Guide to the Human Genome
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Name: ESR2 Sequence: fasta or formatted (495aa) NCBI GI: 94538328
Description:

estrogen receptor beta isoform 2

Referenced in:

Organs and Hormones
Nuclear Receptors

Other entries for this name:
alt prot [530aa] estrogen receptor beta isoform 1
alt mRNA [495aa] estrogen receptor beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         35           1
 C cysteine            3.6         18           1
 D aspartate           3.6         18           1
 E glutamate           5.9         29           1
 F phenylalanine       2.2         11           2
 G glycine             5.1         25           2
 H histidine           3.8         19           2
 I isoleucine          3.6         18           1
 K lysine              5.3         26           2
 L leucine            11.5         57           3
 M methionine          4.0         20           3
 N asparagine          3.0         15           1
 P proline             5.9         29           2
 Q glutamine           3.6         18           3
 R arginine            6.5         32           2
 S serine             10.5         52           2
 T threonine           4.4         22           2
 V valine              5.9         29           2
 W tryptophan          1.4          7           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   estrogen receptor beta isoform 2 
ESR2                  1.000   estrogen receptor beta isoform 2 
ESR2                  0.950   estrogen receptor beta isoform 1 
ESR1                  0.391   estrogen receptor alpha isoform 4 
ESR1                  0.391   estrogen receptor alpha isoform 3 
ESR1                  0.391   estrogen receptor alpha isoform 2 
ESR1                  0.391   estrogen receptor alpha isoform 1 
ESRRB                 0.195   estrogen-related receptor beta 
ESRRG                 0.195   estrogen-related receptor gamma isoform 2 
ESRRG                 0.195   estrogen-related receptor gamma isoform 2 
ESRRG                 0.195   estrogen-related receptor gamma isoform 1 
ESRRG                 0.195   estrogen-related receptor gamma isoform 2 
ESRRA                 0.187   estrogen-related receptor alpha 
PGR                   0.146   progesterone receptor 
NR3C2                 0.139   nuclear receptor subfamily 3, group C, member 2 [Ho...
NR3C1                 0.138   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.137   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.137   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.137   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.137   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.137   nuclear receptor subfamily 3, group C, member 1 isofo...
AR                    0.135   androgen receptor isoform 2 
AR                    0.135   androgen receptor isoform 1 
NR3C1                 0.133   nuclear receptor subfamily 3, group C, member 1 isof...
RXRB                  0.129   retinoid X receptor, beta 
RXRG                  0.127   retinoid X receptor, gamma isoform a 
RXRA                  0.123   retinoid X receptor, alpha 
NR4A1                 0.122   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR4A1                 0.122   nuclear receptor subfamily 4, group A, member 1 [Hom...
NR2E1                 0.117   nuclear receptor subfamily 2, group E, member 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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