Guide to the Human Genome
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Name: STAG3L3 Sequence: fasta or formatted (134aa) NCBI GI: 148236295
Description:

stromal antigen 3-like 3

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7          5           1
 C cysteine            4.5          6           1
 D aspartate           6.0          8           1
 E glutamate           6.7          9           2
 F phenylalanine       3.0          4           1
 G glycine             4.5          6           1
 H histidine           1.5          2           1
 I isoleucine          7.5         10           1
 K lysine              6.7          9           1
 L leucine            11.9         16           2
 M methionine          6.0          8           1
 N asparagine          1.5          2           1
 P proline             2.2          3           1
 Q glutamine           0.7          1           1
 R arginine            6.7          9           1
 S serine              6.0          8           1
 T threonine           4.5          6           1
 V valine              9.7         13           1
 W tryptophan          2.2          3           1
 Y tyrosine            4.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stromal antigen 3-like 3 
STAG3L2               0.976   STAG3-like 
STAG3L1               0.832   stromal antigen 3-like 1 isoform 1 
STAG3                 0.804   stromal antigen 3 
STAG2                 0.536   stromal antigen 2 isoform b 
STAG2                 0.536   stromal antigen 2 isoform b 
STAG2                 0.536   stromal antigen 2 isoform a 
STAG2                 0.536   stromal antigen 2 isoform a 
STAG1                 0.536   stromal antigen 1 
STAG3L1               0.364   stromal antigen 3-like 1 isoform 2 
AP1B1                 0.020   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.020   adaptor-related protein complex 1 beta 1 subunit iso...
CKAP5                 0.012   colonic and hepatic tumor over-expressed protein iso...
CKAP5                 0.012   colonic and hepatic tumor over-expressed protein iso...
AP2B1                 0.012   adaptor-related protein complex 2, beta 1 subunit is...
AP2B1                 0.012   adaptor-related protein complex 2, beta 1 subunit iso...
NLRP9                 0.008   NLR family, pyrin domain containing 9 
EIF2C2                0.008   eukaryotic translation initiation factor 2C, 2 [Homo...
SIN3B                 0.004   SIN3 homolog B, transcription regulator 
CARD14                0.004   caspase recruitment domain protein 14 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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