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Search of human proteins with 58218966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 426 e-120
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 53 2e-07
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 50 9e-07
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 50 9e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 2e-06
gi|50428940 mediator complex subunit 25 [Homo sapiens] 49 3e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 3e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 3e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 3e-06
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 48 6e-06
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 47 8e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 8e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 8e-06
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 46 2e-05
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 46 2e-05
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 46 2e-05
gi|154146199 sal-like 3 [Homo sapiens] 46 2e-05
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 45 4e-05
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 45 4e-05
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 45 4e-05
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 45 4e-05
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 45 4e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 45 4e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 4e-05
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 45 5e-05
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 44 9e-05
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 44 9e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 44 9e-05
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 426 bits (1096), Expect = e-120
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MSGPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAA 60
MSGPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAA
Sbjct: 1 MSGPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAA 60
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP
Sbjct: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
Query: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAATWRTWGQESKVL 180
GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAATWRTWGQESKVL
Sbjct: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAATWRTWGQESKVL 180
Query: 181 RKILKAWDPFSLL 193
RKILKAWDPFSLL
Sbjct: 181 RKILKAWDPFSLL 193
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 52.8 bits (125), Expect = 2e-07
Identities = 56/162 (34%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Query: 1 MSGPPSAPQGALAAPRSPAVRRKGLQAP-SWGSPGRPAAHSPWACGPPHWGPQ----RGP 55
+ G + P+G L RS GLQ P S +PG P P+ G P G + R P
Sbjct: 211 LPGGLAGPRGGLNTSRS---LYSGLQNPCSTATPGPPLGSFPFLPGGPPVGAEAWARRVP 267
Query: 56 RNAAAARPGPRSRWHKRCAAACGACARPPGHQ---LQPPGAGAPQPGVACSYLGPRPQRT 112
+ AA R P+S A++ A RPPG L+P PG S G P
Sbjct: 268 QPAAPPRRPPQS------ASSLSASLRPPGAPATFLRPSPIPCSSPGPWQSLCGLGP--- 318
Query: 113 PCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGS 154
PC+ P AGP RR GT P +PG A RA P S
Sbjct: 319 PCAGCPWP--TAGPGRRSPGGTSPERSPGTA---RARGDPTS 355
Score = 28.5 bits (62), Expect = 3.7
Identities = 50/172 (29%), Positives = 61/172 (35%), Gaps = 25/172 (14%)
Query: 5 PSAPQGALAAPR-SPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARP 63
P GAL P P+ + L A S SP RPAA G H P P + + P
Sbjct: 140 PDVVYGALPPPGCDPSGLGEALPAQSRPSPFRPAAPKAGPPGLVH--PLFSPSHLTSKTP 197
Query: 64 GPRSR-WHKRCAAACGACARPPG---------HQLQPPGAGAPQPGVACSYLGPRPQRTP 113
P R + G A P G LQ P + A PG P P
Sbjct: 198 PPLYLPTEGRRSDLPGGLAGPRGGLNTSRSLYSGLQNPCSTAT-PGPPLGSFPFLPGGPP 256
Query: 114 CSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLL 165
A++ W RR P AP R PP A + S PG+P+ L
Sbjct: 257 VGAEA---WA---RRVPQPA-----APPRRPPQSASSLSASLRPPGAPATFL 297
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 50.4 bits (119), Expect = 9e-07
Identities = 59/173 (34%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
Query: 2 SGPPSAP--QGALAAPRSP----AVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGP 55
+GPP A +GA AP + A G PS G PG A P G P +RG
Sbjct: 379 TGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS-GPPGSVGA--PGLRGTPGKDGERGE 435
Query: 56 RNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP-QPGVACSYLGPRPQRTPC 114
+ AA P + A G PG PPG G +PG+ S P P T
Sbjct: 436 KGAAGEEGSPGPVGPRGDPGAPGL----PG----PPGKGKDGEPGLRGSPGLPGPLGTK- 486
Query: 115 SAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPA 167
+ PG P R PG PG + PP SPGSR LPG P PA
Sbjct: 487 GDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPA 539
Score = 37.7 bits (86), Expect = 0.006
Identities = 43/155 (27%), Positives = 53/155 (34%), Gaps = 17/155 (10%)
Query: 10 GALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWA----CGPPHWGPQRGPRNAAAARPGP 65
G AP P VR + G G P GP GP P + P P
Sbjct: 286 GLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPA--GPPGLPGTTSLFTPHP 343
Query: 66 RSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAG 125
R + P G + P G P LGP+ P A+ + G
Sbjct: 344 RMPGEQG----------PKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGA 393
Query: 126 PRRRHAPGTEPHV-APGRAPPPRAGASPGSRLLPG 159
P PG HV APG + PP + +PG R PG
Sbjct: 394 PGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPG 428
Score = 36.2 bits (82), Expect = 0.018
Identities = 51/178 (28%), Positives = 60/178 (33%), Gaps = 35/178 (19%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPA-AHSPWACGPPHWGPQRGP-----R 56
GPP PQG P P K + G PG P A P GP RGP
Sbjct: 672 GPPG-PQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPE---GARGPPGFKGH 727
Query: 57 NAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSA 116
+ PGPR + A G PG + P G P GP+ R P
Sbjct: 728 TGDSGAPGPRGE-----SGAMGL----PGQEGLPGKDGDTGP---TGPQGPQGPRGPPGK 775
Query: 117 QSRPGWCAGPRRRHAPGTE----PHVAPG-------RAPPPRAGAS--PGSRLLPGSP 161
PG P PG + + +PG R PP G PG +PG P
Sbjct: 776 NGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP 833
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 50.4 bits (119), Expect = 9e-07
Identities = 54/184 (29%), Positives = 70/184 (38%), Gaps = 25/184 (13%)
Query: 5 PSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAA--- 61
PS P+G A+ R ++ AP R A ++ P G GP ++A
Sbjct: 151 PSEPRGIYASERPKSLGDASPSAPEVVG-ARAAVPRSFSAPYPTAGGSAGPEACSSAERR 209
Query: 62 -RPGP---RSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQ 117
R GP S H + C RPP GAG P G + L R +R +
Sbjct: 210 ARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPR 269
Query: 118 SRPGWC-AGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSL-------LLPAAT 169
+ PG GPRR+++ R PP A SPGS PSL PAA
Sbjct: 270 TSPGGADGGPRRQNSV---------RQRPPDASPSPGSARPAREPSLERVGGHPTSPAAL 320
Query: 170 WRTW 173
R W
Sbjct: 321 SRAW 324
Score = 34.7 bits (78), Expect = 0.052
Identities = 56/222 (25%), Positives = 69/222 (31%), Gaps = 66/222 (29%)
Query: 4 PPSAPQGALAAP-RSPAVRRKG-----------LQAPSWGSPGRPAAHSPWACGPPHWGP 51
P ++P A P R P++ R G A SW S P +P A P P
Sbjct: 290 PDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSP 349
Query: 52 QRG------------------PRNAAAARPGPRSRWHK----------RCAAACGACARP 83
G P AA +P P +R R A G A
Sbjct: 350 AEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEA 409
Query: 84 PGHQLQPPGAGAPQPGVACSYLG----------------------PRPQRTPCSAQSRPG 121
G + P A + S LG PRP+R P A +
Sbjct: 410 SGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGP--APTLAA 467
Query: 122 WCAGPRRRHAPGTEPHVAPGRAPPPRAGAS--PGSRLLPGSP 161
AG RR E A GR PRA A+ PG P +P
Sbjct: 468 QAAGSCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAP 509
Score = 28.5 bits (62), Expect = 3.7
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 2 SGPPSAPQGALAAPRSPAVRR---KGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNA 58
SGPP P PR P RR L A + GS R + + G + PR
Sbjct: 439 SGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAAD---GRRVRPRAP 495
Query: 59 AAARPGP---RSRWHKRCAAAC-GACARPPGHQLQPPGAGAPQPGVACSY 104
AA PGP S +R C G+ + +L P G P GV Y
Sbjct: 496 AARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGPAGGVGGGY 545
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 49.7 bits (117), Expect = 2e-06
Identities = 55/180 (30%), Positives = 70/180 (38%), Gaps = 43/180 (23%)
Query: 5 PSAPQGALA------APRSPAVR----RKGLQAPS-WGSPGRPAAHSPWACGPPHWGPQR 53
P +P+G LA AP +PA + GL PS G+P PAA P G P P +
Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPK 1261
Query: 54 GPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTP 113
G AA P G PP GAP P V P P+ P
Sbjct: 1262 GAPTPPAATPPSLK-----------------GGLATPPHKGAPNPAVVTP---PSPKGGP 1301
Query: 114 CSAQSR----PGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAAT 169
++ + P P + +PGT P P AP P A P + G+P+ LPA T
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPP---PKGAPTPPAVTPPSPK---GTPT--LPATT 1353
Score = 43.5 bits (101), Expect = 1e-04
Identities = 57/191 (29%), Positives = 71/191 (37%), Gaps = 37/191 (19%)
Query: 5 PSAPQGALA------APRSPAVR----RKGLQAPS-WGSPGRPAAHSPWACG----PPHW 49
P +P+G LA AP +PA + GL P G+P PAA P G PP
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP-- 1167
Query: 50 GPQRGPRNAAAARPGPRS--RWHKRCAAACGACARPP---GHQLQPPGAGAP------QP 98
P+ P AA P P+ A A PP G P GAP P
Sbjct: 1168 -PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 99 GVACSYLGPRPQRTPCSAQSRP----GWCAGPRRRHAP----GTEPHVAPGRAPPPRAGA 150
P P+ P + + P G A P + AP T P + G A PP GA
Sbjct: 1227 SPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGA 1286
Query: 151 SPGSRLLPGSP 161
+ + P SP
Sbjct: 1287 PNPAVVTPPSP 1297
Score = 42.7 bits (99), Expect = 2e-04
Identities = 52/179 (29%), Positives = 62/179 (34%), Gaps = 34/179 (18%)
Query: 5 PSAPQGALAAPRSPAVRRKGLQAPSWGSP----GRPAAHSPWACGPPHWGPQRGPRNAAA 60
P +P+G A P SP KG P +P G PA SP P P+ + A
Sbjct: 970 PPSPKGGPATP-SP----KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQP------------PGAGAPQP--GVACSYLG 106
A P P+ A+ A PP + P P A P P G A L
Sbjct: 1025 ATPFPKG-------ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLK 1077
Query: 107 PRPQRTPCSAQSRPGWCAGPRRRHAP----GTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
P + S G A P + AP T P G A PP GA P SP
Sbjct: 1078 GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP 1136
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/160 (27%), Positives = 53/160 (33%), Gaps = 30/160 (18%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQA--PSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAA 61
PP P+GA P + KG A P G+P P G P P +G AA
Sbjct: 1258 PP--PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Query: 62 RPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
P P G PP GAP P P P+ TP + P
Sbjct: 1316 TP-----------------PSPKGSPGTPPPKGAPTPPAVTP---PSPKGTPTLPATTPS 1355
Query: 122 WCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
GP P ++ P A P G G + P SP
Sbjct: 1356 SKGGPT---TPSSKEGPTPPAATPSHKG---GPAMTPPSP 1389
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/177 (31%), Positives = 66/177 (37%), Gaps = 23/177 (12%)
Query: 1 MSGPP--SAPQGALAAPRSPAVRRKGLQA--PSWGSPGRPAAHSPWACGPPHWGPQRG-P 55
++ PP AP A+ P SP KG A P G+P PAA P G P P +G P
Sbjct: 1278 LATPPHKGAPNPAVVTPPSP----KGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAP 1333
Query: 56 RNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCS 115
A P P K G P P P A P TP S
Sbjct: 1334 TPPAVTPPSP-----KGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Query: 116 AQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPS---LLLPAAT 169
+ P A P + P T P V P P +A A+P +R +PS L PA T
Sbjct: 1389 PKRGP---AIPSPKGDP-TSPAVIP--LSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Score = 37.4 bits (85), Expect = 0.008
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC-GPPHWGPQRGPRNAAAAR 62
P AP + P SP KG+ P +P + P+ GP P++ P + +
Sbjct: 861 PKGAPTPSAVTPLSP----KGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSS 916
Query: 63 PGPRSRWHKRCAAACGACARP-PGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQ--SR 119
++R A G A P P PP A P P + P+ TP +A S
Sbjct: 917 SPKKAR---ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 120 PGWCAGPRRRHAPGTEPHVAPGRAPPPRAG-ASPGSRLLPGSPSLLLPA 167
G A P + AP T P P P P+ G A+P + P P++ P+
Sbjct: 974 KGGPATPSPKGAP-TPPAATP---PSPKGGPATPSPKGAPTPPAVTPPS 1018
Score = 33.1 bits (74), Expect = 0.15
Identities = 52/194 (26%), Positives = 65/194 (33%), Gaps = 36/194 (18%)
Query: 2 SGPPSAPQGALAAPRSPA--VRRKGLQAPSWGSPGRPAAHSPWAC-----GPPHWGPQRG 54
+ PP P +P SPA + G P S G PA P A P P+
Sbjct: 1638 TSPPVTPSSLKDSPTSPASVTCKMGATVPQ-ASKGLPAKKGPTALKEVLVAP---APEST 1693
Query: 55 PRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQ--PPGAGAPQP-------------G 99
P A R GP+++ K A + C P P AP P G
Sbjct: 1694 PIITAPTRKGPQTK--KSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKG 1751
Query: 100 VACSYLGPRPQRTPCSAQSRPGWCAG-----PRRRHAP---GTEPHVAPGRAPPPRAGAS 151
S+ P P S S P A P+ A P V+ AP P
Sbjct: 1752 KDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLP 1811
Query: 152 PGSRLLPGSPSLLL 165
P + LP SP L+L
Sbjct: 1812 PKQQFLPSSPGLVL 1825
Score = 30.4 bits (67), Expect = 0.98
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Query: 86 HQLQPPGA-GAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAP 144
H PP GAP P A + L P+ P P P + P T AP +AP
Sbjct: 854 HSPTPPSPKGAPTPS-AVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP---APKQAP 909
Query: 145 --------PPRAGASPGSRLLPGSPS 162
P +A A+P + +P SPS
Sbjct: 910 ALSMTSSSPKKARATPAPKGIPASPS 935
Score = 30.4 bits (67), Expect = 0.98
Identities = 39/133 (29%), Positives = 50/133 (37%), Gaps = 23/133 (17%)
Query: 34 GRPAAHSPWACGPPHWGPQRGPRNAAAAR---PGPRSRWHKRCAAACGACARPPGHQLQP 90
G+ A+HSP P P AAA P P S A+ A PP +
Sbjct: 1751 GKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPES-------ASVSAAPSPP---VSL 1800
Query: 91 PGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCA-GPRRRHAPGTEPHVAPGRAPPPRAG 149
P A +P P L P+ Q P S PG P + AP E + P P P +G
Sbjct: 1801 PLAPSPVPT-----LPPKQQFLPSS----PGLVLESPSKPLAPADEDELLPLIPPEPISG 1851
Query: 150 ASPGSRLLPGSPS 162
P +L P+
Sbjct: 1852 GVPFQSVLVNMPT 1864
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 48.5 bits (114), Expect = 3e-06
Identities = 54/157 (34%), Positives = 60/157 (38%), Gaps = 17/157 (10%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARP 63
P PQG + A S A + Q + PG P A GPP GP P+N A P
Sbjct: 588 PQPQPQGTVGA--SGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQN-PGANP 644
Query: 64 GPRSRWHKRCAAACGACARPPG----HQLQPPGAGA----PQPGVACSYLGPRPQRTPCS 115
RS G PP H LQPPGA A P G+ LGP P P
Sbjct: 645 QLRSLLLNPPPPQTGV---PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGP-PLLHPPP 700
Query: 116 AQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
AQS P P R PG R P P+ G P
Sbjct: 701 AQSWPAQL--PPRAPLPGQMLLSGGPRGPVPQPGLQP 735
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.5 bits (114), Expect = 3e-06
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 4 PPSAPQG---ALAAPRSPAVRRKGLQAPSWGSPG--RPAAHSPWACGPPHW--GP----- 51
PP+ G + P P + GL P PG +P P PP GP
Sbjct: 314 PPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPA 373
Query: 52 -QRGPRNAAAARPGPRSRWHK----RCAAACGACARPPGHQLQPPGAGAPQPGVACSYLG 106
Q G ++ +PGP++ + A A+PP Q+ P A QPG+
Sbjct: 374 QQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKA 433
Query: 107 PRPQRTPCSAQSR---PGWCAGPRRRHAPGTEPHVAPGRAPPP 146
P P +TP P AGP + A T P P + P P
Sbjct: 434 PGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Score = 36.6 bits (83), Expect = 0.014
Identities = 36/123 (29%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 28 PSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQ 87
PS SP +P P PP P A+P + + A +PP
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP--- 352
Query: 88 LQPPGAGAPQPGVACSYLGPRPQRT----PCSAQSRPGWCAGPRRRHAPGTEPHVAPGRA 143
+QPPG P P P Q+T P S Q P A P G P PG A
Sbjct: 353 VQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP---PGVGKTPAQQPGPA 408
Query: 144 PPP 146
PP
Sbjct: 409 KPP 411
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 45/163 (27%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 4 PPSAPQG---ALAAPRSPAVRRKGLQAPSWGSPG--RPAAHSPWACGPPHW--GP----- 51
PP+ G + P P + GL P PG +P P PP GP
Sbjct: 314 PPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPA 373
Query: 52 -QRGPRNAAAARPGPRSRWHK----RCAAACGACARPPGHQLQPPGAGAPQPGVACSYLG 106
Q G ++ +PGP++ + A A+PP Q+ P A QPG+
Sbjct: 374 QQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKA 433
Query: 107 PRPQRTPCSAQSR---PGWCAGPRRRHAPGTEPHVAPGRAPPP 146
P P +TP P AGP + A T P P + P P
Sbjct: 434 PGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Score = 36.6 bits (83), Expect = 0.014
Identities = 36/123 (29%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 28 PSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQ 87
PS SP +P P PP P A+P + + A +PP
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP--- 352
Query: 88 LQPPGAGAPQPGVACSYLGPRPQRT----PCSAQSRPGWCAGPRRRHAPGTEPHVAPGRA 143
+QPPG P P P Q+T P S Q P A P G P PG A
Sbjct: 353 VQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP---PGVGKTPAQQPGPA 408
Query: 144 PPP 146
PP
Sbjct: 409 KPP 411
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 48.5 bits (114), Expect = 3e-06
Identities = 46/166 (27%), Positives = 55/166 (33%), Gaps = 20/166 (12%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARP 63
PP Q P+ P + Q P P P H PP PQ + A P
Sbjct: 63 PPPHQQQQQPPPQQPPPQ----QPPPHQPPPHPQPHQQQQPPPP---PQDSSKPVVAQGP 115
Query: 64 GPRSRWHKRCAAACGACARPPGHQLQPPGAG-----APQPGVACSYLGPRPQRTPCSAQS 118
GP A+ A P PPG+G P P V + G P P S
Sbjct: 116 GPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSS--- 172
Query: 119 RPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPG---SRLLPGSP 161
G P + P P PG P P+ G PG +PG P
Sbjct: 173 --GVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
Score = 30.0 bits (66), Expect = 1.3
Identities = 42/154 (27%), Positives = 50/154 (32%), Gaps = 45/154 (29%)
Query: 2 SGPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAA 61
S PP AP P +P P G P P A P GP GP+
Sbjct: 159 SAPPGAP------PPTPPSSGVPTTPPQAGGPPPPPAAVP--------GPGPGPKQG--- 201
Query: 62 RPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
PGP P G ++ PG P G S G P + P P
Sbjct: 202 -PGP---------------GGPKGGKM--PGGPKPGGGPGLSTPGGHP-KPPHRGGGEP- 241
Query: 122 WCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSR 155
G R+ H P + H + PPP PG R
Sbjct: 242 --RGGRQHHPPYHQQH---HQGPPP---GGPGGR 267
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 47.8 bits (112), Expect = 6e-06
Identities = 42/143 (29%), Positives = 55/143 (38%), Gaps = 20/143 (13%)
Query: 22 RKGLQAPSWGSPGRPAAHSPWACGP-------PHWGPQRGPRNAAAARPGPRSRWHKRCA 74
R+ + A G RP A PW P WG R R+AA A P +
Sbjct: 122 RRAVTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESRSAALASP-------RVSN 174
Query: 75 AACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRR-RHAPG 133
A +R PG + Q +G G + P P+ PC RP C+G R R A G
Sbjct: 175 APTTPASRNPGLRAQERQSGRRAAGGGGARAEP-PRVPPC----RPAGCSGGNRSRRAAG 229
Query: 134 TEPHVAPGRAPPPRAGASPGSRL 156
P + PP G +P + L
Sbjct: 230 AGPRTTRRKPPPRPPGTAPAAGL 252
Score = 32.7 bits (73), Expect = 0.20
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 14 APRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQR------GPRNAAAARPGPRS 67
AP +PA R GL+A S R A PP P R G R+ AA GPR+
Sbjct: 175 APTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRT 234
Query: 68 RWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTP 113
K PP +PPG AP G+ +L P + P
Sbjct: 235 TRRK----------PPP----RPPGT-APAAGLRSVHLLRIPYKEP 265
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 47.4 bits (111), Expect = 8e-06
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 54 GPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQ-----PGVACSYLGPR 108
G A RP +R AA AR G + AG+ PG A ++ GP
Sbjct: 1334 GQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAFAGPG 1393
Query: 109 PQRTPC-SAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGS---PSLL 164
+ A+ R G AGPR PG P PG AP +A +PG +PGS PS+L
Sbjct: 1394 GGGSGALEAEGRAGARAGPR----PGPRP---PGGAPARKAAVAPGPWKVPGSDKLPSVL 1446
Query: 165 LPAAT 169
P A+
Sbjct: 1447 KPGAS 1451
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 47.4 bits (111), Expect = 8e-06
Identities = 52/173 (30%), Positives = 68/173 (39%), Gaps = 30/173 (17%)
Query: 1 MSGPPSAPQGALAAPRSPAVRRKGLQA-PSWGSPGRPAAHSPWACGPP--HWGPQRGPRN 57
+ P SAPQ A+ +P + +G Q+ P G PG P A P A P GP + R
Sbjct: 508 LPSPTSAPQQP-ASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQ 566
Query: 58 AAAARPGPRSRWHKRCAAACGACARPPGHQ------LQPPGAGAPQPGVACSYLGPRPQR 111
+ + P P A PPG Q +PPG P S GP P+
Sbjct: 567 TSVSGPAPPK-----------ASGAPPGGQQRQGPPQKPPGPAGPTR--QASQAGPVPRT 613
Query: 112 -TPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSL 163
P + Q RP +GP P + P + PP A A+ G P P L
Sbjct: 614 GPPTTQQPRP---SGPGPAGRPKPQLAQKPSQDVPPPATAAAGG---PPHPQL 660
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 81 ARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTP-------CSAQSRPGWCAGPRRRHAPG 133
A PP Q PP G PQPG GP Q+ P S P P+R +P
Sbjct: 453 AGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPT 512
Query: 134 TEPHVAPGRAPPPRAGASPGSRLL---PGSPSLLLPAAT 169
+ P +A PP G SR + PG+P P A+
Sbjct: 513 SAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPAS 551
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 47.4 bits (111), Expect = 8e-06
Identities = 52/173 (30%), Positives = 68/173 (39%), Gaps = 30/173 (17%)
Query: 1 MSGPPSAPQGALAAPRSPAVRRKGLQA-PSWGSPGRPAAHSPWACGPP--HWGPQRGPRN 57
+ P SAPQ A+ +P + +G Q+ P G PG P A P A P GP + R
Sbjct: 508 LPSPTSAPQQP-ASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQ 566
Query: 58 AAAARPGPRSRWHKRCAAACGACARPPGHQ------LQPPGAGAPQPGVACSYLGPRPQR 111
+ + P P A PPG Q +PPG P S GP P+
Sbjct: 567 TSVSGPAPPK-----------ASGAPPGGQQRQGPPQKPPGPAGPTR--QASQAGPVPRT 613
Query: 112 -TPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSL 163
P + Q RP +GP P + P + PP A A+ G P P L
Sbjct: 614 GPPTTQQPRP---SGPGPAGRPKPQLAQKPSQDVPPPATAAAGG---PPHPQL 660
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 81 ARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTP-------CSAQSRPGWCAGPRRRHAPG 133
A PP Q PP G PQPG GP Q+ P S P P+R +P
Sbjct: 453 AGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPT 512
Query: 134 TEPHVAPGRAPPPRAGASPGSRLL---PGSPSLLLPAAT 169
+ P +A PP G SR + PG+P P A+
Sbjct: 513 SAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPAS 551
Score = 41.2 bits (95), Expect = 6e-04
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 2 SGPPSAP-QGALAAPRSPAVRRKGLQAPSWGSPGR-PAAHSPWACGPPHWGPQRGPRNAA 59
+GPP A Q +++ P P K AP G + P P GP Q GP
Sbjct: 558 AGPPQATRQTSVSGPAPP----KASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP---- 609
Query: 60 AARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSR 119
R GP + R + G RP Q P P P A + P PQ AQ++
Sbjct: 610 VPRTGPPTTQQPRPSGP-GPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668
Query: 120 P 120
P
Sbjct: 669 P 669
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 46.6 bits (109), Expect = 1e-05
Identities = 43/136 (31%), Positives = 46/136 (33%), Gaps = 21/136 (15%)
Query: 15 PRSPAVR-RKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARPGPRSRWHKRC 73
P PA R G SP PW P G QR AAAARP + W +R
Sbjct: 57 PPPPAARTHPGSCRARCPSPAAGGLRGPWTAAP---GRQRADEGAAAARPERQRVWARRL 113
Query: 74 AAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPG 133
P A AP PG L P P P + P AG AP
Sbjct: 114 ----------------PGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAP- 156
Query: 134 TEPHVAPGRAPPPRAG 149
P AP P PR G
Sbjct: 157 PSPAPAPRSRPAPRPG 172
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 45.8 bits (107), Expect = 2e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 66 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 125
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
A G A +C G PP A G + P + SA++R
Sbjct: 126 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 172
Query: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
+GP RR P P APG A A +P
Sbjct: 173 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 204
Score = 35.0 bits (79), Expect = 0.040
Identities = 47/162 (29%), Positives = 55/162 (33%), Gaps = 36/162 (22%)
Query: 36 PAAHS-PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGH 86
PA S PW+ P +RG A A P PR R RC A G R G+
Sbjct: 5 PAVGSYPWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN 63
Query: 87 QLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------E 135
A P +A P S +S P PR R PG +
Sbjct: 64 --------AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQ 111
Query: 136 PHVAPGRAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
P P R P P A A G+ G + P A WR WG
Sbjct: 112 PLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 153
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 45.8 bits (107), Expect = 2e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 119
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
A G A +C G PP A G + P + SA++R
Sbjct: 120 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 166
Query: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
+GP RR P P APG A A +P
Sbjct: 167 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 198
Score = 34.7 bits (78), Expect = 0.052
Identities = 44/156 (28%), Positives = 52/156 (33%), Gaps = 35/156 (22%)
Query: 41 PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGHQLQPPG 92
PW+ P +RG A A P PR R RC A G R G+
Sbjct: 5 PWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN------ 57
Query: 93 AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------EPHVAPG 141
A P +A P S +S P PR R PG +P P
Sbjct: 58 --AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQPLSPPL 111
Query: 142 RAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
R P P A A G+ G + P A WR WG
Sbjct: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 147
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 45.8 bits (107), Expect = 2e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 119
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
A G A +C G PP A G + P + SA++R
Sbjct: 120 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 166
Query: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
+GP RR P P APG A A +P
Sbjct: 167 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 198
Score = 34.7 bits (78), Expect = 0.052
Identities = 44/156 (28%), Positives = 52/156 (33%), Gaps = 35/156 (22%)
Query: 41 PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGHQLQPPG 92
PW+ P +RG A A P PR R RC A G R G+
Sbjct: 5 PWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN------ 57
Query: 93 AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------EPHVAPG 141
A P +A P S +S P PR R PG +P P
Sbjct: 58 --AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQPLSPPL 111
Query: 142 RAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
R P P A A G+ G + P A WR WG
Sbjct: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 147
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 45.8 bits (107), Expect = 2e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 73 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 132
Query: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
A G A +C G PP A G + P + SA++R
Sbjct: 133 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 179
Query: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
+GP RR P P APG A A +P
Sbjct: 180 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 211
Score = 28.9 bits (63), Expect = 2.8
Identities = 40/143 (27%), Positives = 46/143 (32%), Gaps = 34/143 (23%)
Query: 54 GPRNAAAARPGPRSR--------WHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYL 105
G A A P PR R RC A G R G+ A P +A
Sbjct: 30 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN--------AQGPRLALQAR 81
Query: 106 GPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------EPHVAPGRAPPPRAGASPGS 154
P S +S P PR R PG +P P R P P A A G+
Sbjct: 82 AAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGA 137
Query: 155 RLLPGSPSLLL---PAATWRTWG 174
G + P A WR WG
Sbjct: 138 LASCGLRAGWAGWPPQAAWRAWG 160
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 45.8 bits (107), Expect = 2e-05
Identities = 46/134 (34%), Positives = 54/134 (40%), Gaps = 25/134 (18%)
Query: 58 AAAARPGPRSRWHKRCAAACG--ACARPPGHQLQPPGAGAPQPGVACS-------YLGPR 108
A RP PR A + A ++ PG P AGAP +A S + G +
Sbjct: 231 ALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQ 290
Query: 109 PQRTPCSAQSRPGWCAGPRRRHAPGTEP-HVAPGRAPPPRAGAS-------------PGS 154
P P S S PG A P AP P AP AP P++ AS PGS
Sbjct: 291 PLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGS 350
Query: 155 RL--LPGSPSLLLP 166
L PG PS LLP
Sbjct: 351 LLGAAPGLPSPLLP 364
Score = 30.0 bits (66), Expect = 1.3
Identities = 50/160 (31%), Positives = 57/160 (35%), Gaps = 32/160 (20%)
Query: 1 MSGPPSAPQ-GALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAA 59
M PP P AAP +P APS PG A P + G P AA
Sbjct: 233 MQRPPPRPSLSPAAAPSAPG------PAPSQ-LPGLAAL--PLSAGAPA---------AA 274
Query: 60 AARPGPRSRWHKRCAAACGA--CARPPGHQLQPPGAGAPQ----PGVACSYLGPRPQRTP 113
A GP + AA GA +RP P G P P A + P P P
Sbjct: 275 IAGSGPAAP-----AAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAP 329
Query: 114 CSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPP--PRAGAS 151
SA S A APG+ APG P P+ AS
Sbjct: 330 QSAASSQPQSASTPPALAPGSLLGAAPGLPSPLLPQTSAS 369
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 45.1 bits (105), Expect = 4e-05
Identities = 54/183 (29%), Positives = 66/183 (36%), Gaps = 41/183 (22%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSP-WACGPPHWGPQRGPRNAAAA 61
G P AP A + A +G Q P G PG P + P A G P G + +A A
Sbjct: 366 GFPGAPGAKGEAGPTGARGPEGAQGPR-GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA 424
Query: 62 R--------PGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP--------QPGVAC--S 103
PGPR PPG P GA P +PG+A
Sbjct: 425 PGIAGAPGFPGPRG---------------PPG----PQGATGPLGPKGQTGEPGIAGFKG 465
Query: 104 YLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSL 163
GP+ + P Q PG +R A G V P PP +PG+R PG L
Sbjct: 466 EQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGP--IGPPGERGAPGNRGFPGQDGL 523
Query: 164 LLP 166
P
Sbjct: 524 AGP 526
Score = 45.1 bits (105), Expect = 4e-05
Identities = 53/174 (30%), Positives = 63/174 (36%), Gaps = 25/174 (14%)
Query: 3 GPPSAPQGA------LAAPRSPAVRRKGLQAPSWGSPGRPAAHS-------PWACGPPHW 49
GPP PQGA + P + +A G PG P A GPP
Sbjct: 588 GPPG-PQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGP 646
Query: 50 GPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRP 109
G R A PGP PPG +P G P A +GPR
Sbjct: 647 AGPAGERGEQGA-PGPSG------FQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRG 699
Query: 110 QRTPCSAQSRPG--WCAGPR-RRHAPGTE-PHVAPGRAPPPRAGASPGSRLLPG 159
+R + PG GPR PGT+ P A G A PP A PG + +PG
Sbjct: 700 ERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 753
Score = 38.9 bits (89), Expect = 0.003
Identities = 45/168 (26%), Positives = 57/168 (33%), Gaps = 9/168 (5%)
Query: 3 GPPSA--PQGALAAPRSPAVRRKGLQAPSWGSPG-RPAAHSPWACGPPHWGPQRGPRNAA 59
GP A P+G P SP + G PG + +A +P G P + RGP
Sbjct: 384 GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 443
Query: 60 AARP--GPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQ 117
A GP+ + + A P G GAP P G R +
Sbjct: 444 GATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPI 503
Query: 118 SRPGWCAGPRRRHAPGTE----PHVAPGRAPPPRAGASPGSRLLPGSP 161
PG P R PG + P APG P G+ PG P
Sbjct: 504 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRP 551
Score = 37.7 bits (86), Expect = 0.006
Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 20/170 (11%)
Query: 2 SGPPSAPQGALAAPRS---PAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQ--RGPR 56
+GPP P G P + P + + +A G G P P P GP GP+
Sbjct: 827 TGPPG-PAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPTGVTGPK 884
Query: 57 NAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSA 116
A A+ P + A G PPG P G P P G R P
Sbjct: 885 GARGAQGPPGATGFPGAAGRVG----PPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGR 940
Query: 117 QSRPG--WCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLL 164
PG AGP PG + PG P A PG + L G ++
Sbjct: 941 AGEPGLQGPAGP-----PGEKGE--PGDDGPSGAEGPPGPQGLAGQRGIV 983
Score = 36.2 bits (82), Expect = 0.018
Identities = 45/152 (29%), Positives = 52/152 (34%), Gaps = 29/152 (19%)
Query: 23 KGLQAPSWGSPGRPAAHSPWA-CGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACA 81
+GL P G PG A+ GPP GP +A AR P R G A
Sbjct: 785 RGLTGPI-GPPGPAGANGEKGEVGPP------GPAGSAGARGAPGERGETGPPGPAGF-A 836
Query: 82 RPPGHQLQPPG------------AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRR 129
PPG QP AGAP P GP+ + G P
Sbjct: 837 GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGAT 896
Query: 130 HAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
PG A GR PP + +PG PG P
Sbjct: 897 GFPG-----AAGRVGPPGSNGNPGP---PGPP 920
Score = 35.8 bits (81), Expect = 0.023
Identities = 47/161 (29%), Positives = 56/161 (34%), Gaps = 28/161 (17%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAA 61
GPP PQGA P +P + G++ G PG A A P G P N +
Sbjct: 267 GPPG-PQGARGFPGTPGL--PGVKGHR-GYPGLDGAKGE-AGAPGVKGESGSPGENGSPG 321
Query: 62 RPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
GPR +R A G+ QP AG P P +GP
Sbjct: 322 PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGP------VGP-------------- 361
Query: 122 WCAGPRRRHAPGTEPHVAPGRAPPPRAGASP-GSRLLPGSP 161
GP APG + P A P P G PGSP
Sbjct: 362 -AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSP 401
Score = 34.7 bits (78), Expect = 0.052
Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 5 PSAPQGALAAPRSPAVRR-------KGLQAPSWGSPGRPA-AHSPWACGPPHWGPQRGP- 55
P P+G P R GLQ G PG P + A GP RGP
Sbjct: 1111 PQGPRGDKGEAGEPGERGLKGHRGFTGLQ----GLPGPPGPSGDQGASGPAGPSGPRGPP 1166
Query: 56 -------RNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGV---ACSYL 105
++ A PGP R + A PPG+ P G P PG+ A + L
Sbjct: 1167 GPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGL 1226
Query: 106 GPRPQRTPCSAQSRPGWCAGPRRRH 130
GPR + R AG R+H
Sbjct: 1227 GPREKGPDPLQYMRADQAAGGLRQH 1251
Score = 33.5 bits (75), Expect = 0.12
Identities = 56/199 (28%), Positives = 61/199 (30%), Gaps = 41/199 (20%)
Query: 9 QGALAAPRSPAVRR--KGLQAPSW--GSPGRPAAHS-PWACG----PPHWGPQR--GPRN 57
Q LA P+ R GL P G PGRP P A G P GPQ GP
Sbjct: 520 QDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSG 579
Query: 58 AAA--ARPGPRSRWHKRCAAAC-------GACARP-----------------PGHQLQPP 91
A RPGP R GA P PG +
Sbjct: 580 APGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETG 639
Query: 92 GAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTE----PHVAPGRAPPPR 147
AG P P G + P Q PG P PG + APG P
Sbjct: 640 AAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRG 699
Query: 148 AGASPGSRLLPGSPSLLLP 166
PG R PG+ L P
Sbjct: 700 ERGFPGERGSPGAQGLQGP 718
Score = 30.8 bits (68), Expect = 0.75
Identities = 43/146 (29%), Positives = 49/146 (33%), Gaps = 34/146 (23%)
Query: 45 GPPHWGPQ-----RGPRNAAAAR-----PGPRSRWHKRCAAACGACARPPGHQLQPPG-- 92
GPP GPQ +GPR + PGPR R + PPG PPG
Sbjct: 120 GPP--GPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPP-GPPGLG 176
Query: 93 --------------AGAPQPGVA---CSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTE 135
AG Q GV +GPR P A G+ P PG
Sbjct: 177 GNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVS 236
Query: 136 PHVAPGRAPPPRAGASPGSRLLPGSP 161
+ P R PP G PG G P
Sbjct: 237 GPMGP-RGPPGPPG-KPGDDGEAGKP 260
Score = 29.6 bits (65), Expect = 1.7
Identities = 43/171 (25%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 8 PQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAAR----- 62
P G P P +G + G PG A P GP G R + A+
Sbjct: 661 PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA--PGLVGPRGERGFPGERGSPGAQGLQGP 718
Query: 63 ---PG-PRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQS 118
PG P + K + G PPG Q P G P A GP+ R +
Sbjct: 719 RGLPGTPGTDGPKGASGPAG----PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKG 774
Query: 119 RPGWCAGPRRRHAPGTEPHVAP----------GRAPPPRAGASPGSRLLPG 159
G P + G + P G PP S G+R PG
Sbjct: 775 PEG---APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 822
Score = 29.3 bits (64), Expect = 2.2
Identities = 52/164 (31%), Positives = 60/164 (36%), Gaps = 40/164 (24%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAAR 62
GPP PQGA P P KG G PG A GP GP+ A
Sbjct: 438 GPPG-PQGA-TGPLGP----KG----QTGEPG--IAGFKGEQGPKGEPGPAGPQGA---- 481
Query: 63 PGPRSRWHKRCA----AACGACARPPGHQLQPPGAGAP-QPGVACSYLGPRPQRTPCSAQ 117
PGP KR A G PPG + P G P Q G+A GP+ +
Sbjct: 482 PGPAGEEGKRGARGEPGGVGPIG-PPGERGAPGNRGFPGQDGLA----GPK----GAPGE 532
Query: 118 SRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
P AGP+ + PGR P PG+R L G P
Sbjct: 533 RGPSGLAGPKGANGD-------PGRPGEP---GLPGARGLTGRP 566
Score = 27.3 bits (59), Expect = 8.3
Identities = 50/196 (25%), Positives = 59/196 (30%), Gaps = 42/196 (21%)
Query: 3 GPPS-----APQGALAAPRSPA-VRRKGLQAPSW--GSPGRPAAHSP-WACGPPHWGPQ- 52
GPP P+GA P GLQ P+ G G P P A GPP GPQ
Sbjct: 918 GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPP--GPQG 975
Query: 53 -------------RGPRNAAAARPGPRSRWHKRCAAACGACARPPG-------------- 85
RG R PGP K+ A PPG
Sbjct: 976 LAGQRGIVGLPGQRGERGFPGL-PGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP 1034
Query: 86 -HQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAP 144
+ P G P A G R + A PG P G + A
Sbjct: 1035 GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ 1094
Query: 145 PPRAGASP-GSRLLPG 159
P + P G+R + G
Sbjct: 1095 GPMGPSGPAGARGIQG 1110
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 45.1 bits (105), Expect = 4e-05
Identities = 54/183 (29%), Positives = 66/183 (36%), Gaps = 41/183 (22%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSP-WACGPPHWGPQRGPRNAAAA 61
G P AP A + A +G Q P G PG P + P A G P G + +A A
Sbjct: 297 GFPGAPGAKGEAGPTGARGPEGAQGPR-GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA 355
Query: 62 R--------PGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP--------QPGVAC--S 103
PGPR PPG P GA P +PG+A
Sbjct: 356 PGIAGAPGFPGPRG---------------PPG----PQGATGPLGPKGQTGEPGIAGFKG 396
Query: 104 YLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSL 163
GP+ + P Q PG +R A G V P PP +PG+R PG L
Sbjct: 397 EQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGP--IGPPGERGAPGNRGFPGQDGL 454
Query: 164 LLP 166
P
Sbjct: 455 AGP 457
Score = 45.1 bits (105), Expect = 4e-05
Identities = 53/174 (30%), Positives = 63/174 (36%), Gaps = 25/174 (14%)
Query: 3 GPPSAPQGA------LAAPRSPAVRRKGLQAPSWGSPGRPAAHS-------PWACGPPHW 49
GPP PQGA + P + +A G PG P A GPP
Sbjct: 519 GPPG-PQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGP 577
Query: 50 GPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRP 109
G R A PGP PPG +P G P A +GPR
Sbjct: 578 AGPAGERGEQGA-PGPSG------FQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRG 630
Query: 110 QRTPCSAQSRPG--WCAGPR-RRHAPGTE-PHVAPGRAPPPRAGASPGSRLLPG 159
+R + PG GPR PGT+ P A G A PP A PG + +PG
Sbjct: 631 ERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 684
Score = 38.9 bits (89), Expect = 0.003
Identities = 45/168 (26%), Positives = 57/168 (33%), Gaps = 9/168 (5%)
Query: 3 GPPSA--PQGALAAPRSPAVRRKGLQAPSWGSPG-RPAAHSPWACGPPHWGPQRGPRNAA 59
GP A P+G P SP + G PG + +A +P G P + RGP
Sbjct: 315 GPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ 374
Query: 60 AARP--GPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQ 117
A GP+ + + A P G GAP P G R +
Sbjct: 375 GATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPI 434
Query: 118 SRPGWCAGPRRRHAPGTE----PHVAPGRAPPPRAGASPGSRLLPGSP 161
PG P R PG + P APG P G+ PG P
Sbjct: 435 GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRP 482
Score = 37.7 bits (86), Expect = 0.006
Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 20/170 (11%)
Query: 2 SGPPSAPQGALAAPRS---PAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQ--RGPR 56
+GPP P G P + P + + +A G G P P P GP GP+
Sbjct: 758 TGPPG-PAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQ-GPTGVTGPK 815
Query: 57 NAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSA 116
A A+ P + A G PPG P G P P G R P
Sbjct: 816 GARGAQGPPGATGFPGAAGRVG----PPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGR 871
Query: 117 QSRPG--WCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLL 164
PG AGP PG + PG P A PG + L G ++
Sbjct: 872 AGEPGLQGPAGP-----PGEKGE--PGDDGPSGAEGPPGPQGLAGQRGIV 914
Score = 36.2 bits (82), Expect = 0.018
Identities = 45/152 (29%), Positives = 52/152 (34%), Gaps = 29/152 (19%)
Query: 23 KGLQAPSWGSPGRPAAHSPWA-CGPPHWGPQRGPRNAAAARPGPRSRWHKRCAAACGACA 81
+GL P G PG A+ GPP GP +A AR P R G A
Sbjct: 716 RGLTGPI-GPPGPAGANGEKGEVGPP------GPAGSAGARGAPGERGETGPPGPAGF-A 767
Query: 82 RPPGHQLQPPG------------AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRR 129
PPG QP AGAP P GP+ + G P
Sbjct: 768 GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGAT 827
Query: 130 HAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
PG A GR PP + +PG PG P
Sbjct: 828 GFPG-----AAGRVGPPGSNGNPGP---PGPP 851
Score = 35.8 bits (81), Expect = 0.023
Identities = 47/161 (29%), Positives = 56/161 (34%), Gaps = 28/161 (17%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGP-RNAAAA 61
GPP PQGA P +P + G++ G PG A A P G P N +
Sbjct: 198 GPPG-PQGARGFPGTPGL--PGVKGHR-GYPGLDGAKGE-AGAPGVKGESGSPGENGSPG 252
Query: 62 RPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
GPR +R A G+ QP AG P P +GP
Sbjct: 253 PMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGP------VGP-------------- 292
Query: 122 WCAGPRRRHAPGTEPHVAPGRAPPPRAGASP-GSRLLPGSP 161
GP APG + P A P P G PGSP
Sbjct: 293 -AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSP 332
Score = 34.7 bits (78), Expect = 0.052
Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 5 PSAPQGALAAPRSPAVRR-------KGLQAPSWGSPGRPA-AHSPWACGPPHWGPQRGP- 55
P P+G P R GLQ G PG P + A GP RGP
Sbjct: 1042 PQGPRGDKGEAGEPGERGLKGHRGFTGLQ----GLPGPPGPSGDQGASGPAGPSGPRGPP 1097
Query: 56 -------RNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGV---ACSYL 105
++ A PGP R + A PPG+ P G P PG+ A + L
Sbjct: 1098 GPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGL 1157
Query: 106 GPRPQRTPCSAQSRPGWCAGPRRRH 130
GPR + R AG R+H
Sbjct: 1158 GPREKGPDPLQYMRADQAAGGLRQH 1182
Score = 33.5 bits (75), Expect = 0.12
Identities = 56/199 (28%), Positives = 61/199 (30%), Gaps = 41/199 (20%)
Query: 9 QGALAAPRSPAVRR--KGLQAPSW--GSPGRPAAHS-PWACG----PPHWGPQR--GPRN 57
Q LA P+ R GL P G PGRP P A G P GPQ GP
Sbjct: 451 QDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSG 510
Query: 58 AAA--ARPGPRSRWHKRCAAAC-------GACARP-----------------PGHQLQPP 91
A RPGP R GA P PG +
Sbjct: 511 APGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETG 570
Query: 92 GAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTE----PHVAPGRAPPPR 147
AG P P G + P Q PG P PG + APG P
Sbjct: 571 AAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRG 630
Query: 148 AGASPGSRLLPGSPSLLLP 166
PG R PG+ L P
Sbjct: 631 ERGFPGERGSPGAQGLQGP 649
Score = 30.8 bits (68), Expect = 0.75
Identities = 43/146 (29%), Positives = 49/146 (33%), Gaps = 34/146 (23%)
Query: 45 GPPHWGPQ-----RGPRNAAAAR-----PGPRSRWHKRCAAACGACARPPGHQLQPPG-- 92
GPP GPQ +GPR + PGPR R + PPG PPG
Sbjct: 51 GPP--GPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPP-GPPGLG 107
Query: 93 --------------AGAPQPGVA---CSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTE 135
AG Q GV +GPR P A G+ P PG
Sbjct: 108 GNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVS 167
Query: 136 PHVAPGRAPPPRAGASPGSRLLPGSP 161
+ P R PP G PG G P
Sbjct: 168 GPMGP-RGPPGPPG-KPGDDGEAGKP 191
Score = 29.6 bits (65), Expect = 1.7
Identities = 43/171 (25%), Positives = 54/171 (31%), Gaps = 28/171 (16%)
Query: 8 PQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAAR----- 62
P G P P +G + G PG A P GP G R + A+
Sbjct: 592 PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGA--PGLVGPRGERGFPGERGSPGAQGLQGP 649
Query: 63 ---PG-PRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQS 118
PG P + K + G PPG Q P G P A GP+ R +
Sbjct: 650 RGLPGTPGTDGPKGASGPAG----PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKG 705
Query: 119 RPGWCAGPRRRHAPGTEPHVAP----------GRAPPPRAGASPGSRLLPG 159
G P + G + P G PP S G+R PG
Sbjct: 706 PEG---APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPG 753
Score = 29.3 bits (64), Expect = 2.2
Identities = 52/164 (31%), Positives = 60/164 (36%), Gaps = 40/164 (24%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAAR 62
GPP PQGA P P KG G PG A GP GP+ A
Sbjct: 369 GPPG-PQGA-TGPLGP----KG----QTGEPG--IAGFKGEQGPKGEPGPAGPQGA---- 412
Query: 63 PGPRSRWHKRCA----AACGACARPPGHQLQPPGAGAP-QPGVACSYLGPRPQRTPCSAQ 117
PGP KR A G PPG + P G P Q G+A GP+ +
Sbjct: 413 PGPAGEEGKRGARGEPGGVGPIG-PPGERGAPGNRGFPGQDGLA----GPK----GAPGE 463
Query: 118 SRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
P AGP+ + PGR P PG+R L G P
Sbjct: 464 RGPSGLAGPKGANGD-------PGRPGEP---GLPGARGLTGRP 497
Score = 27.3 bits (59), Expect = 8.3
Identities = 50/196 (25%), Positives = 59/196 (30%), Gaps = 42/196 (21%)
Query: 3 GPPS-----APQGALAAPRSPA-VRRKGLQAPSW--GSPGRPAAHSP-WACGPPHWGPQ- 52
GPP P+GA P GLQ P+ G G P P A GPP GPQ
Sbjct: 849 GPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPP--GPQG 906
Query: 53 -------------RGPRNAAAARPGPRSRWHKRCAAACGACARPPG-------------- 85
RG R PGP K+ A PPG
Sbjct: 907 LAGQRGIVGLPGQRGERGFPGL-PGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP 965
Query: 86 -HQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAP 144
+ P G P A G R + A PG P G + A
Sbjct: 966 GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ 1025
Query: 145 PPRAGASP-GSRLLPG 159
P + P G+R + G
Sbjct: 1026 GPMGPSGPAGARGIQG 1041
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 45.1 bits (105), Expect = 4e-05
Identities = 65/219 (29%), Positives = 76/219 (34%), Gaps = 64/219 (29%)
Query: 4 PPSAPQGALAAPRSPAVRRK---GLQAPSWGSPG--RPAAHSP------WACGPPHWGPQ 52
P S PQG ++ P+ PA R K G Q P W G A P GPP P+
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP---PR 170
Query: 53 RGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP-QPGV----------- 100
P PG R+ R AAA R P +L P AP +PG
Sbjct: 171 PAPPGTRCC-PGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADA 229
Query: 101 ----------ACSYLGPR-------PQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRA 143
+L PR P+RT AQ C G R AP +AP +
Sbjct: 230 LWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPA----LAPPKL 285
Query: 144 PPP----------------RAGASPGSRLLPGSPSLLLP 166
PP AS G R L GS SL LP
Sbjct: 286 SPPFPCLAQSASRAAGARRALSASRGRRGLLGSGSLALP 324
Score = 32.7 bits (73), Expect = 0.20
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 90 PPGAGAPQPGVACSYL-GPRPQRTPCSAQSRPGW-CAGPRRRHAPGTEPHVAP-GRAPPP 146
P A PQ ++ L PRP+R + RP W G A EP V G+ PPP
Sbjct: 112 PTPASYPQGTISPPQLPAPRPKRF--GGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 147 RAGASPGSRLLPGS 160
R A PG+R PG+
Sbjct: 170 RP-APPGTRCCPGA 182
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 45.1 bits (105), Expect = 4e-05
Identities = 65/219 (29%), Positives = 76/219 (34%), Gaps = 64/219 (29%)
Query: 4 PPSAPQGALAAPRSPAVRRK---GLQAPSWGSPG--RPAAHSP------WACGPPHWGPQ 52
P S PQG ++ P+ PA R K G Q P W G A P GPP P+
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP---PR 170
Query: 53 RGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP-QPGV----------- 100
P PG R+ R AAA R P +L P AP +PG
Sbjct: 171 PAPPGTRCC-PGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADA 229
Query: 101 ----------ACSYLGPR-------PQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRA 143
+L PR P+RT AQ C G R AP +AP +
Sbjct: 230 LWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPA----LAPPKL 285
Query: 144 PPP----------------RAGASPGSRLLPGSPSLLLP 166
PP AS G R L GS SL LP
Sbjct: 286 SPPFPCLAQSASRAAGARRALSASRGRRGLLGSGSLALP 324
Score = 32.7 bits (73), Expect = 0.20
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 90 PPGAGAPQPGVACSYL-GPRPQRTPCSAQSRPGW-CAGPRRRHAPGTEPHVAP-GRAPPP 146
P A PQ ++ L PRP+R + RP W G A EP V G+ PPP
Sbjct: 112 PTPASYPQGTISPPQLPAPRPKRF--GGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 147 RAGASPGSRLLPGS 160
R A PG+R PG+
Sbjct: 170 RP-APPGTRCCPGA 182
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 45.1 bits (105), Expect = 4e-05
Identities = 65/219 (29%), Positives = 76/219 (34%), Gaps = 64/219 (29%)
Query: 4 PPSAPQGALAAPRSPAVRRK---GLQAPSWGSPG--RPAAHSP------WACGPPHWGPQ 52
P S PQG ++ P+ PA R K G Q P W G A P GPP P+
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEPRVGKLGKGPP---PR 170
Query: 53 RGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP-QPGV----------- 100
P PG R+ R AAA R P +L P AP +PG
Sbjct: 171 PAPPGTRCC-PGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADA 229
Query: 101 ----------ACSYLGPR-------PQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRA 143
+L PR P+RT AQ C G R AP +AP +
Sbjct: 230 LWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLESGCRGHCSRGAPA----LAPPKL 285
Query: 144 PPP----------------RAGASPGSRLLPGSPSLLLP 166
PP AS G R L GS SL LP
Sbjct: 286 SPPFPCLAQSASRAAGARRALSASRGRRGLLGSGSLALP 324
Score = 32.7 bits (73), Expect = 0.20
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 90 PPGAGAPQPGVACSYL-GPRPQRTPCSAQSRPGW-CAGPRRRHAPGTEPHVAP-GRAPPP 146
P A PQ ++ L PRP+R + RP W G A EP V G+ PPP
Sbjct: 112 PTPASYPQGTISPPQLPAPRPKRF--GGKQRPLWRIRGWETTVARLPEPRVGKLGKGPPP 169
Query: 147 RAGASPGSRLLPGS 160
R A PG+R PG+
Sbjct: 170 RP-APPGTRCCPGA 182
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 45.1 bits (105), Expect = 4e-05
Identities = 54/188 (28%), Positives = 65/188 (34%), Gaps = 30/188 (15%)
Query: 4 PPSAPQGA------LAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWG---PQRG 54
PP PQG +PRSP + +G P P GPP G PQ
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGP 132
Query: 55 PRNAAAARPGPRSRWHKRCAAACGACARPP---GHQLQ--PPGAGAPQ------------ 97
P P P+ + + G PP G+Q Q PP G PQ
Sbjct: 133 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQG 192
Query: 98 PGVACSYLGPRPQRTPC-SAQSRPGWCAGPRRR---HAPGTEPHVAPGRAPPPRAGASPG 153
P GP PQ S+QS PG GP + G P + PPP+ G P
Sbjct: 193 PPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 252
Query: 154 SRLLPGSP 161
PG P
Sbjct: 253 GPPPPGKP 260
Score = 40.0 bits (92), Expect = 0.001
Identities = 47/168 (27%), Positives = 54/168 (32%), Gaps = 31/168 (18%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARP 63
PP PQG P K P G P P PP R PR+
Sbjct: 53 PPGKPQGP-----PPQGGNKPQGPPPPGKPQGP---------PPQGDKSRSPRSPPGKPQ 98
Query: 64 GPRSRWHKRCAAACGACARPPGHQLQPPGAGA------PQPGVACSYLGPRPQRTPC-SA 116
GP + + PPG PP G P PG GP PQ S
Sbjct: 99 GPPPQGGNQPQGP----PPPPGKPQGPPPQGGNRPQGPPPPGKP---QGPPPQGDKSRSP 151
Query: 117 QSRPGWCAGPRRR---HAPGTEPHVAPGRAPPPRAGASPGSRLLPGSP 161
+S PG GP + G P + PPP+ G P PG P
Sbjct: 152 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKP 199
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 45.1 bits (105), Expect = 4e-05
Identities = 47/147 (31%), Positives = 54/147 (36%), Gaps = 18/147 (12%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARP 63
PP AP+GA AA + A +P P +P A P R PR AAAA
Sbjct: 111 PPRAPRGAPAAAAAAAPPP---------TPAPPPPPAPVAAA----APARAPRAAAAAAT 157
Query: 64 GPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWC 123
P S A G A+ PP A A P VA GPR P A P
Sbjct: 158 APPSPG----PAQPGPRAQRAAPLAAPPPAPAAPPAVAPP-AGPRRAPPPAVAAREPPLP 212
Query: 124 AGPRRRHAPGTEPHVAPGRAPPPRAGA 150
P+ P + P PPP GA
Sbjct: 213 PPPQPPAPPQQQQPPPPQPQPPPEGGA 239
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/133 (30%), Positives = 43/133 (32%), Gaps = 29/133 (21%)
Query: 4 PPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRP----------AAHSPWACGPPHWGPQR 53
PP AP A A R+P AP P +P AA P PP P
Sbjct: 135 PPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPA 194
Query: 54 GPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTP 113
GPR A P P AA PP PP P P P+PQ P
Sbjct: 195 GPRRA----PPP-------AVAAREPPLPPPPQPPAPPQQQQPPP--------PQPQPPP 235
Query: 114 CSAQSRPGWCAGP 126
R G A P
Sbjct: 236 EGGAVRAGGAARP 248
Score = 36.2 bits (82), Expect = 0.018
Identities = 39/116 (33%), Positives = 44/116 (37%), Gaps = 16/116 (13%)
Query: 55 PRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQP-GVACSYLGPRPQRTP 113
PR A PR+ R A A A A PP PP P P A PR
Sbjct: 102 PRRGATPPAPPRA---PRGAPAAAAAAAPPPTPAPPP---PPAPVAAAAPARAPRAAAAA 155
Query: 114 CSAQSRPGWCA-GPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAA 168
+A PG GPR + A AP APPP A A+P + P P P A
Sbjct: 156 ATAPPSPGPAQPGPRAQRA-------APLAAPPP-APAAPPAVAPPAGPRRAPPPA 203
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 44.7 bits (104), Expect = 5e-05
Identities = 59/192 (30%), Positives = 70/192 (36%), Gaps = 37/192 (19%)
Query: 2 SGPPSAP--QGALAAPRSP----AVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGP 55
+GPP A +GA AP + A G PS G PG A P G P +RG
Sbjct: 897 TGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS-GPPGSVGA--PGLRGTPGKDGERGE 953
Query: 56 RNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAP-QPGVACSYLGPRPQRTPC 114
+ AA P + A G PG PPG G +PG+ S P P T
Sbjct: 954 KGAAGEEGSPGPVGPRGDPGAPGL----PG----PPGKGKDGEPGLRGSPGLPGPLGTKA 1005
Query: 115 SA-------------------QSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGASPGSR 155
+ + PG P R PG PG + PP SPGSR
Sbjct: 1006 ACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSR 1065
Query: 156 LLPGSPSLLLPA 167
LPG P PA
Sbjct: 1066 GLPGFPGPQGPA 1077
Score = 37.7 bits (86), Expect = 0.006
Identities = 43/155 (27%), Positives = 53/155 (34%), Gaps = 17/155 (10%)
Query: 10 GALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWA----CGPPHWGPQRGPRNAAAARPGP 65
G AP P VR + G G P GP GP P + P P
Sbjct: 804 GLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPA--GPPGLPGTTSLFTPHP 861
Query: 66 RSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAG 125
R + P G + P G P LGP+ P A+ + G
Sbjct: 862 RMPGEQG----------PKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGA 911
Query: 126 PRRRHAPGTEPHV-APGRAPPPRAGASPGSRLLPG 159
P PG HV APG + PP + +PG R PG
Sbjct: 912 PGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPG 946
Score = 36.2 bits (82), Expect = 0.018
Identities = 51/178 (28%), Positives = 60/178 (33%), Gaps = 35/178 (19%)
Query: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPA-AHSPWACGPPHWGPQRGP-----R 56
GPP PQG P P K + G PG P A P GP RGP
Sbjct: 1225 GPPG-PQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPE---GARGPPGFKGH 1280
Query: 57 NAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSA 116
+ PGPR + A G PG + P G P GP+ R P
Sbjct: 1281 TGDSGAPGPRGE-----SGAMGL----PGQEGLPGKDGDTGP---TGPQGPQGPRGPPGK 1328
Query: 117 QSRPGWCAGPRRRHAPGTE----PHVAPG-------RAPPPRAGAS--PGSRLLPGSP 161
PG P PG + + +PG R PP G PG +PG P
Sbjct: 1329 NGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP 1386
Score = 31.6 bits (70), Expect = 0.44
Identities = 50/173 (28%), Positives = 57/173 (32%), Gaps = 25/173 (14%)
Query: 3 GPPS--APQGALAAPRSPAVR-RKGLQAPSW-----GSPGRPAAHSPWACGPPHW--GPQ 52
GPP P G + AP R KG + G PG+P P GPQ
Sbjct: 572 GPPGLPGPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQ 631
Query: 53 RGPRNAAAARPG--PRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQ 110
+ A P P S + P GHQ GAP P A +GP +
Sbjct: 632 GEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQ------GAPGPPGARGPIGPEGR 685
Query: 111 RTPCSAQSRPGWCAGPRRRHAPGT----EPHVAPGRAPPPRAGASPGSRLLPG 159
P Q G PG P PG PP G SPG LPG
Sbjct: 686 DGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPG---LPG 735
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 43.9 bits (102), Expect = 9e-05
Identities = 57/190 (30%), Positives = 73/190 (38%), Gaps = 31/190 (16%)
Query: 5 PSAPQGALAAPRSPAVRRKGLQAPSWGS------PGRPAAHSPWACGPPHWGPQRGPRNA 58
PSAP G A R + Q PS G P RP+ SPW P P++G
Sbjct: 6986 PSAPSGG-APIRDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQ 7044
Query: 59 AAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQS 118
P P A C PPG PPG+ P V S +PQ P A++
Sbjct: 7045 EGCSPHP-------AVAPC-----PPGS--FPPGSCKEAPLVPSSPFLGQPQAPPAPAKA 7090
Query: 119 RPGWCA--GPRRRHAPGTE---PHVAPGRAPPPRAGASPGSRLLPGSPSLLL---PAATW 170
P + GP PG P +PG A +A +S S L GS + P+
Sbjct: 7091 SPPLDSKMGPGDISLPGRPKPGPCSSPGSA--SQASSSQVSSLRVGSSQVGTEPGPSLDA 7148
Query: 171 RTWGQESKVL 180
W QE++ L
Sbjct: 7149 EGWTQEAEDL 7158
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 43.9 bits (102), Expect = 9e-05
Identities = 52/175 (29%), Positives = 66/175 (37%), Gaps = 42/175 (24%)
Query: 15 PRS---PAVRRKGLQAP----SWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARPGPRS 67
PRS P KG +A S SP P H+P C P R G R
Sbjct: 40 PRSFKPPLSPEKGTKASGPQTSAPSPRDPGLHTP-PCSP---------------RRGRRG 83
Query: 68 RWHKRCAAACGACARPPGHQLQPPGAGAPQP---GVACSY--------LGPRPQRTPCSA 116
R + A G CA+P G PP G QP G CS+ LG +R P
Sbjct: 84 RPTQEVCPAPGPCAQPAG-TCPPPPTGEKQPRPHGFRCSHGSKRAPALLGAPARRPPAHI 142
Query: 117 QSRPGWCAGPRRRHAPGTEPHVAPGRAP--PPRAGASPGSRLLPGSPSLLLPAAT 169
++P W PR + P P P +A +PG R P +P+ P A+
Sbjct: 143 PAQPRW---PRLQPVAKRRARPVPPGLPGAPKQAALTPGRR--PLTPAAFAPKAS 192
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 43.9 bits (102), Expect = 9e-05
Identities = 55/156 (35%), Positives = 60/156 (38%), Gaps = 26/156 (16%)
Query: 2 SGPPSAPQG---ALAAPRSPA----------VRRKG--LQAPSWGSPGRPAAHSPWACGP 46
+GPP G A A RSPA V R G A S G+ PA P CG
Sbjct: 101 AGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCG- 159
Query: 47 PHWGPQRGPRNAAAARPG----PRS-RWHKRCAAACGACARPPGHQ-LQPPG-AGAPQPG 99
G G + A RPG PRS +R AA G A PG P G A A P
Sbjct: 160 ---GTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPA 216
Query: 100 VACSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTE 135
A S P P A + GW A P PGTE
Sbjct: 217 AAASVAPPPPAVAGAPAAAFRGWVAAPDPGCTPGTE 252
Score = 40.8 bits (94), Expect = 7e-04
Identities = 47/154 (30%), Positives = 52/154 (33%), Gaps = 24/154 (15%)
Query: 18 PAVRRKGLQAP------SWGSPGRPAAHSPWACGPPH---WGPQRGPRNAAAARPGPRSR 68
PA R+G P S GS P A P C P WGP AA R GP
Sbjct: 45 PAGARRGHSPPTVAPAASAGSQEHPGAGGP-LCFPARSAAWGPPARASRAAGRRAGP--- 100
Query: 69 WHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRR 128
G R PG +P PG A + +A S G + P R
Sbjct: 101 --------AGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPAR 152
Query: 129 RHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPS 162
R P P RA PGS LP SPS
Sbjct: 153 RLPP---PCGGTSLGAGSRALRRPGSAALPRSPS 183
Score = 27.3 bits (59), Expect = 8.3
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 124 AGPRRRHAPGTEPHVAPGRAPPPRAGASPGSRLLPGSPSLLLPAATWRTWGQESKVLR 181
AG RR H+P P VAP AS GS+ PG+ L A WG ++ R
Sbjct: 46 AGARRGHSP---PTVAPA--------ASAGSQEHPGAGGPLCFPARSAAWGPPARASR 92
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.480
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,476,343
Number of Sequences: 37866
Number of extensions: 1058804
Number of successful extensions: 9590
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 1397
Number of HSP's that attempted gapping in prelim test: 6613
Number of HSP's gapped (non-prelim): 3626
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.