), Expect = 3.9
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 8 EEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERK 67
+ CR ++ F K R++ L + +L ++ N + F K+K + L+
Sbjct: 787 QACCRGYLARKAFAK-RQQQLTAMKVLQRNCAAYL-KLRNWQWWRLFTKVKPL---LQVS 841
Query: 68 EQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMGAAA 127
QE E + + E K R + + A+N + E L+ QL K QL +Q + TE+ A A
Sbjct: 842 RQEEEMMAKEEELVKVREKQLAAENRLTEME--TLQSQLMAEKLQLQEQLQAETELCAEA 899
Query: 128 CTLLWGVSSSEEVVKAILGGDKA-LKFFSITGQTMESFVKSLDGDVQELD 176
L +++ ++ ++ I +A ++ Q +++ K + ++QEL+
Sbjct: 900 EELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELE 949
Score = 29.6 bits (65), Expect = 3.9
Identities = 38/183 (20%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 8 EEACRHMGTKEEFVKVRKKDLERLTT---EVMQIRDFLPRILN------GEVLESFQKLK 58
E++ + T EE + +KDLE L+ E + D L + ++L +
Sbjct: 1374 EDSVGCLETAEEVKRKLQKDLEGLSQRHEEKVAAYDKLEKTKTRLQQELDDLLVDLDHQR 1433
Query: 59 IVEKNLERKEQELEQLKMDCEHFKARL----ETVQADNIREKKEKLALRQQLNEAKQQLL 114
NLE+K+++ +QL + + A+ + +A+ ++ + L+L + L EA +Q
Sbjct: 1434 QSACNLEKKQKKFDQLLAEEKTISAKYAEERDRAEAEAREKETKALSLARALEEAMEQKA 1493
Query: 115 Q----QAEYCTEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDG 170
+ ++ TEM +SS ++V K++ +K+ + + M++ ++ L+
Sbjct: 1494 ELERLNKQFRTEMEDL-------MSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELED 1546
Query: 171 DVQ 173
++Q
Sbjct: 1547 ELQ 1549
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 38.5 bits (88), Expect = 0.008
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 3 EAGAAEEACRHMGTKEE--FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
EAG A A M K E F K+R+ DLE T + L + V E +++ +
Sbjct: 1158 EAGGATSAQIEMNKKREAEFQKMRR-DLEEATLQHEATAATLRKKHADSVAELGEQIDNL 1216
Query: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
++ ++ E+E ++KM+ + + +ETV +K L QL+E K + +Q
Sbjct: 1217 QRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLI 1276
Query: 121 TEMGA 125
++ A
Sbjct: 1277 NDLTA 1281
Score = 38.1 bits (87), Expect = 0.011
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEV-MQIRDFLPRI-----LNGEVLESFQKLKIVEK 62
++ +G + + ++ K+ LE+ +E+ M+I D + G + + + L+
Sbjct: 1204 DSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLS 1263
Query: 63 NLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+ KE+E ++L D + RL+T + R+ EK AL QL+ KQ QQ E
Sbjct: 1264 ELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAFTQQIE 1319
Score = 30.8 bits (68), Expect = 1.8
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 3 EAGAAEEACRHMGTKEEFVKVR---KKDLERLTTEVMQIRDFLPRI--LNGEVLESFQKL 57
E A+++ R +GT E K++ ++ L++L T + ++ I L ++ E +++
Sbjct: 1472 ELEASQKEARSLGT--ELFKIKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRI 1529
Query: 58 KIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+EK ++ EQE CE +A LE +A E+ + L ++ +LN+ K ++
Sbjct: 1530 HELEKIKKQVEQE------KCE-LQAALEEAEASLEHEEGKILRIQLELNQVKSEV 1578
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 38.5 bits (88), Expect = 0.008
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 3 EAGAAEEACRHMGTKEE--FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
EAG A A M K E F K+R+ DLE T + L + V E +++ +
Sbjct: 1158 EAGGATSAQIEMNKKREAEFQKMRR-DLEEATLQHEATAATLRKKHADSVAELGEQIDNL 1216
Query: 61 EKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYC 120
++ ++ E+E ++KM+ + + +ETV +K L QL+E K + +Q
Sbjct: 1217 QRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLI 1276
Query: 121 TEMGA 125
++ A
Sbjct: 1277 NDLTA 1281
Score = 38.1 bits (87), Expect = 0.011
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 9 EACRHMGTKEEFVKVRKKDLERLTTEV-MQIRDFLPRI-----LNGEVLESFQKLKIVEK 62
++ +G + + ++ K+ LE+ +E+ M+I D + G + + + L+
Sbjct: 1204 DSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLS 1263
Query: 63 NLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+ KE+E ++L D + RL+T + R+ EK AL QL+ KQ QQ E
Sbjct: 1264 ELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAFTQQIE 1319
Score = 30.8 bits (68), Expect = 1.8
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 3 EAGAAEEACRHMGTKEEFVKVR---KKDLERLTTEVMQIRDFLPRI--LNGEVLESFQKL 57
E A+++ R +GT E K++ ++ L++L T + ++ I L ++ E +++
Sbjct: 1472 ELEASQKEARSLGT--ELFKIKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRI 1529
Query: 58 KIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+EK ++ EQE CE +A LE +A E+ + L ++ +LN+ K ++
Sbjct: 1530 HELEKIKKQVEQE------KCE-LQAALEEAEASLEHEEGKILRIQLELNQVKSEV 1578
>gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo
sapiens]
Length = 382
Score = 38.5 bits (88), Expect = 0.008
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 3 EAGAAEEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEK 62
E A EEA +E + D+ RL + M+IR+ L E+ + ++LK+ ++
Sbjct: 41 ETSAGEEA-----QGQEGPAAAQLDVLRLRSSSMEIREKGSEFLKEELHRAQKELKLKDE 95
Query: 63 NLERKEQELEQLKMDCEHFKARLETVQADNIREKKEK-LALRQQLNEAKQQL-LQQAE 118
ER + EQL+ + E A L +RE K A +QL EA+ ++ + QAE
Sbjct: 96 ECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQAE 153
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 38.1 bits (87), Expect = 0.011
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 60 VEKNLERKEQELEQLKMDCEHFKARLETVQA--DNIREKKEKLALRQQLNE----AKQQL 113
+ +N+ER E++QL + + + +A D+I + + L ++Q +E KQ+
Sbjct: 700 LRRNIERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRS 759
Query: 114 LQQAEYCTEMGAAACTLLWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQ 173
LQ E L + S+ E +KA LG D L S+ Q V +L+ +++
Sbjct: 760 LQSLE----------ASLHAMESTRESLKAELGTD-LLSQLSLEDQKR---VDALNDEIR 805
Query: 174 ELDSDESQFV---FALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLK 222
+L + Q + L GI+T V +L + R LD + Q L +L+
Sbjct: 806 QLQQENRQLLNERIKLEGIITRV------ETYLNENLRKRLDQVEQELNELR 851
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 37.7 bits (86), Expect = 0.014
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 1 MGEAGAAEEACRHMGTK-EEFVKVRKKDLER----LTTEVMQIRDFLPRILNGEVLESFQ 55
+ A EEA R + + +E +K +K E L E+ +++ + ++ E
Sbjct: 420 LSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIA 479
Query: 56 KL-KIVEKNLERKEQEL------------EQLKMDCEHFKARLETVQADNIREKKEKLAL 102
KL K+ EK L RKEQEL EQ+K+ E K++ E ++ +E++E LAL
Sbjct: 480 KLQKLHEKELARKEQELTKKLQTREREFQEQMKVALE--KSQSEYLKISQEKEQQESLAL 537
Query: 103 RQQLNEAKQQLLQQAE 118
++L K+ +L ++E
Sbjct: 538 -EELELQKKAILTESE 552
Score = 33.5 bits (75), Expect = 0.27
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 18 EEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVE------KNLERKEQEL 71
+E K++ + T + Q+RD I E LE + + I E + LE KE+E+
Sbjct: 328 QELEKIKDLHMAEKTKLITQLRDAKNLI---EQLEQDKGMVIAETKRQMHETLEMKEEEI 384
Query: 72 EQLKMDCEHFKARLETVQADNIREKKEK------------LALRQQLNEAKQQL 113
QL+ + + T Q + +RE+KEK L+ Q+ EA+++L
Sbjct: 385 AQLRS-----RIKQMTTQGEELREQKEKSERAAFEELEKALSTAQKTEEARRKL 433
Score = 30.8 bits (68), Expect = 1.8
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 24 RKKDLERLTT----EVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELEQLKMDCE 79
+K+ +E LT E+ + + LN + E Q++ ++ L+ KEQE+ +LK
Sbjct: 1025 QKEQIESLTEVHRRELNDVISIWEKKLNQQA-EELQEIHEIQ--LQEKEQEVAELKQKIL 1081
Query: 80 HFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEM 123
F E + + K+E + LNE ++QL Q++ + +
Sbjct: 1082 LFGCEKEEMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHVNSL 1125
Score = 30.0 bits (66), Expect = 3.0
Identities = 19/106 (17%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 17 KEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELEQLKM 76
KEE + + ++++TT+ ++R+ + +F++L+ ++ E+ +LK
Sbjct: 380 KEEEIAQLRSRIKQMTTQGEELREQKEKSERA----AFEELEKALSTAQKTEEARRKLKA 435
Query: 77 DCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTE 122
+ + +++T++ + ++E+++L+Q+L+ KQ+++ + +E
Sbjct: 436 EMDE---QIKTIEKTS---EEERISLQQELSRVKQEVVDVMKKSSE 475
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 19/111 (17%)
Query: 24 RKKDLERLTTEVMQIRDF--LPRILNGEVLESFQKLKIVEKNLERKEQELEQLKMDCEH- 80
++KD+E V +++ F L + V E+ +K+ +E + + ELE K + EH
Sbjct: 1553 QQKDIEHKEL-VQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHV 1611
Query: 81 -------------FKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
+ RLE+ A + E K K Q++ K+QLL Q E
Sbjct: 1612 NLSVKSKEEELKALEDRLESESAAKLAELKRK--AEQKIAAIKKQLLSQME 1660
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 37.4 bits (85), Expect = 0.019
Identities = 39/218 (17%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 13 HMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELE 72
H+ T + ++ ++++L ++TT++ Q+ ++ + + +E +L+ +++
Sbjct: 668 HLDTAQNALQDKQQELNKITTQLDQV--------TAKLQDKQEHCSQLESHLKEYKEKYL 719
Query: 73 QLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMGAAACTLLW 132
L+ E + +++ ++AD++ K K +A Q L QQ + T++ A L
Sbjct: 720 SLEQKTEELEGQIKKLEADSLEVKASK-------EQALQDLQQQRQLNTDLELRATELSK 772
Query: 133 GVSSSEEVVKA----ILGGDKALKFF--SITGQTMESFVKSLDGDV--QELDSDESQFVF 184
+ +E+V + + +AL+ +T Q E + D + QE +
Sbjct: 773 QLEMEKEIVSSTRLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQHEELNN 832
Query: 185 ALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLK 222
+ VT + + +E L+ + D + ++ LK
Sbjct: 833 RIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSDSLK 870
Score = 35.8 bits (81), Expect = 0.055
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 16 TKEEFVKVRKK------DLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQ 69
+K EF K +K DLE+ E L L ++ + ++ K ++K+LE++++
Sbjct: 872 SKSEFEKENQKGKAAILDLEKTCKE-------LKHQLQVQMENTLKEQKELKKSLEKEKE 924
Query: 70 ELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQ 116
QLK++ + +L Q + +KE+ L+ +NE KQ Q+
Sbjct: 925 ASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQK 971
Score = 30.4 bits (67), Expect = 2.3
Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 65 ERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMG 124
++ ++EL +++ +H KA + +Q +++ L L+ ++N+ +LL+ ++G
Sbjct: 375 QKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETER---QLG 431
Query: 125 AAACTL--LWGVSSSEEVVKAILGGDKALKFFSITGQTMESFVKSLDGDVQELDSDESQF 182
A L +SS + + K D LK + Q E S + +LD + Q
Sbjct: 432 EAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQ-HQLDKTKQQH 490
Query: 183 VFALAGIVTNVAAIACGREFLVNSSRVLLDTILQLLGDLKPGQCTKLKVLMLMSLYNVSI 242
A+ + ++ L+ +L+ +GD K + L+ L+ S N+S+
Sbjct: 491 --------QEQQALQQSTTAKLREAQNDLEQVLRQIGD-KDQKIQNLEALLQKSKENISL 541
Score = 28.5 bits (62), Expect = 8.8
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 8 EEACRHMGTKEEFVK----VRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKN 63
E+ R +G K++ ++ + +K E ++ + D +I GE E+ ++ EKN
Sbjct: 512 EQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEG-ETAVLNQLQEKN 570
Query: 64 LERKEQEL---EQLKMDCEHFKARLETVQADNIREKKEKLA---------------LRQQ 105
+EQ E+LK E K E + D ++E+K L L Q
Sbjct: 571 HTLQEQVTQLTEKLKNQSESHKQAQENLH-DQVQEQKAHLRAAQDRVLSLETSVNELNSQ 629
Query: 106 LNEAKQQLLQ 115
LNE+K+++ Q
Sbjct: 630 LNESKEKVSQ 639
>gi|50083279 centrosome protein 4 [Homo sapiens]
Length = 1140
Score = 37.4 bits (85), Expect = 0.019
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 8 EEACRHMGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERK 67
E+ H+ + +F++ KDLE+ E+M+ ++ + EV+ K + + + L
Sbjct: 267 EKLIAHLNIQVDFLQQANKDLEKRIRELMETKE----TVTSEVVNLSNKNEKLCQELTEI 322
Query: 68 EQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMGAAA 127
+Q +QL+ E + + +E K KL+ Q L E +L + C +
Sbjct: 323 DQLAQQLERHKEEVLETADKELGEAKKEIKRKLSEMQDLEETMAKLQLELNLCQKEKERL 382
Query: 128 CTLLWGVSSSEEVVKAILGG----DKALKFFSITGQ--TMESFVKSLDGDVQELDSDESQ 181
L S E VV + K ++ F++T + T+E L+ ++ D S+
Sbjct: 383 SDELLVKSDLETVVHQLEQEKQRLSKKVESFAVTERQLTLEVERMRLEHGIKRRDRSPSR 442
Query: 182 FVFALAGI 189
L GI
Sbjct: 443 LDTFLKGI 450
Score = 35.0 bits (79), Expect = 0.094
Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 14 MGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELEQ 73
M +++E V KK + + E +DFL ++ E +K+ +++NL KE+ + Q
Sbjct: 715 MTSQDEEAHVMKKTIGVIDKE----KDFLQETVD----EKTEKIANLQENLANKEKAVAQ 766
Query: 74 LKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+K+ ++ + ++ + +E +LR+QL+ A ++L
Sbjct: 767 MKIMISECESSVNQLKETLVNRDREINSLRRQLDAAHKEL 806
>gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]
Length = 728
Score = 37.0 bits (84), Expect = 0.025
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 25/136 (18%)
Query: 6 AAEEACRHMGTKEEFVKVRKKDLERLTTEVMQ-IRDFLPRI-----------------LN 47
AA +A R + + EF++V KK+ R TE + +R + R+ L
Sbjct: 579 AALQAKRSLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLK 638
Query: 48 GEVLESFQKLKIVEKNLE------RKEQELEQLKMDCEHFKARLETVQADNIREKKEKLA 101
E LE ++ ++ +K E + ++E L++ +H +A E ++AD +RE++ +
Sbjct: 639 RE-LEQARQARVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEADREQLRADLLREREAREH 697
Query: 102 LRQQLNEAKQQLLQQA 117
L + + E ++QL +A
Sbjct: 698 LEKVVKELQEQLWPRA 713
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 37.0 bits (84), Expect = 0.025
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 42 LPRILNGEVLESFQKLKIVEKNLERKEQEL-EQLKMDCEHFKARLET--------VQADN 92
LP ++ E+L+ + LK++ KNL +K EL +L D E++K E + D+
Sbjct: 394 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 453
Query: 93 IREKKEKLALRQQLNEAKQQLLQQAEYCTEM 123
KK LR + + +++ +YCT M
Sbjct: 454 QNRKKLSELLRYYTSASGDEMVSLKDYCTRM 484
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 37.0 bits (84), Expect = 0.025
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 42 LPRILNGEVLESFQKLKIVEKNLERKEQEL-EQLKMDCEHFKARLET--------VQADN 92
LP ++ E+L+ + LK++ KNL +K EL +L D E++K E + D+
Sbjct: 516 LPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDS 575
Query: 93 IREKKEKLALRQQLNEAKQQLLQQAEYCTEM 123
KK LR + + +++ +YCT M
Sbjct: 576 QNRKKLSELLRYYTSASGDEMVSLKDYCTRM 606
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 5 GAAEEACRHMGTKEE-FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQ-KLKIVEK 62
G + C H G K F K +K + L + R +L EV + Q KL+ V K
Sbjct: 91 GKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH-HTVLTEEVFKECQEKLQAVLK 149
Query: 63 NLERKEQELEQLKMDCEHFKARLE-TVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+++E+E E+L+ D K + VQ + R + E LR LN +Q+ LQ+ E
Sbjct: 150 RLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLE 206
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 5 GAAEEACRHMGTKEE-FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQ-KLKIVEK 62
G + C H G K F K +K + L + R +L EV + Q KL+ V K
Sbjct: 91 GKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH-HTVLTEEVFKECQEKLQAVLK 149
Query: 63 NLERKEQELEQLKMDCEHFKARLE-TVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+++E+E E+L+ D K + VQ + R + E LR LN +Q+ LQ+ E
Sbjct: 150 RLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLE 206
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 5 GAAEEACRHMGTKEE-FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQ-KLKIVEK 62
G + C H G K F K +K + L + R +L EV + Q KL+ V K
Sbjct: 91 GKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH-HTVLTEEVFKECQEKLQAVLK 149
Query: 63 NLERKEQELEQLKMDCEHFKARLE-TVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+++E+E E+L+ D K + VQ + R + E LR LN +Q+ LQ+ E
Sbjct: 150 RLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLE 206
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 5 GAAEEACRHMGTKEE-FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQ-KLKIVEK 62
G + C H G K F K +K + L + R +L EV + Q KL+ V K
Sbjct: 445 GKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH-HTVLTEEVFKECQEKLQAVLK 503
Query: 63 NLERKEQELEQLKMDCEHFKARLE-TVQADNIREKKEKLALRQQLNEAKQQLLQQAE 118
L+++E+E E+L+ D K + VQ + R + E LR LN +Q+ LQ+ E
Sbjct: 504 RLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLE 560
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 37.0 bits (84), Expect = 0.025
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 48 GEVLESFQKLKIVEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLN 107
G + + + L+ L+ KE+E ++L D +ARL+T + R+ EK AL QL+
Sbjct: 1246 GNLEKMCRSLEDQVSELKTKEEEQQRLINDLTAQRARLQTEAGEYSRQLDEKDALVSQLS 1305
Query: 108 EAKQQLLQQAE 118
+KQ QQ E
Sbjct: 1306 RSKQASTQQIE 1316
Score = 34.3 bits (77), Expect = 0.16
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 3 EAGAAEEACRHMGTKEE--FVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIV 60
EAG A A + K E F K+R+ DLE T + + + L + +S +L
Sbjct: 1155 EAGGATSAQVELNKKREAEFQKLRR-DLEEATLQ----HEAMVAALRKKHADSMAELGEQ 1209
Query: 61 EKNLERKEQELE----QLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQ 116
NL+R +Q+LE +LKM+ + + E + +K +L Q++E K + +Q
Sbjct: 1210 IDNLQRVKQKLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQVSELKTKEEEQ 1269
Query: 117 AEYCTEMGAAACTL 130
++ A L
Sbjct: 1270 QRLINDLTAQRARL 1283
Score = 28.9 bits (63), Expect = 6.7
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 3 EAGAAEEACRHMGTKEEFVK-VRKKDLERLTTEVMQIRDFLPRI--LNGEVLESFQKLKI 59
E A+++ R + T+ VK V ++ L++L T + ++ I L ++ E +++
Sbjct: 1469 ELEASQKESRSLSTELFKVKNVYEESLDQLETLRRENKNLQQEISDLTEQIAEGGKQIHE 1528
Query: 60 VEKNLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQL 113
+EK ++ EQE CE +A LE +A E+ + L ++ +LN+ K ++
Sbjct: 1529 LEKIKKQVEQE------KCE-IQAALEEAEASLEHEEGKILRIQLELNQVKSEV 1575
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 36.6 bits (83), Expect = 0.032
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 9 EACRHMGTKEEFVK---VRKKDLERLTTEVMQIRDFLPRILNGEVL---ESFQKLKIVEK 62
E + + KEE V+ KK+LE+ T + + E L E FQKL+ ++
Sbjct: 304 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKLE--KE 361
Query: 63 NLERKEQELEQLKMDCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQ 112
NLE E ++LK E ++ +Q + E+ + + L+QQ+NE K +
Sbjct: 362 NLE----ERQKLKSRLEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNE 407
Score = 32.0 bits (71), Expect = 0.79
Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 14 MGTKEEFVKVRKKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELEQ 73
+ +EEF K+ K++LE ++ L ++ N + + ++ K ++ + E + E
Sbjct: 349 LSLQEEFQKLEKENLEERQKLKSRLEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNEN 408
Query: 74 LKM-------DCEHFKARLETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTEMGAA 126
K+ + +++ + ET Q + E+ K + + LL C E
Sbjct: 409 AKLKQQVARSEEQNYVPKFETAQLKDQLEEVLKSDITKDTKTTHSNLLPDCSPCEERLNP 468
Query: 127 A---------------CTLLWGVSSSEEVVKAILGGDK-ALKFFSITGQTMESF---VKS 167
A L+ G+ + ++++ + K + K I Q ++S K+
Sbjct: 469 ADIKRASQLASKMHSLLALMVGLLTCQDIINSDAEHFKESEKVSDIMLQKLKSLHLKKKT 528
Query: 168 LDGDVQELDSDESQFV 183
LD +V + DSDE++ +
Sbjct: 529 LDKEVIDCDSDEAKSI 544
Score = 28.5 bits (62), Expect = 8.8
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 29 ERLTTEVMQIRDFLPRILNGEVL-----ESFQKLKIVEKNLERKEQE-LEQLKMDCEHFK 82
ER TE+ Q + + L + E ++L+ ++K LE+ L+ LK + E +
Sbjct: 286 ERYMTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQE 345
Query: 83 ARLETVQADNIREKKEKLALRQQLNEAKQQLLQQ 116
++Q + + +KE L RQ+L ++LL Q
Sbjct: 346 QEFLSLQEEFQKLEKENLEERQKLKSRLEKLLTQ 379
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 36.6 bits (83), Expect = 0.032
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 25 KKDLERLTTEVMQIRDFLPRILNGEVLESFQKLKIVEKNLERKEQELEQLKMDCEHFKAR 84
+ DLERL Q+ + ++ G VL +++ + K+LE+ E + ++ + +K
Sbjct: 965 RSDLERL-----QLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQE 1019
Query: 85 LETVQADNIREKKEKLALRQQLNEAKQQLLQQAEYCTE 122
E + N++E E L+Q+ +++QQA+ TE
Sbjct: 1020 TEQL-VSNLKE--ENTLLKQEKEALNHRIVQQAKEMTE 1054
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,771,040
Number of Sequences: 37866
Number of extensions: 432998
Number of successful extensions: 4161
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 2951
Number of HSP's gapped (non-prelim): 1441
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.