Guide to the Human Genome
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Name: STAG2 Sequence: fasta or formatted (1231aa) NCBI GI: 31563531
Description:

stromal antigen 2 isoform b

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [1268aa] stromal antigen 2 isoform a
alt prot [1268aa] stromal antigen 2 isoform a
alt mRNA [1231aa] stromal antigen 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         67           2
 C cysteine            1.7         21           1
 D aspartate           6.9         85           3
 E glutamate           8.5        105           2
 F phenylalanine       4.3         53           3
 G glycine             4.7         58           3
 H histidine           2.4         29           2
 I isoleucine          5.5         68           2
 K lysine              6.7         83           2
 L leucine            10.7        132           3
 M methionine          4.5         55           2
 N asparagine          4.0         49           2
 P proline             3.0         37           2
 Q glutamine           4.9         60           2
 R arginine            5.2         64           2
 S serine              7.1         87           4
 T threonine           5.7         70           2
 V valine              5.0         61           2
 W tryptophan          0.8         10           1
 Y tyrosine            3.0         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stromal antigen 2 isoform b 
STAG2                 1.000   stromal antigen 2 isoform b 
STAG2                 0.992   stromal antigen 2 isoform a 
STAG2                 0.992   stromal antigen 2 isoform a 
STAG1                 0.702   stromal antigen 1 
STAG3                 0.448   stromal antigen 3 
STAG3L1               0.069   stromal antigen 3-like 1 isoform 1 
STAG3L4               0.058   stromal antigen 3-like 4 
STAG3L2               0.056   STAG3-like 
STAG3L3               0.055   stromal antigen 3-like 3 
STAG3L1               0.040   stromal antigen 3-like 1 isoform 2 
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
CIT                   0.005   citron 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 3 
FBXO41                0.003   F-box protein 41 
MCM5                  0.003   minichromosome maintenance complex component 5 [Homo...
TRIOBP                0.003   TRIO and F-actin binding protein isoform 2 
TRIOBP                0.003   TRIO and F-actin binding protein isoform 1 
C1QTNF2               0.003   C1q and tumor necrosis factor related protein 2 [Hom...
CEP250                0.003   centrosomal protein 2 
C10orf68              0.003   chromosome 10 open reading frame 68 
SLC24A2               0.002   solute carrier family 24 (sodium/potassium/calcium ex...
NBPF20                0.002   hypothetical protein LOC400818 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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