CLN5 33331

Name: CLN5	Sequence: fasta or formatted (407aa)		NCBI GI: 5729772
Description: ceroid-lipofuscinosis, neuronal 5		Referenced in: Lysosomes and Related Organelles
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 31 2 C cysteine 2.0 8 1 D aspartate 3.9 16 3 E glutamate 5.7 23 2 F phenylalanine 7.1 29 2 G glycine 8.4 34 1 H histidine 1.7 7 1 I isoleucine 4.2 17 1 K lysine 5.4 22 1 L leucine 8.6 35 2 M methionine 2.7 11 1 N asparagine 3.9 16 1 P proline 7.4 30 2 Q glutamine 3.4 14 1 R arginine 5.4 22 2 S serine 5.2 21 2 T threonine 5.7 23 1 V valine 4.2 17 2 W tryptophan 3.2 13 1 Y tyrosine 4.4 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ceroid-lipofuscinosis, neuronal 5 CHCHD2 0.013 coiled-coil-helix-coiled-coil-helix domain containing... PGR 0.012 progesterone receptor LOC645317 0.012 PREDICTED: similar to coiled-coil-helix-coiled-coil... LOC645317 0.012 PREDICTED: similar to coiled-coil-helix-coiled-coil... LOC645317 0.012 PREDICTED: similar to coiled-coil-helix-coiled-coil... PHOX2B 0.008 paired-like homeobox 2b DGKI 0.008 diacylglycerol kinase, iota PHACTR4 0.008 phosphatase and actin regulator 4 isoform 2 PHACTR4 0.008 phosphatase and actin regulator 4 isoform 1 KIAA1602 0.008 hypothetical protein LOC57701 ITGA7 0.007 integrin alpha 7 isoform 1 precursor ITGA7 0.007 integrin alpha 7 isoform 2 precursor LOC100128398 0.007 PREDICTED: hypothetical protein LOC100128398 0.007 PREDICTED: hypothetical protein LOC100290783 0.007 PREDICTED: hypothetical protein XP_002347614 LOC100290675 0.007 PREDICTED: hypothetical protein XP_002346495 LOC100128398 0.007 PREDICTED: hypothetical protein LOC100288864 0.007 PREDICTED: hypothetical protein XP_002343435 STRA6 0.007 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.007 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.007 stimulated by retinoic acid gene 6 homolog isoform ... STRA6 0.007 stimulated by retinoic acid gene 6 homolog isoform ... LOC100291672 0.006 PREDICTED: hypothetical protein XP_002345662 LOC100287387 0.006 PREDICTED: hypothetical protein XP_002342351 KRBA1 0.006 KRAB A domain containing 1 KLF16 0.006 BTE-binding protein 4 CD109 0.006 CD109 antigen isoform 3 precursor FAM134B 0.006 hypothetical protein LOC54463 isoform 1 LOC100293294 0.005 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.