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Search of human proteins with 5730021
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5730021 regulatory solute carrier protein, family 1, member
1 [Homo sapiens]
(617 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5730021 regulatory solute carrier protein, family 1, member 1... 1222 0.0
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 38 0.024
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 38 0.031
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 37 0.054
gi|65507253 hypothetical protein LOC55196 [Homo sapiens] 37 0.070
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 36 0.092
gi|238859647 G protein-coupled receptor 128 [Homo sapiens] 35 0.16
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 34 0.35
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 34 0.35
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 34 0.35
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 34 0.35
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 34 0.45
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 34 0.45
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 34 0.45
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [... 34 0.45
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 34 0.45
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 34 0.45
gi|21361116 versican isoform 1 [Homo sapiens] 33 0.59
gi|7706589 GNAS complex locus NESP55 [Homo sapiens] 33 0.59
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.59
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.59
gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens] 33 0.59
gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens] 33 0.59
gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Hom... 33 0.59
gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Hom... 33 0.59
gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo... 33 0.59
gi|190194429 zinc finger protein 267 [Homo sapiens] 33 0.59
gi|46852172 kinesin family member 13B [Homo sapiens] 33 0.59
gi|83367077 mucin 16 [Homo sapiens] 33 0.78
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 33 0.78
>gi|5730021 regulatory solute carrier protein, family 1, member 1
[Homo sapiens]
Length = 617
Score = 1222 bits (3161), Expect = 0.0
Identities = 617/617 (100%), Positives = 617/617 (100%)
Query: 1 MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASA 60
MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASA
Sbjct: 1 MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASA 60
Query: 61 EFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQG 120
EFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQG
Sbjct: 61 EFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQG 120
Query: 121 LKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQ 180
LKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQ
Sbjct: 121 LKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQ 180
Query: 181 QKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECS 240
QKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECS
Sbjct: 181 QKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECS 240
Query: 241 GCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEI 300
GCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEI
Sbjct: 241 GCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEI 300
Query: 301 LNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELH 360
LNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELH
Sbjct: 301 LNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELH 360
Query: 361 ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI 420
ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI
Sbjct: 361 ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI 420
Query: 421 SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSVTVTSAKT 480
SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSVTVTSAKT
Sbjct: 421 SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSVTVTSAKT 480
Query: 481 SNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPETRE 540
SNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPETRE
Sbjct: 481 SNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPETRE 540
Query: 541 NVCPDASRPLLEYEPPTSHPSSSPAILPPLIFPATDIDRILRAGFTLQEALGALHRVGGN 600
NVCPDASRPLLEYEPPTSHPSSSPAILPPLIFPATDIDRILRAGFTLQEALGALHRVGGN
Sbjct: 541 NVCPDASRPLLEYEPPTSHPSSSPAILPPLIFPATDIDRILRAGFTLQEALGALHRVGGN 600
Query: 601 ADLALLVLLAKNIVVPT 617
ADLALLVLLAKNIVVPT
Sbjct: 601 ADLALLVLLAKNIVVPT 617
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 38.1 bits (87), Expect = 0.024
Identities = 94/499 (18%), Positives = 192/499 (38%), Gaps = 73/499 (14%)
Query: 56 LKASAEFQLNSEKK---EHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEK 112
LK SAEFQ EKK Q+L D A + Q + SS + V L++
Sbjct: 994 LKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQR 1053
Query: 113 SAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKD---WHPENQNLSQVSDPQQHE 169
++ + + +++A ++V + +E ++ L D + +S+++ +QH
Sbjct: 1054 ASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHL 1113
Query: 170 EPGNEQYE--VAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDP 227
E ++ E + + KAS ++ + L +E + + DLE + L ++
Sbjct: 1114 EETTQKAESQLLECKASWEER------ERMLKDEVSKCVCRCEDLE--KQNRLLHDQIEK 1165
Query: 228 PSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNA------NVKNIGALDLT 281
S K E + + E +Q+ ++ +L R+ V + +L
Sbjct: 1166 LSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYR 1225
Query: 282 LDNPLMEVETSKCNPSSEILNDSIST---------QDLQPPETNVEIPGTNKEYGHYSSP 332
L+E E + S + + + ++ ET + TNK
Sbjct: 1226 QRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNK-------- 1277
Query: 333 SLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSI 392
+ E E+ + A +++L EL ++ + A+ SE +S + + +
Sbjct: 1278 ----MLREEKERLEQDLQQMQAKVRKL-ELDILPLQEANAELSE----KSGMLQAEKKLL 1328
Query: 393 KDLSERW-TQNEHLTQNEQCPQVSFHQAISVSVE---------TEKLTGTSSDTGREAVE 442
++ +RW +N+HL ++ P ++ + E TE++ ++ R
Sbjct: 1329 EEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNAS 1388
Query: 443 NVNFRSLGDGLSTDKEGVPKSRESINKN----------RSVTVTSAKTSNQLHCTLGVEI 492
N ++L L D V +E+I K+ + T+T K + + T E
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEE- 1447
Query: 493 SPKLLAGEEDALNQTSEQT 511
L ++D + +TS Q+
Sbjct: 1448 ----LKAQQDKVMETSAQS 1462
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 37.7 bits (86), Expect = 0.031
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 20/214 (9%)
Query: 346 EESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQN--- 402
EES + A+ KE+ L K +NT EE I ET+ ++++ T
Sbjct: 1473 EESQALLDASQKEVQALSTELLK--LKNTYEESIVGQETLRRENKNLQEEISNLTNQVRE 1530
Query: 403 --EHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGV 460
++LT+ E+ ++ + V V E+ G + + + + L +++
Sbjct: 1531 GTKNLTEMEKVKKLIEEEKTEVQVTLEETEG-ALERNESKILHFQLELLEAKAELERKLS 1589
Query: 461 PKSRESIN--KNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEED----------ALNQTS 508
K E N + + T+ S ++S +E++ EED A Q S
Sbjct: 1590 EKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLNEMELQLSCANRQVS 1649
Query: 509 EQTKSLSSNFILVKDLGQGIQNSVTDRPETRENV 542
E TKSL I +KDL + +S + +E V
Sbjct: 1650 EATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQV 1683
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 37.0 bits (84), Expect = 0.054
Identities = 46/239 (19%), Positives = 94/239 (39%), Gaps = 43/239 (17%)
Query: 337 SCQPSVESAEESCPSITAALKELHELLVVSSKPASENTS------------EEVIC---- 380
SC+ +E + C +T +K++ + + V + SE E +C
Sbjct: 734 SCERLLELKKNHCELLTVKIKKMEDKVNVLQRELSETKEIKSQLEHQKVEWERELCSLRF 793
Query: 381 ----QSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAISVSVET---------- 426
+ E T + + E+ + E + E V Q + +S++T
Sbjct: 794 SLNQEEEKRRNADTLYEKIREQLRRKEEQYRKE----VEVKQQLELSLQTLEMELRTVKS 849
Query: 427 --EKLTGTSSDTGREAVENVNFRSLGDGLSTD----KEGVPKSRESINKNRSVTVTSAKT 480
++ +D R+ N R L DG+ T+ ++ + +++ +N S + K
Sbjct: 850 NLNQVVQERNDAQRQLSREQNARMLQDGILTNHLSKQKEIEMAQKKMNSENSHSHEEEKD 909
Query: 481 SNQLHCTLGVEISPKLLAGEEDAL-NQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPET 538
+ + L EI+ +L E D + NQ E+ K + +VK+ + +Q ++ ET
Sbjct: 910 LSHKNSMLQEEIA--MLRLEIDTIKNQNQEKEKKCFEDLKIVKEKNEDLQKTIKQNEET 966
>gi|65507253 hypothetical protein LOC55196 [Homo sapiens]
Length = 1747
Score = 36.6 bits (83), Expect = 0.070
Identities = 91/503 (18%), Positives = 188/503 (37%), Gaps = 64/503 (12%)
Query: 98 QNSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQ 157
QN +E ++ GN + F+ R T + +E EK N
Sbjct: 325 QNPNENVSTIGNFTNLKVNTNSKQPFNSPIRSSVDGVQTLAQTNE------EKIMDSCNP 378
Query: 158 NLSQVSDPQQHEEPG----------NEQYEVAQQKASHDQEYLCNIGDLELPEERQQN-- 205
+QV D +E +++ +K +++ L G +++
Sbjct: 379 TSNQVLDTSVAKEKLVRDIKTLVEIKQKFSELARKIKINKDLLMAAGCIKMTNTSYSEPA 438
Query: 206 QHKIVDLEATMKGNGLPQ--NVDPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLN 263
Q+ + L+ T K PQ V P +A++ P+ +++A+ + +
Sbjct: 439 QNSKLSLKQTAKIQSGPQITPVMPENAERQTPTV-------------VESAETNKTQCML 485
Query: 264 STGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSE--ILNDSISTQDLQPPETNVEIPG 321
++ Q N + +D L NP+ + +PS + +L S ++ N ++
Sbjct: 486 NSDIQEVNCRRFNQVDSVLPNPVYSEKRPMPDPSHDVKVLTSKTSAVEMTQAVLNTQLSS 545
Query: 322 TNKEYGHYSSPSLCGSCQ-PSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVIC 380
N +SP++C + P S EE I + +L+++ + T + V+
Sbjct: 546 ENVTKVEQNSPAVCETISVPKSMSTEEYKSKI-----QNENMLLLALLSQARKTQKTVLK 600
Query: 381 Q-SETIAEGQTSIKDL--SERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDT- 436
++TI + + ++ + + T N+ +N + P S ++ +G S T
Sbjct: 601 DANQTIQDSKPDSCEMNPNTQMTGNQLNLKNMETPSTS--NVSGRVLDNSFCSGQESSTK 658
Query: 437 --GREAVENVNFRSLGDGLSTDKE---GVPKSRESINKNRSVTVTSAKTSNQLHCTLGVE 491
++ + + L LS K+ K +E + T +H
Sbjct: 659 GMPAKSDSSCSMEVLATCLSLWKKQPSDTAKEKECDKLRTNTTAVGISKPANIHVK---- 714
Query: 492 ISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTDRPETRENVCPDASRPLL 551
SP + G ++ N+ S ++ + + ++ GI ++T E + V PL+
Sbjct: 715 -SPCSVVGNSNSQNKISNPSQQTALSMVMHNYESSGI--NITKGTELQIAVV----SPLV 767
Query: 552 EYEPPT-SHPSSSPAILPPLIFP 573
E T S +PA+LP ++P
Sbjct: 768 LSEVKTLSVKGITPAVLPETVYP 790
Score = 32.3 bits (72), Expect = 1.3
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 13/189 (6%)
Query: 127 TRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQQKASHD 186
TRQ+ ++ S + FL KD + ++ +L Q P++ + + +QK D
Sbjct: 1321 TRQKKHVTQNSRPLKTKTAFLPNKDVYKKHSSLGQSLSPEKIKL--KLKSVSFKQKRKLD 1378
Query: 187 QEYLCNIGDLELPEERQQNQHKIVDLEATMK-GNGLPQNVDPPSAKKSIPSSECS--GCS 243
Q N+ D+E+ +++ Q + + AT K G+ L + K+ + S+ S +
Sbjct: 1379 QG---NVLDMEVKKKKHDKQEQKGSVGATFKLGDSLSNPNERAIVKEKMVSNTKSVDTKA 1435
Query: 244 NSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLME-----VETSKCNPSS 298
+S F I T ++ L + N K I ++ D+ M V+ C S+
Sbjct: 1436 SSSKFSRILTPKEYLQRQKHKEALSNKASKKICVKNVPCDSEHMRPSKLAVQVESCGKSN 1495
Query: 299 EILNDSIST 307
E + + T
Sbjct: 1496 EKHSSGVQT 1504
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 36.2 bits (82), Expect = 0.092
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 56 LKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMP----MQNSSEEIT-VAGNL 110
LK + + +K SL L + A+ P + PA+P +Q+ +E+ VAG L
Sbjct: 266 LKKEKQQDMRRVEKLERSLSKLKNQM--AEPLPPEP-PAVPSEVELQHLRKELERVAGEL 322
Query: 111 EKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQ-HE 169
+ +++ Q + L+ RQE + R+ + + + E ++++L Q++ PQ E
Sbjct: 323 QAQVKKN-QRISL-LNQRQEERIQEQEERLRKQEERIQE-----QHKSLQQLAKPQSVFE 375
Query: 170 EPGNEQYEVAQ--QKASHDQEYLCNIGDLELPEERQQNQHKIVDLE-ATMKGNGLPQNVD 226
EP NE Q Q+ QE +G+ L QQNQ L + G G +++D
Sbjct: 376 EPNNENKNALQLEQQVKELQE---KLGEEHLEAASQQNQQLTAQLSLMALPGEGHGEHLD 432
Query: 227 -----PPSAKKSIP 235
P S+P
Sbjct: 433 SEGEEAPQPMPSVP 446
>gi|238859647 G protein-coupled receptor 128 [Homo sapiens]
Length = 797
Score = 35.4 bits (80), Expect = 0.16
Identities = 47/231 (20%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 336 GSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDL 395
G+C ++E+ E+ +TA L + + + + A++ T+E + + + + + ++
Sbjct: 137 GNCNENLETLEKQVKDVTAPLNNISSEVQILTSDANKLTAENITSATRVVGQIFNTSRNA 196
Query: 396 SER------WTQNEHLTQNEQCPQVSFHQAISVSVET--EKLTGTSSDTGREAVENVNFR 447
S T ++ L +E Q A ++ T E++ S G ++V N
Sbjct: 197 SPEAKKVAIVTVSQLLDASEDAFQRVAATANDDALTTLIEQMETYSLSLGNQSVVEPNIA 256
Query: 448 SLGDGLSTDKEGVPKS-RESINKNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQ 506
S++ P + R S+ K S ++ S+ T +H + ++P + LN
Sbjct: 257 IQSANFSSENAVGPSNVRFSVQKGASSSLVSSSTF--IHTNVD-GLNPDAQTELQVLLNM 313
Query: 507 TSEQTKSL------------SSNFILVKDLGQGIQNSVTDRPETRENVCPD 545
T TK+ S F D Q I +S TD E ++ D
Sbjct: 314 TKNYTKTCGFVVYQNDKLFQSKTFTAKSDFSQKIISSKTDENEQDQSASVD 364
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 34.3 bits (77), Expect = 0.35
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 34/263 (12%)
Query: 110 LEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHE 169
L++ ++ + L L +Q+ + + Q ++ + Q Q QQ +
Sbjct: 135 LQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQ 191
Query: 170 EPGNEQYEVAQQKASHDQ---EYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVD 226
PG + E QQ+ Q + L L ++ QQ QH + +++ GL ++
Sbjct: 192 HPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-----SLQRQGL-ISIP 245
Query: 227 PPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDN-- 284
P A + S +G S +E QQ + ++ +K+ G LDLT +N
Sbjct: 246 PGQAALPVQSLPQAGLSPAE-------IQQLWKEVTGVHSMEDNGIKH-GGLDLTTNNSS 297
Query: 285 PLMEVETSKCNP---SSEILNDSISTQDLQPPETNVEIPGTNKE-YGHYSSPSLCGSCQ- 339
TSK +P I+N S + ++ E G + YGH G C+
Sbjct: 298 STTSSNTSKASPPITHHSIVNGQSSVLSARRDSSSHEETGASHTLYGH-------GVCKW 350
Query: 340 PSVESAEESCPSITAALKELHEL 362
P ES E L H L
Sbjct: 351 PGCESICEDFGQFLKHLNNEHAL 373
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 34.3 bits (77), Expect = 0.35
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 34/263 (12%)
Query: 110 LEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHE 169
L++ ++ + L L +Q+ + + Q ++ + Q Q QQ +
Sbjct: 43 LQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQ 99
Query: 170 EPGNEQYEVAQQKASHDQ---EYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVD 226
PG + E QQ+ Q + L L ++ QQ QH + +++ GL ++
Sbjct: 100 HPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-----SLQRQGL-ISIP 153
Query: 227 PPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDN-- 284
P A + S +G S +E QQ + ++ +K+ G LDLT +N
Sbjct: 154 PGQAALPVQSLPQAGLSPAE-------IQQLWKEVTGVHSMEDNGIKH-GGLDLTTNNSS 205
Query: 285 PLMEVETSKCNP---SSEILNDSISTQDLQPPETNVEIPGTNKE-YGHYSSPSLCGSCQ- 339
TSK +P I+N S + ++ E G + YGH G C+
Sbjct: 206 STTSSNTSKASPPITHHSIVNGQSSVLSARRDSSSHEETGASHTLYGH-------GVCKW 258
Query: 340 PSVESAEESCPSITAALKELHEL 362
P ES E L H L
Sbjct: 259 PGCESICEDFGQFLKHLNNEHAL 281
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 34.3 bits (77), Expect = 0.35
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 34/263 (12%)
Query: 110 LEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHE 169
L++ ++ + L L +Q+ + + Q ++ + Q Q QQ +
Sbjct: 160 LQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQ 216
Query: 170 EPGNEQYEVAQQKASHDQ---EYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVD 226
PG + E QQ+ Q + L L ++ QQ QH + +++ GL ++
Sbjct: 217 HPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLL-----SLQRQGL-ISIP 270
Query: 227 PPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDN-- 284
P A + S +G S +E QQ + ++ +K+ G LDLT +N
Sbjct: 271 PGQAALPVQSLPQAGLSPAE-------IQQLWKEVTGVHSMEDNGIKH-GGLDLTTNNSS 322
Query: 285 PLMEVETSKCNP---SSEILNDSISTQDLQPPETNVEIPGTNKE-YGHYSSPSLCGSCQ- 339
TSK +P I+N S + ++ E G + YGH G C+
Sbjct: 323 STTSSNTSKASPPITHHSIVNGQSSVLSARRDSSSHEETGASHTLYGH-------GVCKW 375
Query: 340 PSVESAEESCPSITAALKELHEL 362
P ES E L H L
Sbjct: 376 PGCESICEDFGQFLKHLNNEHAL 398
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 34.3 bits (77), Expect = 0.35
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 461 PKSRESINKNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFIL 520
P S ++ ++ + T+T + T TL +P L L +S T + SS IL
Sbjct: 136 PSSTPTLTRSSTPTLTPSSTP-----TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPIL 190
Query: 521 VKDLGQGIQNSVTDR--PETRENVCPDASRPLLEYEPPTSHPSSSPAILP 568
+ + S T P + + P + L+ PT PSS+P + P
Sbjct: 191 TRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTP 240
Score = 32.0 bits (71), Expect = 1.7
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 461 PKSRESINKNRSVTVTSAKTSNQLHC---TLGVEISPKLLAGEEDALNQTSEQTKSLSSN 517
P S ++ + + T+T T C TL +P L L +S T + SS
Sbjct: 56 PSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSST 115
Query: 518 FILVKDLGQGIQNSVTDRPETRENVCPDASRPLLEYEPPTSHPSSSPAILP---PLIFPA 574
L ++ T P + + P ++ L PT PSS+P + P P + P+
Sbjct: 116 PTLTPS------STPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPS 169
Query: 575 T 575
+
Sbjct: 170 S 170
Score = 30.0 bits (66), Expect = 6.6
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 461 PKSRESINKNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSNFIL 520
P S ++ + + T+T + T TL +P L L +S T + SS L
Sbjct: 80 PCSTPTLTPSNTPTLTPSSTP-----TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTL 134
Query: 521 VKDLGQGIQNSVTDR--PETRENVCPDASRPLLEYEPPTSHPSSSPAILP 568
+ S T P + + P ++ L PT PSS+P + P
Sbjct: 135 TPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTP 184
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 33.9 bits (76), Expect = 0.45
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 35/188 (18%)
Query: 251 IDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSIST--Q 308
++T ++ ++ G ++ N +L +N L +K S E N+S++ +
Sbjct: 638 VETEDVEIIATCDTFGNEDFNNIQDSENNLLKNNLL----NTKLEKSLEEKNESLTEHPR 693
Query: 309 DLQPPETNVE-IPGTNKEYGHYSSPSLCGS-CQPSVESAEESCPSITAALKELHELLVV- 365
+ P+T++E I E + P C S C ES E PS+ A LK+++E V
Sbjct: 694 STELPKTHIEQIQKHFSEDNNEMIPMECDSFCSDQNESEVE--PSVNADLKQMNENSVTH 751
Query: 366 ---SSKPASENTSEEVICQSETIAEGQTSIKDL-----------------SERWTQNEHL 405
++ P+S+ E+V ET+++ S KD S W+ N+
Sbjct: 752 CSENNMPSSDLADEKV----ETVSQPSESPKDTIDKTKKPRTRRSRFHSPSTTWSPNKDT 807
Query: 406 TQNEQCPQ 413
Q ++ PQ
Sbjct: 808 PQEKKRPQ 815
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 33.9 bits (76), Expect = 0.45
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 56 LKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMP----MQNSSEEIT-VAGNL 110
LK + + +K SL L + A+ P + PA+P +Q+ +E+ VAG L
Sbjct: 266 LKKEKQQDMRRVEKLERSLSKLKNQM--AEPLPPEP-PAVPSEVELQHLRKELERVAGEL 322
Query: 111 EKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQ-HE 169
+ +++ Q + L+ RQE + R+ + + + E ++++L Q++ PQ E
Sbjct: 323 QAQVKKN-QRISL-LNQRQEERIQEQEERLRKQEERIQE-----QHKSLQQLAKPQSVFE 375
Query: 170 EPGNEQYEVAQ--QKASHDQEYLCNIGDLELPEERQQNQHKIVDL 212
EP NE Q Q+ QE +G+ L QQNQ L
Sbjct: 376 EPNNENKNALQLEQQVKELQE---KLGEEHLEAASQQNQQLTAQL 417
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 33.9 bits (76), Expect = 0.45
Identities = 85/517 (16%), Positives = 185/517 (35%), Gaps = 16/517 (3%)
Query: 2 SSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASAE 61
SS S ++ + SS S + S S S S SDS + K+ + S++
Sbjct: 590 SSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSD 649
Query: 62 FQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQGL 121
NS+ + + + SD + S+D + + S + S + + + N +S++ S
Sbjct: 650 SSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDS-- 707
Query: 122 KFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQQ 181
+ ++S S S+ + ++ N S SD ++ + +
Sbjct: 708 -----SDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSN-SSDSSDSSDS 761
Query: 182 KASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECSG 241
S D + D + D + + + + + S SS+ S
Sbjct: 762 SNSSDSSDSSDSSD-------SSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSD 814
Query: 242 CSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKCNPSSEIL 301
S+S++ D++ S + +++ + + + D N +S + SS+
Sbjct: 815 SSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSS 874
Query: 302 NDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELHE 361
N S S+ E++ ++ S S + S +S+ S S ++ +
Sbjct: 875 NSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSN 934
Query: 362 LLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAIS 421
S+ S ++S+ + + ++ D S+ + + + N S + S
Sbjct: 935 SSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDS 994
Query: 422 VSVETEKLTGTSSDTGREA-VENVNFRSLGDGLSTDKEGVPKSRESINKNRSVTVTSAKT 480
+ SSD+ + N + S S + S S + + S + S+ +
Sbjct: 995 SDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1054
Query: 481 SNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSN 517
SN + + S + + + +SE + S S+
Sbjct: 1055 SNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSS 1091
>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
[Homo sapiens]
Length = 969
Score = 33.9 bits (76), Expect = 0.45
Identities = 80/403 (19%), Positives = 158/403 (39%), Gaps = 37/403 (9%)
Query: 155 ENQNLSQVSDPQQHEEPGNEQY-EVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLE 213
+ QN+ ++ H+E +++ E+ Q + + D+ N ++ L + RQ+ K V LE
Sbjct: 432 QEQNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEAN--EMLLEKLRQRIHDKAVALE 489
Query: 214 ATM--KGNGLPQNV-DPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNA 270
+ K + L + + + ++ + + + QS+ +LL + G +
Sbjct: 490 RAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVE 549
Query: 271 NVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYS 330
+ +L ME + S+ E + + T + NKE S
Sbjct: 550 QLSTT-CQNLQWLKEEMETKFSRWQKEQESIIQQLQTS----------LHDRNKEVEDLS 598
Query: 331 SPSLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSE-EVICQS------E 383
+ LC E AEE C + + L +LL +K E+ E + + QS E
Sbjct: 599 ATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQVLEHEMEIQGLLQSVSTREQE 658
Query: 384 TIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREAVEN 443
+ A + ++ L ER ++ + L Q QA +S + ++T T + +
Sbjct: 659 SQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQA-PISNQQAEVTPTGCLGKQTDQGS 717
Query: 444 VNFRSLGDGLS-TDKEGVPKSRESINKNRSVTVTSAKTSN-----------QLHCTLGVE 491
+ S D S T KE V R ++ +V + SN + + +
Sbjct: 718 MQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGLEKELSNAKEELELMAKKERESQMELS 777
Query: 492 ISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTD 534
++A +E+ L + +SL+ N + +DL + +Q + D
Sbjct: 778 ALQSMMAVQEEELQVQAADMESLTRNIQIKEDLIKDLQMQLVD 820
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
[Homo sapiens]
Length = 1132
Score = 33.9 bits (76), Expect = 0.45
Identities = 80/403 (19%), Positives = 158/403 (39%), Gaps = 37/403 (9%)
Query: 155 ENQNLSQVSDPQQHEEPGNEQY-EVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLE 213
+ QN+ ++ H+E +++ E+ Q + + D+ N ++ L + RQ+ K V LE
Sbjct: 595 QEQNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEAN--EMLLEKLRQRIHDKAVALE 652
Query: 214 ATM--KGNGLPQNV-DPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNA 270
+ K + L + + + ++ + + + QS+ +LL + G +
Sbjct: 653 RAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVE 712
Query: 271 NVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYS 330
+ +L ME + S+ E + + T + NKE S
Sbjct: 713 QLSTT-CQNLQWLKEEMETKFSRWQKEQESIIQQLQTS----------LHDRNKEVEDLS 761
Query: 331 SPSLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSE-EVICQS------E 383
+ LC E AEE C + + L +LL +K E+ E + + QS E
Sbjct: 762 ATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQVLEHEMEIQGLLQSVSTREQE 821
Query: 384 TIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREAVEN 443
+ A + ++ L ER ++ + L Q QA +S + ++T T + +
Sbjct: 822 SQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQA-PISNQQAEVTPTGCLGKQTDQGS 880
Query: 444 VNFRSLGDGLS-TDKEGVPKSRESINKNRSVTVTSAKTSN-----------QLHCTLGVE 491
+ S D S T KE V R ++ +V + SN + + +
Sbjct: 881 MQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGLEKELSNAKEELELMAKKERESQMELS 940
Query: 492 ISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTD 534
++A +E+ L + +SL+ N + +DL + +Q + D
Sbjct: 941 ALQSMMAVQEEELQVQAADMESLTRNIQIKEDLIKDLQMQLVD 983
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
[Homo sapiens]
Length = 2346
Score = 33.9 bits (76), Expect = 0.45
Identities = 80/403 (19%), Positives = 158/403 (39%), Gaps = 37/403 (9%)
Query: 155 ENQNLSQVSDPQQHEEPGNEQY-EVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLE 213
+ QN+ ++ H+E +++ E+ Q + + D+ N ++ L + RQ+ K V LE
Sbjct: 432 QEQNIQHLNHSLSHKEQLLQEFRELLQYRDNSDKTLEAN--EMLLEKLRQRIHDKAVALE 489
Query: 214 ATM--KGNGLPQNV-DPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNA 270
+ K + L + + + ++ + + + QS+ +LL + G +
Sbjct: 490 RAIDEKFSALEEKEKELRQLRLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVE 549
Query: 271 NVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYS 330
+ +L ME + S+ E + + T + NKE S
Sbjct: 550 QLSTT-CQNLQWLKEEMETKFSRWQKEQESIIQQLQTS----------LHDRNKEVEDLS 598
Query: 331 SPSLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSE-EVICQS------E 383
+ LC E AEE C + + L +LL +K E+ E + + QS E
Sbjct: 599 ATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRNKQVLEHEMEIQGLLQSVSTREQE 658
Query: 384 TIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREAVEN 443
+ A + ++ L ER ++ + L Q QA +S + ++T T + +
Sbjct: 659 SQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQA-PISNQQAEVTPTGCLGKQTDQGS 717
Query: 444 VNFRSLGDGLS-TDKEGVPKSRESINKNRSVTVTSAKTSN-----------QLHCTLGVE 491
+ S D S T KE V R ++ +V + SN + + +
Sbjct: 718 MQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGLEKELSNAKEELELMAKKERESQMELS 777
Query: 492 ISPKLLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQNSVTD 534
++A +E+ L + +SL+ N + +DL + +Q + D
Sbjct: 778 ALQSMMAVQEEELQVQAADMESLTRNIQIKEDLIKDLQMQLVD 820
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 33.5 bits (75), Expect = 0.59
Identities = 85/429 (19%), Positives = 155/429 (36%), Gaps = 66/429 (15%)
Query: 17 SGQSPDV------------GNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASAEFQL 64
SG PDV G A SV+ + + EP ++ ++S E +
Sbjct: 1494 SGGEPDVFPTVPFHEEFESGTAKKGAESVTERDTEVGHQAHEHTEPVSLFPEESSGEIAI 1553
Query: 65 NSEKKE-------HLSLQDLSDHASSADHAPTD-QSPAMPMQNSSEEITVAGNLEKSAER 116
+ E ++ ++ + + ++S + PT S A + E +T+ GN
Sbjct: 1554 DQESQKIAFARATEVTFGEEVEKSTSVTYTPTIVPSSASAYVSEEEAVTLIGNPWPDDLL 1613
Query: 117 STQGLKFHLHTRQEASLSVTST----------RMHEPQMFLGEKDWHPENQ-------NL 159
ST+ RQ LS +S+ E MF D N +
Sbjct: 1614 STKESWVEATPRQVVELSGSSSIPITEGSGEAEEDEDTMFTMVTDLSQRNTTDTLITLDT 1673
Query: 160 SQVSDPQQHEEPGNEQYEVAQQKASH--------DQEYLCNIGDLELPEERQQNQHKIVD 211
S++ E P Y V++Q ++ + + I + E++++ +
Sbjct: 1674 SRIITESFFEVPATTIYPVSEQPSAKVVPTKFVSETDTSEWISSTTVEEKKRKEEEGTTG 1733
Query: 212 LEATMKGNGLPQNVDPPSAKKSIPSSECSGCSNSET---FMEIDTAQQSLVTLLNSTG-- 266
+T + Q D + S + S+S T FM + T QS + +ST
Sbjct: 1734 TASTFEVYSSTQRSDQLILPFELESPNVATSSDSGTRKSFMSLTTPTQSEREMTDSTPVF 1793
Query: 267 RQNANVKNIGALDL---TLDNPLME--VETSKCNPSSEILNDSISTQDLQPPETNVEIPG 321
+ ++N+GA ++ P ++ + T +P+S + P T V
Sbjct: 1794 TETNTLENLGAQTTEHSSIHQPGVQEGLTTLPRSPASVFMEQGSGEAAADPETTTVSSFS 1853
Query: 322 TNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELHELLVVSSKPASEN---TSEEV 378
N EY + + G+ P VE+ + P+ L V + +EN TS E+
Sbjct: 1854 LNVEYAIQAEKEVAGTLSPHVETTFSTEPTGLV-------LSTVMDRVVAENITQTSREI 1906
Query: 379 ICQSETIAE 387
+ SE + E
Sbjct: 1907 VI-SERLGE 1914
>gi|7706589 GNAS complex locus NESP55 [Homo sapiens]
Length = 245
Score = 33.5 bits (75), Expect = 0.59
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 13/148 (8%)
Query: 35 ASVCPIKP-SDSDR------IEPKAVKALKASAEFQLNSEKKEHLSLQDLSDHASSADHA 87
A V P P S+SD +E + L+ EF +E + ++ +D + + A
Sbjct: 73 AQVFPESPESESDHEHEEADLELSLPECLEYEEEFDYETESETESEIESETDFETEPETA 132
Query: 88 PTDQSPAMPMQNSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFL 147
PT + P + + +S + LK +AS S EPQ
Sbjct: 133 PTTEPETEPEDDRGPVVPKHSTFGQSLTQRLHALKLR---SPDASPSRAPPSTQEPQSPR 189
Query: 148 GEKDWHPENQNLSQVSDPQQHEEPGNEQ 175
++ PE+++ DP++ +EP E+
Sbjct: 190 EGEELKPEDKD---PRDPEESKEPKEEK 214
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 33.5 bits (75), Expect = 0.59
Identities = 65/307 (21%), Positives = 113/307 (36%), Gaps = 27/307 (8%)
Query: 280 LTLDNP--LMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGS 337
LT +P L T PSS+ + ST L P P ++P+L S
Sbjct: 10 LTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPS 69
Query: 338 CQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSE 397
P++ + S P++T +L SS P +S + S T ++ L+
Sbjct: 70 STPTLTPS--STPTLTP-----QPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP 122
Query: 398 RWTQNEHLTQNEQCPQVSFHQAISVSVETEK-LTGTSSDTGREAVENVNFRSLGDGLSTD 456
N P ++ +++ + LT +S+ T + + RS L+
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLT-- 177
Query: 457 KEGVPKSRESINKNRSVTVTSAKTSNQLHCTLGV---EISPKLLAGEEDALNQTSEQTKS 513
P S ++ + + T+T + T + + +P L L +S T +
Sbjct: 178 ----PSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLT 233
Query: 514 LSSNFILVKDLGQGIQNSVTDR--PETRENVCPDASRPLLEYEPPTSHPSSSPAILP--- 568
SS IL + + S T P + P + L PT PSS+P + P
Sbjct: 234 PSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Query: 569 PLIFPAT 575
P + P++
Sbjct: 294 PTLTPSS 300
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 33.5 bits (75), Expect = 0.59
Identities = 65/307 (21%), Positives = 113/307 (36%), Gaps = 27/307 (8%)
Query: 280 LTLDNP--LMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGS 337
LT +P L T PSS+ + ST L P P ++P+L S
Sbjct: 10 LTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPS 69
Query: 338 CQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSE 397
P++ + S P++T +L SS P +S + S T ++ L+
Sbjct: 70 STPTLTPS--STPTLTP-----QPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP 122
Query: 398 RWTQNEHLTQNEQCPQVSFHQAISVSVETEK-LTGTSSDTGREAVENVNFRSLGDGLSTD 456
N P ++ +++ + LT +S+ T + + RS L+
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLT-- 177
Query: 457 KEGVPKSRESINKNRSVTVTSAKTSNQLHCTLGV---EISPKLLAGEEDALNQTSEQTKS 513
P S ++ + + T+T + T + + +P L L +S T +
Sbjct: 178 ----PSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLT 233
Query: 514 LSSNFILVKDLGQGIQNSVTDR--PETRENVCPDASRPLLEYEPPTSHPSSSPAILP--- 568
SS IL + + S T P + P + L PT PSS+P + P
Sbjct: 234 PSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Query: 569 PLIFPAT 575
P + P++
Sbjct: 294 PTLTPSS 300
>gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens]
Length = 1332
Score = 33.5 bits (75), Expect = 0.59
Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 10/166 (6%)
Query: 37 VCPIKPSDSDRIEPKAVKALKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMP 96
+CP+ S D I KA + L+ S + Q N +KE + + L ++ ++ A
Sbjct: 803 ICPLLYSTDDAICSKANELLQRSRQVQ-NKTEKERMLRESLKEYQKISNQVDLSNVCAQY 861
Query: 97 MQNSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQM----FLGEKDW 152
Q E V +L + ++ QGL H + E + + + ++ + +
Sbjct: 862 RQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQ 921
Query: 153 HPENQNLSQVSDPQQHEEPG-----NEQYEVAQQKASHDQEYLCNI 193
NQ+ + P ++PG ++ ++ ++A H E + +
Sbjct: 922 ELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKL 967
>gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens]
Length = 1391
Score = 33.5 bits (75), Expect = 0.59
Identities = 32/166 (19%), Positives = 68/166 (40%), Gaps = 10/166 (6%)
Query: 37 VCPIKPSDSDRIEPKAVKALKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMP 96
+CP+ S D I KA + L+ S + Q N +KE + + L ++ ++ A
Sbjct: 862 ICPLLYSTDDAICSKANELLQRSRQVQ-NKTEKERMLRESLKEYQKISNQVDLSNVCAQY 920
Query: 97 MQNSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQM----FLGEKDW 152
Q E V +L + ++ QGL H + E + + + ++ + +
Sbjct: 921 RQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQ 980
Query: 153 HPENQNLSQVSDPQQHEEPG-----NEQYEVAQQKASHDQEYLCNI 193
NQ+ + P ++PG ++ ++ ++A H E + +
Sbjct: 981 ELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKL 1026
>gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Homo
sapiens]
Length = 1366
Score = 33.5 bits (75), Expect = 0.59
Identities = 73/346 (21%), Positives = 126/346 (36%), Gaps = 50/346 (14%)
Query: 200 EERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECSGC-SNSETFMEIDTAQQSL 258
E RQ +Q E+T K + +DP + K+ S C ++S++ + + Q
Sbjct: 188 ENRQTDQFSFSINESTEKDMNSEKQMDPLNRPKTEGRSVNHLCPTSSDSLASVCSPSQ-- 245
Query: 259 VTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKC---NPSSEILNDSISTQDLQPPET 315
L G + LT+D+ + T C + D T + P T
Sbjct: 246 ---LKDDGSIGRDPSMSAITSLTVDSVISSQGTDGCPAVKKQENYIPDEDLTGKISSPRT 302
Query: 316 NVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAAL---------------KELH 360
++ G+ + H S L + EES S L +
Sbjct: 303 DL---GSPNSFSHMSEGILMKKEPAEESTTEESLRSGLPLLLKPDMPNGSGRNNDCERCS 359
Query: 361 ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI 420
+ LV + A EN E ET+ G T +++E +++++ +T N + +++
Sbjct: 360 DCLVPNEVRADENEGYE---HEETL--GTTEFLNMTEHFSESQDMT-NWKLTKLNEMNDS 413
Query: 421 SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSV---TVTS 477
V+ E EK S E+ N S G + G+ I+++ TV
Sbjct: 414 QVNEEKEKFLQISQP------EDTNGDSGGQCVGLADAGLDLKGTCISESEECDFSTVID 467
Query: 478 AKTSNQLH--CTL------GVEISPKLLAGEEDALNQTSEQTKSLS 515
+N L C GV PK L +ED++ + E +S S
Sbjct: 468 TPAANYLSNGCDSYGMQDPGVSFVPKTLPSKEDSVTEEKEIEESKS 513
>gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Homo
sapiens]
Length = 1425
Score = 33.5 bits (75), Expect = 0.59
Identities = 73/346 (21%), Positives = 126/346 (36%), Gaps = 50/346 (14%)
Query: 200 EERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECSGC-SNSETFMEIDTAQQSL 258
E RQ +Q E+T K + +DP + K+ S C ++S++ + + Q
Sbjct: 188 ENRQTDQFSFSINESTEKDMNSEKQMDPLNRPKTEGRSVNHLCPTSSDSLASVCSPSQ-- 245
Query: 259 VTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKC---NPSSEILNDSISTQDLQPPET 315
L G + LT+D+ + T C + D T + P T
Sbjct: 246 ---LKDDGSIGRDPSMSAITSLTVDSVISSQGTDGCPAVKKQENYIPDEDLTGKISSPRT 302
Query: 316 NVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAAL---------------KELH 360
++ G+ + H S L + EES S L +
Sbjct: 303 DL---GSPNSFSHMSEGILMKKEPAEESTTEESLRSGLPLLLKPDMPNGSGRNNDCERCS 359
Query: 361 ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI 420
+ LV + A EN E ET+ G T +++E +++++ +T N + +++
Sbjct: 360 DCLVPNEVRADENEGYE---HEETL--GTTEFLNMTEHFSESQDMT-NWKLTKLNEMNDS 413
Query: 421 SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSV---TVTS 477
V+ E EK S E+ N S G + G+ I+++ TV
Sbjct: 414 QVNEEKEKFLQISQP------EDTNGDSGGQCVGLADAGLDLKGTCISESEECDFSTVID 467
Query: 478 AKTSNQLH--CTL------GVEISPKLLAGEEDALNQTSEQTKSLS 515
+N L C GV PK L +ED++ + E +S S
Sbjct: 468 TPAANYLSNGCDSYGMQDPGVSFVPKTLPSKEDSVTEEKEIEESKS 513
>gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo
sapiens]
Length = 762
Score = 33.5 bits (75), Expect = 0.59
Identities = 73/346 (21%), Positives = 126/346 (36%), Gaps = 50/346 (14%)
Query: 200 EERQQNQHKIVDLEATMKGNGLPQNVDPPSAKKSIPSSECSGC-SNSETFMEIDTAQQSL 258
E RQ +Q E+T K + +DP + K+ S C ++S++ + + Q
Sbjct: 188 ENRQTDQFSFSINESTEKDMNSEKQMDPLNRPKTEGRSVNHLCPTSSDSLASVCSPSQ-- 245
Query: 259 VTLLNSTGRQNANVKNIGALDLTLDNPLMEVETSKC---NPSSEILNDSISTQDLQPPET 315
L G + LT+D+ + T C + D T + P T
Sbjct: 246 ---LKDDGSIGRDPSMSAITSLTVDSVISSQGTDGCPAVKKQENYIPDEDLTGKISSPRT 302
Query: 316 NVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAAL---------------KELH 360
++ G+ + H S L + EES S L +
Sbjct: 303 DL---GSPNSFSHMSEGILMKKEPAEESTTEESLRSGLPLLLKPDMPNGSGRNNDCERCS 359
Query: 361 ELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQVSFHQAI 420
+ LV + A EN E ET+ G T +++E +++++ +T N + +++
Sbjct: 360 DCLVPNEVRADENEGYE---HEETL--GTTEFLNMTEHFSESQDMT-NWKLTKLNEMNDS 413
Query: 421 SVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSV---TVTS 477
V+ E EK S E+ N S G + G+ I+++ TV
Sbjct: 414 QVNEEKEKFLQISQP------EDTNGDSGGQCVGLADAGLDLKGTCISESEECDFSTVID 467
Query: 478 AKTSNQLH--CTL------GVEISPKLLAGEEDALNQTSEQTKSLS 515
+N L C GV PK L +ED++ + E +S S
Sbjct: 468 TPAANYLSNGCDSYGMQDPGVSFVPKTLPSKEDSVTEEKEIEESKS 513
>gi|190194429 zinc finger protein 267 [Homo sapiens]
Length = 743
Score = 33.5 bits (75), Expect = 0.59
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 99 NSSEEITVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPEN-- 156
N EEI + G K H++ + ST +F+GEK++H N
Sbjct: 176 NQQEEIDIWG-------------KHHIYDKTSVLFRQVSTLNSYRNVFIGEKNYHCNNSE 222
Query: 157 QNLSQVSDPQQHEEP-------GNEQYEVAQQKASHDQE-----YLCN 192
+ L+Q S P+ H+E +++E ++ H QE Y CN
Sbjct: 223 KTLNQSSSPKNHQENYFLEKQYKCKEFEEVFLQSMHGQEKQEQSYKCN 270
>gi|46852172 kinesin family member 13B [Homo sapiens]
Length = 1826
Score = 33.5 bits (75), Expect = 0.59
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 71 HLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEITVAGNLEKSAERSTQGLKFHLHTRQE 130
H +L A+ DQ P+M +NSSE++ V G + S+E S+ E
Sbjct: 538 HFFRLNLPKKKKKAEREDEDQDPSMKNENSSEQLDVDG--DSSSEVSS-----------E 584
Query: 131 ASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQHEEPGNEQYEVAQQKASHDQEYL 190
+ + +M LG D P L+ + QQHEE E + H+ E L
Sbjct: 585 VNFNYEYAQMEVTMKALGSND--PMQSILNSLE--QQHEEEKRSALERQRLMYEHELEQL 640
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.1 bits (74), Expect = 0.78
Identities = 72/345 (20%), Positives = 130/345 (37%), Gaps = 35/345 (10%)
Query: 219 NGLPQNVDPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIG-- 276
+G+P PPS + S S +++ T ++ TL S G +
Sbjct: 11616 SGVPTTTIPPSIPGVVTSQVTSSATDTST---------AIPTLTPSPGEPETTASSATHP 11666
Query: 277 ALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCG 336
P+ V PSSE D++++ PP+T+ + T + H SSP
Sbjct: 11667 GTQTGFTVPIRTV------PSSE--PDTMASWVTHPPQTSTPVSRTTSSFSH-SSPDATP 11717
Query: 337 --SCQPSVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKD 394
+ P E++ +I+ E+ + SS A+ +T+ + S + E T++
Sbjct: 11718 VMATSPRTEASSAVLTTISPGAPEMVTSQITSS-GAATSTTVPTLTHSPGMPE-TTALLS 11775
Query: 395 LSERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREA---VENVNFRSLGD 451
R ++ + PQVS S+++ T T+ T + V S D
Sbjct: 11776 THPRTETSKTFPASTVFPQVS-ETTASLTIRPGAETSTALPTQTTSSLFTLLVTGTSRVD 11834
Query: 452 GLSTDKEGVPKSRESINKNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQTSEQT 511
T GV ++ + ++ ++ L +LG+ + LLA A TS T
Sbjct: 11835 LSPTASPGVSAKTAPLSTHPGTETSTMIPTSTL--SLGLLETTGLLATSSSAETSTSTLT 11892
Query: 512 KSLSSNFILVKDLGQGIQNSVTDRPETRENVCPDASRPLLEYEPP 556
++S G + TD+P+T + + S + PP
Sbjct: 11893 LTVSPAV-----SGLSSASITTDKPQTVTSWNTETSPSVTSVGPP 11932
Score = 31.2 bits (69), Expect = 2.9
Identities = 70/311 (22%), Positives = 117/311 (37%), Gaps = 33/311 (10%)
Query: 272 VKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSS 331
VK L+ +++ P+ + NPS+EIL +T D++ ++ TN G SS
Sbjct: 4491 VKTTDMLNTSME-PVTNSPQNLNNPSNEILATLAATTDIETIHPSINKAVTN--MGTASS 4547
Query: 332 PSLCGSCQP-SVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQT 390
+ S P S E + + P + A+ + + L S P SE T E E +
Sbjct: 4548 AHVLHSTLPVSSEPSTATSPMVPAS--SMGDALASISIPGSETTDIE----GEPTSSLTA 4601
Query: 391 SIKDLSERWTQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTG--REAVENVNFRS 448
K+ S N N VS + E K+ S D ++ F
Sbjct: 4602 GRKENSTLQEMNSTTESNIILSNVS----VGAITEATKMEVPSFDATFIPTPAQSTKFPD 4657
Query: 449 LGDGLSTDKEGVPKSRESINKNRSVTVTSAKTSNQLHCTLGVEISP-KLLAGEEDALNQT 507
+ S+ P S + + T +S TS L ++ S + AG + +
Sbjct: 4658 IFSVASSRLSNSPPMTISTHMTTTQTGSSGATSK---IPLALDTSTLETSAGTPSVVTEG 4714
Query: 508 SEQTKSLSSNFILVKDLGQGIQNSVTDRPETRENVCPDASRPLLEYEPPTS-------HP 560
+K ++ VKD+ Q T+ P E P + P+L P+S H
Sbjct: 4715 FAHSKITTAMNNDVKDVSQ------TNPPFQDEASSPSSQAPVLVTTLPSSVAFTPQWHS 4768
Query: 561 SSSPAILPPLI 571
+SSP + ++
Sbjct: 4769 TSSPVSMSSVL 4779
Score = 30.4 bits (67), Expect = 5.0
Identities = 21/89 (23%), Positives = 37/89 (41%)
Query: 303 DSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPSITAALKELHEL 362
++ + Q + P ETN +P T ++ H S + S S S T ++ +L
Sbjct: 11486 ETTAIQLIHPAETNTMVPRTTPKFSHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDL 11545
Query: 363 LVVSSKPASENTSEEVICQSETIAEGQTS 391
+ + +TS SET E +T+
Sbjct: 11546 VTSLVPSSGTDTSTTFPTLSETPYEPETT 11574
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 33.1 bits (74), Expect = 0.78
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 56 LKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMP----MQNSSEEIT-VAGNL 110
LK + + +K SL L + A+ P + PA+P +Q+ +E+ VAG L
Sbjct: 266 LKKEKQQDMRRVEKLERSLSKLKNQM--AEPLPPEP-PAVPSEVELQHLRKELERVAGEL 322
Query: 111 EKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVSDPQQ-HE 169
+ ++ Q + L+ RQE + R+ + + + E ++++L Q++ PQ E
Sbjct: 323 QAQV-KNNQRISL-LNQRQEERIREQEERLRKQEERIQE-----QHKSLQQLAKPQSVFE 375
Query: 170 EPGNEQYEVAQ--QKASHDQEYLCNIGDLELPEERQQNQHKIVDL 212
EP NE Q Q+ QE +G+ L QQNQ L
Sbjct: 376 EPNNENKSTLQLEQQVKELQE---KLGEEHLEAASQQNQQLTAQL 417
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.123 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,925,271
Number of Sequences: 37866
Number of extensions: 1109071
Number of successful extensions: 4137
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 3981
Number of HSP's gapped (non-prelim): 224
length of query: 617
length of database: 18,247,518
effective HSP length: 108
effective length of query: 509
effective length of database: 14,157,990
effective search space: 7206416910
effective search space used: 7206416910
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.