Guide to the Human Genome
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Name: NUDT5 Sequence: fasta or formatted (219aa) NCBI GI: 37594464
Description:

nudix-type motif 5

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         17           3
 C cysteine            2.3          5           1
 D aspartate           5.5         12           2
 E glutamate          11.0         24           3
 F phenylalanine       2.7          6           1
 G glycine             6.4         14           2
 H histidine           1.8          4           1
 I isoleucine          5.5         12           2
 K lysine              6.8         15           1
 L leucine             8.2         18           2
 M methionine          1.8          4           1
 N asparagine          2.7          6           1
 P proline             6.8         15           2
 Q glutamine           3.2          7           1
 R arginine            4.1          9           1
 S serine              4.6         10           2
 T threonine           7.3         16           2
 V valine              7.3         16           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 5 
NUDT15                0.024   nudix-type motif 15 
NUDT12                0.019   nudix-type motif 12 
CSMD1                 0.012   CUB and Sushi multiple domains 1 
NUDT11                0.012   nudix-type motif 11 
NUDT4                 0.012   nudix-type motif 4 isoform alpha 
NUDT10                0.012   nudix-type motif 10 
NUDT4                 0.012   nudix-type motif 4 isoform beta 
ZNF41                 0.010   zinc finger protein 41 
DCP2                  0.010   DCP2 decapping enzyme 
ZNF41                 0.010   zinc finger protein 41 
NUDT3                 0.010   nudix-type motif 3 
LOC100288860          0.007   PREDICTED: hypothetical protein XP_002343712 
NUDT1                 0.007   nudix-type motif 1 isoform p22 
NUDT1                 0.007   nudix-type motif 1 isoform p18 
NUDT1                 0.007   nudix-type motif 1 isoform p22 
NUDT1                 0.007   nudix-type motif 1 isoform p18 
NUDT1                 0.007   nudix-type motif 1 isoform p22 
NUDT1                 0.007   nudix-type motif 1 isoform p18 
NUDT1                 0.007   nudix-type motif 1 isoform p18 
ZNF253                0.007   zinc finger protein 253 
ODZ3                  0.007   odz, odd Oz/ten-m homolog 3 
ZNF56                 0.007   PREDICTED: zinc finger protein 56 
ZNF56                 0.007   PREDICTED: zinc finger protein 56 
ZNF630                0.007   zinc finger protein 630 
KIF24                 0.007   kinesin family member 24 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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