Search of human proteins with 58294158

Search of human proteins with 58294158

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58294158 breast carcinoma amplified sequence 4 isoform c
[Homo sapiens]
         (158 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58294158 breast carcinoma amplified sequence 4 isoform c [Hom...   321   2e-88
gi|60498980 breast carcinoma amplified sequence 4 isoform b [Hom...   299   6e-82
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom...   234   3e-62
gi|8922952 cappuccino [Homo sapiens]                                   65   2e-11
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             32   0.29 
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   0.66 
gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo ...    30   0.86 
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   1.5  
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   1.5  
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    29   1.5  
gi|4557719 DNA ligase I [Homo sapiens]                                 29   1.5  
gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens]           29   1.5  
gi|171460922 transmembrane protein 132D [Homo sapiens]                 29   1.5  
gi|14861860 testicular acid phosphatase precursor [Homo sapiens]       29   1.5  
gi|148612801 KIAA1009 protein [Homo sapiens]                           29   1.5  
gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]     29   1.9  
gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, pa...    29   1.9  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            29   1.9  
gi|239747350 PREDICTED: hypothetical protein XP_002346429 [Homo ...    28   3.3  
gi|239741175 PREDICTED: hypothetical protein XP_002342127 [Homo ...    28   3.3  
gi|158187521 A-kinase anchor protein 5 [Homo sapiens]                  28   4.3  
gi|29550928 sulfotransferase family, cytosolic, 1B, member 1 [Ho...    27   5.6  
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              27   5.6  
gi|94421471 ring finger protein 17 [Homo sapiens]                      27   5.6  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    27   7.3  
gi|4559408 colony stimulating factor 2 receptor, beta precursor ...    27   9.5  
gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens]                     27   9.5  
gi|54607053 GCN1 general control of amino-acid synthesis 1-like ...    27   9.5  
gi|23943886 Rhox homeobox family, member 1 [Homo sapiens]              27   9.5  
gi|18034690 hypothetical protein LOC25980 [Homo sapiens]               27   9.5  

>gi|58294158 breast carcinoma amplified sequence 4 isoform c [Homo
           sapiens]
          Length = 158

 Score =  321 bits (822), Expect = 2e-88
 Identities = 158/158 (100%), Positives = 158/158 (100%)

Query: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60
           MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE
Sbjct: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60

Query: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEKS 120
           AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEKS
Sbjct: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEKS 120

Query: 121 PAPVPVTYELPTLYRTEDYFPVDAGEAQHHPRTCPRPL 158
           PAPVPVTYELPTLYRTEDYFPVDAGEAQHHPRTCPRPL
Sbjct: 121 PAPVPVTYELPTLYRTEDYFPVDAGEAQHHPRTCPRPL 158


>gi|60498980 breast carcinoma amplified sequence 4 isoform b [Homo
           sapiens]
          Length = 203

 Score =  299 bits (766), Expect = 6e-82
 Identities = 158/203 (77%), Positives = 158/203 (77%), Gaps = 45/203 (22%)

Query: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60
           MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE
Sbjct: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60

Query: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE-- 118
           AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE  
Sbjct: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEAF 120

Query: 119 -------------------------------------------KSPAPVPVTYELPTLYR 135
                                                      KSPAPVPVTYELPTLYR
Sbjct: 121 VKMVGHHVAFLEADVLQAERDHGAFPQALRRWLGSAGLPSFRNKSPAPVPVTYELPTLYR 180

Query: 136 TEDYFPVDAGEAQHHPRTCPRPL 158
           TEDYFPVDAGEAQHHPRTCPRPL
Sbjct: 181 TEDYFPVDAGEAQHHPRTCPRPL 203


>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
           sapiens]
          Length = 211

 Score =  234 bits (596), Expect = 3e-62
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60
           MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE
Sbjct: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAE 60

Query: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE 118
           AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE
Sbjct: 61  AKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE 118


>gi|8922952 cappuccino [Homo sapiens]
          Length = 217

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 49/149 (32%)

Query: 42  MRSGARELALFLTPEPGA--EAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPV 99
           +R  A   A  L P  GA  E + ++ ++E +L R++EF  + D++R D+S ++ E +P 
Sbjct: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120

Query: 100 LKAKLTEMRGIYAKVDRLE----------------------------------------- 118
           + AK  EMR IY+++DRLE                                         
Sbjct: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180

Query: 119 -----KSPA-PVPVTYELPTLYRTEDYFP 141
                 +P+ P    YE P L+RTEDYFP
Sbjct: 181 SLFSKSAPSRPQQAGYEAPVLFRTEDYFP 209


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 11/62 (17%)

Query: 2   QRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEA 61
           QR GG   R G + G PGS   P            D+P       R+ A    P P A  
Sbjct: 312 QRNGGSGQRSGAHGGRPGSAHSP-----------PDKPSSPSPRVRDKAAAAAPTPPARG 360

Query: 62  KE 63
           KE
Sbjct: 361 KE 362


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 30.4 bits (67), Expect = 0.66
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 53   LTPEPGAEAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENI-PVLKAKLTEMRGIY 111
            L PE  A  +EV   +E  L+  EE     + I  +   I EE + PV+  K+ E   + 
Sbjct: 9903 LEPEEVAFEEEVVTHVEEYLVEEEE-----EYIHEEEEFITEEEVVPVIPVKVPE---VP 9954

Query: 112  AKVDRLEKSPAPVPVTYELP 131
             K    EK P PVP   E P
Sbjct: 9955 RKPVPEEKKPVPVPKKKEAP 9974


>gi|153945846 inositol 1,4,5-triphosphate receptor, type 3 [Homo
            sapiens]
          Length = 2671

 Score = 30.0 bits (66), Expect = 0.86
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 52   FLTPEPGAEAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIY 111
            FL P PG ++ E  + ++G+L RL + C + + +R    ++L +N+   K  L  ++  Y
Sbjct: 1157 FLHP-PGEKSSENYQIVKGILERLNKMCGVGEQMRKKQQRLL-KNMDAHKVMLDLLQIPY 1214

Query: 112  AKVD 115
             K D
Sbjct: 1215 DKGD 1218


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 118  EKSPAPVPVTYELPTLYRTEDYFPVDAGEAQ 148
            E++P P P  Y +PT   T +YF   A ++Q
Sbjct: 1208 EQTPPPRPEAYPIPTQTYTREYFTFPASKSQ 1238


>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 2 [Homo
            sapiens]
          Length = 1651

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 118  EKSPAPVPVTYELPTLYRTEDYFPVDAGEAQ 148
            E++P P P  Y +PT   T +YF   A ++Q
Sbjct: 1209 EQTPPPRPEAYPIPTQTYTREYFTFPASKSQ 1239


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 3 [Homo
            sapiens]
          Length = 1612

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 118  EKSPAPVPVTYELPTLYRTEDYFPVDAGEAQ 148
            E++P P P  Y +PT   T +YF   A ++Q
Sbjct: 1193 EQTPPPRPEAYPIPTQTYTREYFTFPASKSQ 1223


>gi|4557719 DNA ligase I [Homo sapiens]
          Length = 919

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 20  SLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEAKEVEETIEG 70
           S+ +P+      L  + +Q +P R   + L+ F TP   A  KEV+E   G
Sbjct: 199 SVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVKEEEPG 249


>gi|92859641 thymidine kinase 2, mitochondrial [Homo sapiens]
          Length = 307

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 10 RPGRNHG-LPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEAK 62
          RPG   G  PGS R+P    L ++  D+ + EP  SG+   A+ L P  G  A+
Sbjct: 2  RPGLFKGQAPGSRRRPT-AGLAVVRADSHKKEPRASGSARPAMLLWPLRGWAAR 54


>gi|171460922 transmembrane protein 132D [Homo sapiens]
          Length = 1099

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 96  NIPVLKAKLTEMRGIYAKVDRLEKSPAPVPVTYEL 130
           ++  L +K+TE RGI   + R    P  +PVTY +
Sbjct: 19  SLAALFSKVTEGRGILESIQRFSLLPTYLPVTYHI 53


>gi|14861860 testicular acid phosphatase precursor [Homo sapiens]
          Length = 426

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 23/67 (34%), Positives = 29/67 (43%)

Query: 16  GLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEAKEVEETIEGMLLRL 75
           G P +  +P PV  + +  D     PMRS  R   L       AE +E  E   G L RL
Sbjct: 130 GSPEARWRPIPVHTVPVAEDKLLRFPMRSCPRYHELLREATEAAEYQEALEGWTGFLSRL 189

Query: 76  EEFCSLA 82
           E F  L+
Sbjct: 190 ENFTGLS 196


>gi|148612801 KIAA1009 protein [Homo sapiens]
          Length = 1403

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 32  LLVDADQPEPMRSGARELALFLTPEPGAEAKEVEET----IEGMLLRLEEFCSLADLIRS 87
           L VD ++ +  R  A++   ++T E   E K +EET    I  +  RL+ +    +L+  
Sbjct: 815 LEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILEETHKQEISRLQKRLQWYAENQELLDK 874

Query: 88  DTSQILEENIPVLKAKL 104
           D  ++ E N  + K KL
Sbjct: 875 DALRLREANEEIEKLKL 891


>gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]
          Length = 3056

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 20  SLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPE-PGAEAKEVEETIEGMLLRLEEF 78
           S R  D    L++L+D+   EP +S    + L L  E PG E     E +  +L  L   
Sbjct: 917 SFRAADIRRKLLMLIDSSTLEPTKSLHLHMYLMLLKELPGEEYPLPMEDVLELLKPLSNV 976

Query: 79  CSLADLIRSDTSQILEENIPVLK 101
           CSL    +     IL   + V+K
Sbjct: 977 CSLYRRDQDVCKTILNHVLHVVK 999


>gi|169218268 PREDICTED: similar to Serine-protein kinase ATM,
           partial [Homo sapiens]
          Length = 2934

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 20  SLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPE-PGAEAKEVEETIEGMLLRLEEF 78
           S R  D    L++L+D+   EP +S    + L L  E PG E     E +  +L  L   
Sbjct: 795 SFRAADIRRKLLMLIDSSTLEPTKSLHLHMYLMLLKELPGEEYPLPMEDVLELLKPLSNV 854

Query: 79  CSLADLIRSDTSQILEENIPVLK 101
           CSL    +     IL   + V+K
Sbjct: 855 CSLYRRDQDVCKTILNHVLHVVK 877


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 59   AEAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGI----YAKV 114
            A A+E   +++   ++  E    A  I  D  + L+E +P L A L  +R +      +V
Sbjct: 2879 AIAEETRNSVQTEEIKANEKAKKAQAIADDAQKDLDEALPALDAALASLRNLNKNDVTEV 2938

Query: 115  DRLEKSPAPVPVTYE 129
              +++ P  V +  E
Sbjct: 2939 RAMQRPPPGVKLVIE 2953


>gi|239747350 PREDICTED: hypothetical protein XP_002346429 [Homo
           sapiens]
          Length = 438

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 6   GGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPM 42
           GG   PGR  G PG LR P P A     V+AD+  P+
Sbjct: 319 GGGFGPGRRKGSPGRLRGP-PGADEAEEVEADEQHPL 354


>gi|239741175 PREDICTED: hypothetical protein XP_002342127 [Homo
           sapiens]
          Length = 352

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 6   GGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPM 42
           GG   PGR  G PG LR P P A     V+AD+  P+
Sbjct: 233 GGGFGPGRRKGSPGRLRGP-PGADEAEEVEADEQHPL 268


>gi|158187521 A-kinase anchor protein 5 [Homo sapiens]
          Length = 427

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 36  ADQPEPMRSGARELALFLTPEPGAEAKEVEETIEGML---LRLEEFCSLADLIRSDTSQI 92
           +DQPEP R     L   +T    +E+ + ++ +EG +   +  E+    ADL +      
Sbjct: 69  SDQPEPTRGAWASLKRLVTRRKRSESSKQQKPLEGEMQPAINAED----ADLSKKKAKSR 124

Query: 93  LEENIPVLKAKLTEMRGIYAKVDRLEKSPAPVPVTYELPTL 133
           L+  IP +K      R  ++K+  +E S   + V  E   L
Sbjct: 125 LK--IPCIKFPRGPKRSNHSKI--IEDSDCSIKVQEEAEIL 161


>gi|29550928 sulfotransferase family, cytosolic, 1B, member 1 [Homo
           sapiens]
          Length = 296

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 93  LEENIPVLKAKLTEMRGIYAKVDRLEKSPAPVPVTYELPT 132
           + E +P+L+  L  +R   + +++LEK+P+P  V   LPT
Sbjct: 75  ITEKVPMLEMTLPGLRT--SGIEQLEKNPSPRIVKTHLPT 112


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 11  PGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEAKEVEET 67
           P R+ GL  S   P P  L +  +    PE +R         L+P P  E  E+E T
Sbjct: 440 PSRSPGLSPS--SPSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIEST 494


>gi|94421471 ring finger protein 17 [Homo sapiens]
          Length = 1623

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 11/85 (12%)

Query: 62  KEVEETIEGMLLRLEEF---CSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLE 118
           ++ E   EG+L  ++     CSL D++  ++++  EE   V   K+   + +  KV R E
Sbjct: 556 RKSEPYTEGLLKDIQPLAQPCSLKDIVPQNSNEGWEEEAKVEFLKMVNNKAVSMKVFREE 615

Query: 119 --------KSPAPVPVTYELPTLYR 135
                   + P P  ++ ++P   R
Sbjct: 616 DGVLIVDLQKPPPNKISSDMPVSLR 640


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 5/131 (3%)

Query: 29   LLMLLVDADQPEPMRSGARELALFLTPEPGAEAKEVEETIEGMLLRLEEFCSLADLIRSD 88
            LL+L++ A   E +     EL   L    G+     E  I+  +L+ +E C    L+ + 
Sbjct: 6164 LLVLVIRAASKEDLGLYECELVNRL----GSARASAELRIQSPMLQAQEQCHREQLVAAV 6219

Query: 89   TSQILEENIPVLKAKLTEMRGIYAKVDRLEKSPAPVPVTYELPTLYRTEDYFPV-DAGEA 147
                LE     + + L  + G  A          P P     P L  T    PV    EA
Sbjct: 6220 EDTTLERADQEVTSVLKRLLGPKAPGPSTGDLTGPGPCPRGAPALQETGSQPPVTGTSEA 6279

Query: 148  QHHPRTCPRPL 158
               P   P+PL
Sbjct: 6280 PAVPPRVPQPL 6290


>gi|4559408 colony stimulating factor 2 receptor, beta precursor
           [Homo sapiens]
          Length = 897

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 4   TGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEA 61
           +GGG   P     + G  ++  PVA+ M   D + P           L  TP  GA +
Sbjct: 670 SGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGASS 727


>gi|81230485 acyl-CoA thioesterase 1 [Homo sapiens]
          Length = 421

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 24  PDPVALLM-------LLVDADQPEPMRSGARELALFLTPEPG 58
           PDP  LL         L    + EP+R+G     LFL PEPG
Sbjct: 114 PDPGRLLCRVRHERYFLPPGVRREPVRAGRVRGTLFLPPEPG 155


>gi|54607053 GCN1 general control of amino-acid synthesis 1-like 1
            [Homo sapiens]
          Length = 2671

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 15/90 (16%)

Query: 62   KEVEETIEGMLLR-LEEFCS---------LADLIRSDTSQILEENIPVLK-----AKLTE 106
            +E+  T+ G+LL  L   C+         L DL+R    +IL E IP+L+      K  E
Sbjct: 1920 REILPTLFGLLLGFLASTCADKRTIAARTLGDLVRKLGEKILPEIIPILEEGLRSQKSDE 1979

Query: 107  MRGIYAKVDRLEKSPAPVPVTYELPTLYRT 136
             +G+   +  + KS +   V Y   +L  T
Sbjct: 1980 RQGVCIGLSEIMKSTSRDAVLYFSESLVPT 2009


>gi|23943886 Rhox homeobox family, member 1 [Homo sapiens]
          Length = 184

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 15/47 (31%), Positives = 19/47 (40%)

Query: 1   MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGAR 47
           M R GG  P  G  +  P    QP P       ++  QPE M+   R
Sbjct: 60  MNRDGGMIPEGGGGNQEPRQQPQPPPEEPAQAAMEGPQPENMQPRTR 106


>gi|18034690 hypothetical protein LOC25980 [Homo sapiens]
          Length = 384

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 40  EPMRSGARELALFLTPEPGAEAKE--------VEETIEGMLLRLEEFCSLADLI----RS 87
           E MR+  +EL  FL P P A  K+         E T+E +     + C+ +D++      
Sbjct: 109 EAMRANLQELDQFLGPYPYATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMK 168

Query: 88  DTSQILEENIPVLKAKLTEMRGIYAKVDRLEKSPAPVPVTYELPTLYRTEDYFPVD 143
            T   + +N+P    +    +   A++  ++          ELPT    E   P +
Sbjct: 169 HTKDRVGQNLPRCGIECKSYQEGLARLPEMKPRAGTEIRFSELPTQMFPEGATPAE 224


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,615,863
Number of Sequences: 37866
Number of extensions: 405130
Number of successful extensions: 1193
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1173
Number of HSP's gapped (non-prelim): 37
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.