Guide to the Human Genome
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Name: HSF2BP Sequence: fasta or formatted (334aa) NCBI GI: 5901980
Description:

heat shock transcription factor 2 binding protein

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         24           3
 C cysteine            2.1          7           1
 D aspartate           4.2         14           1
 E glutamate          10.5         35           2
 F phenylalanine       3.9         13           2
 G glycine             4.8         16           2
 H histidine           1.2          4           1
 I isoleucine          3.9         13           1
 K lysine              7.5         25           2
 L leucine            15.3         51           2
 M methionine          2.7          9           1
 N asparagine          3.0         10           1
 P proline             2.4          8           1
 Q glutamine           6.0         20           2
 R arginine            5.1         17           1
 S serine              7.2         24           3
 T threonine           3.9         13           2
 V valine              7.5         25           2
 W tryptophan          0.9          3           2
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock transcription factor 2 binding protein [Ho... 
DST                   0.032   dystonin isoform 4 
DST                   0.032   dystonin isoform 3 
DST                   0.032   dystonin isoform 2 
DST                   0.032   dystonin isoform 1 
DST                   0.032   dystonin isoform 1eA precursor 
MYH4                  0.027   myosin, heavy polypeptide 4, skeletal muscle 
KIF20B                0.027   M-phase phosphoprotein 1 
FAM184B               0.026   hypothetical protein LOC27146 
MYH1                  0.024   myosin, heavy chain 1, skeletal muscle, adult [Homo...
PMFBP1                0.024   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.024   polyamine modulated factor 1 binding protein 1 isof...
MYH9                  0.023   myosin, heavy polypeptide 9, non-muscle 
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
RAB3IL1               0.023   RAB3A interacting protein (rabin3)-like 1 
SMC3                  0.021   structural maintenance of chromosomes 3 
GOLGA4                0.021   golgi autoantigen, golgin subfamily a, 4 
EEA1                  0.019   early endosome antigen 1, 162kD 
CEP135                0.019   centrosome protein 4 
SKI                   0.019   v-ski sarcoma viral oncogene homolog 
HSP90AA1              0.019   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.019   heat shock 90kDa protein 1, alpha isoform 1 
TRIM34                0.019   tripartite motif protein 34 isoform 3 
TRIM34                0.019   tripartite motif protein 34 isoform 1 
TRIM34                0.019   tripartite motif protein 34 isoform 1 
TRIM6-TRIM34          0.019   tripartite motif-containing 6 and tripartite motif-c...
MYH8                  0.019   myosin, heavy chain 8, skeletal muscle, perinatal [...
CAGE1                 0.019   cancer antigen 1 
MYO5A                 0.019   myosin VA isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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