BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|5729770 tripeptidyl-peptidase I preproprotein [Homo sapiens] (563 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|5729770 tripeptidyl-peptidase I preproprotein [Homo sapiens] 1157 0.0 gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] 37 0.048 gi|190194389 UDP glucuronosyltransferase 2B7 [Homo sapiens] 35 0.18 gi|4507821 UDP glucuronosyltransferase 2 family, polypeptide B17... 33 0.53 gi|116517299 UDP glycosyltransferase 2B15 [Homo sapiens] 33 0.53 gi|16596680 UDP glucuronosyltransferase 2 family, polypeptide B2... 33 0.70 gi|38373671 SEC24-related protein C [Homo sapiens] 33 0.91 gi|38373669 SEC24-related protein C [Homo sapiens] 33 0.91 gi|239757043 PREDICTED: functional smad suppressing element 18 [... 32 1.2 gi|239751555 PREDICTED: functional smad suppressing element 18 [... 32 1.2 gi|239746067 PREDICTED: functional smad suppressing element 18 [... 32 1.2 gi|4507823 UDP glucuronosyltransferase 2 family, polypeptide B11... 32 1.6 gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo ... 32 1.6 gi|203098098 shroom family member 3 protein [Homo sapiens] 32 2.0 gi|149944509 UDP glucuronosyltransferase 2B4 [Homo sapiens] 32 2.0 gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens] 32 2.0 gi|239757291 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6 gi|193211427 UDP glucuronosyltransferase 2 family, polypeptide A... 31 2.6 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 31 2.6 gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A... 30 4.5 gi|157787091 UDP glucuronosyltransferase 2 family, polypeptide A... 30 4.5 gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 30 5.9 gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 30 5.9 gi|7524361 paired box 8 isoform PAX8B [Homo sapiens] 30 5.9 gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] 30 5.9 gi|4502175 apical protein of Xenopus-like [Homo sapiens] 30 5.9 gi|221219059 UDP glucuronosyltransferase 2B10 isoform 2 [Homo sa... 30 7.7 gi|4507817 UDP glucuronosyltransferase 2B10 isoform 1 [Homo sapi... 30 7.7 gi|46409306 family with sequence similarity 43, member B [Homo s... 30 7.7 >gi|5729770 tripeptidyl-peptidase I preproprotein [Homo sapiens] Length = 563 Score = 1157 bits (2993), Expect = 0.0 Identities = 563/563 (100%), Positives = 563/563 (100%) Query: 1 MGLQACLLGLFALILSGKCSYSPEPDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVER 60 MGLQACLLGLFALILSGKCSYSPEPDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVER Sbjct: 1 MGLQACLLGLFALILSGKCSYSPEPDQRRTLPPGWVSLGRADPEEELSLTFALRQQNVER 60 Query: 61 LSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTVQKWLLAAGAQKCHSVITQDFL 120 LSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTVQKWLLAAGAQKCHSVITQDFL Sbjct: 61 LSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTVQKWLLAAGAQKCHSVITQDFL 120 Query: 121 TCWLSIRQAELLLPGAEFHHYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTS 180 TCWLSIRQAELLLPGAEFHHYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTS Sbjct: 121 TCWLSIRQAELLLPGAEFHHYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTS 180 Query: 181 SLRQRPEPQVTGTVGLHLGVTPSVIRKRYNLTSQDVGSGTSNNSQACAQFLEQYFHDSDL 240 SLRQRPEPQVTGTVGLHLGVTPSVIRKRYNLTSQDVGSGTSNNSQACAQFLEQYFHDSDL Sbjct: 181 SLRQRPEPQVTGTVGLHLGVTPSVIRKRYNLTSQDVGSGTSNNSQACAQFLEQYFHDSDL 240 Query: 241 AQFMRLFGGNFAHQASVARVVGQQGRGRAGIEASLDVQYLMSAGANISTWVYSSPGRHEG 300 AQFMRLFGGNFAHQASVARVVGQQGRGRAGIEASLDVQYLMSAGANISTWVYSSPGRHEG Sbjct: 241 AQFMRLFGGNFAHQASVARVVGQQGRGRAGIEASLDVQYLMSAGANISTWVYSSPGRHEG 300 Query: 301 QEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 360 QEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD Sbjct: 301 QEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 360 Query: 361 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPS 420 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPS Sbjct: 361 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPS 420 Query: 421 YQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNRVPIPWVSGTSASTPV 480 YQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNRVPIPWVSGTSASTPV Sbjct: 421 YQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNRVPIPWVSGTSASTPV 480 Query: 481 FGGILSLINEHRILSGRPPLGFLNPRLYQQHGAGLFDVTRGCHESCLDEEVEGQGFCSGP 540 FGGILSLINEHRILSGRPPLGFLNPRLYQQHGAGLFDVTRGCHESCLDEEVEGQGFCSGP Sbjct: 481 FGGILSLINEHRILSGRPPLGFLNPRLYQQHGAGLFDVTRGCHESCLDEEVEGQGFCSGP 540 Query: 541 GWDPVTGWGTPNFPALLKTLLNP 563 GWDPVTGWGTPNFPALLKTLLNP Sbjct: 541 GWDPVTGWGTPNFPALLKTLLNP 563 >gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] Length = 1028 Score = 37.0 bits (84), Expect = 0.048 Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 10/137 (7%) Query: 292 YSSPGRHEGQEPFLQWLMLLSNESALPH-VHTVSYGDDEDSLSSA--YIQRVNTELMKAA 348 YS G+ + LQ+L N +AL V + + +D ++ A Y+ R E A Sbjct: 878 YSGTGQQRPERASLQFLQ---NYTALASAVDAMDFINDATDVNDALGYVTRFYREASSGA 934 Query: 349 ARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQEPF---LITNEIVD 405 A+ LLF+ G+S G + + A V G EP L+T + + Sbjct: 935 AKKRLLLFSDGNS-QGATPAAIEKAVQEAQRAGIEIFVVVVGRQVNEPHIRVLVTGKTAE 993 Query: 406 YISGGGFSNVFPRPSYQ 422 Y G S++F PSYQ Sbjct: 994 YDVAYGESHLFRVPSYQ 1010 >gi|190194389 UDP glucuronosyltransferase 2B7 [Homo sapiens] Length = 529 Score = 35.0 bits (79), Expect = 0.18 Identities = 15/34 (44%), Positives = 21/34 (61%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFP 177 G + ++R+ +Q P L P+VDFVGGLH P Sbjct: 251 GKADVWLIRNSWNFQFPYPLLPNVDFVGGLHCKP 284 >gi|4507821 UDP glucuronosyltransferase 2 family, polypeptide B17 [Homo sapiens] Length = 530 Score = 33.5 bits (75), Expect = 0.53 Identities = 14/34 (41%), Positives = 21/34 (61%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFP 177 G E ++R+ ++ P+ P+VDFVGGLH P Sbjct: 252 GKAEMWLIRTYWDFEFPRPFLPNVDFVGGLHCKP 285 >gi|116517299 UDP glycosyltransferase 2B15 [Homo sapiens] Length = 530 Score = 33.5 bits (75), Expect = 0.53 Identities = 14/34 (41%), Positives = 21/34 (61%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFP 177 G E ++R+ ++ P+ P+VDFVGGLH P Sbjct: 252 GKAEMWLIRTYWDFEFPRPFLPNVDFVGGLHCKP 285 >gi|16596680 UDP glucuronosyltransferase 2 family, polypeptide B28 [Homo sapiens] Length = 529 Score = 33.1 bits (74), Expect = 0.70 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRPE-PQVTGTVGLHLGVTP 202 G + ++R+ +Q P P++DFVGGLH P ++ E Q +G G+ + Sbjct: 251 GKADIWLMRNSWSFQFPHPFLPNIDFVGGLHCKPAKPLPKEMEEFVQSSGENGVVVFSLG 310 Query: 203 SVIRKRYNLTSQ 214 SVI N+T++ Sbjct: 311 SVIS---NMTAE 319 >gi|38373671 SEC24-related protein C [Homo sapiens] Length = 1094 Score = 32.7 bits (73), Expect = 0.91 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 132 LLPGAEFHHYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRP-EPQV 190 LLPG F GGP+ V + H PQAL P G L PP S +Q +PQ Sbjct: 230 LLPGQSF----GGPS---VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQ 282 Query: 191 TGTVG 195 G+ G Sbjct: 283 NGSFG 287 >gi|38373669 SEC24-related protein C [Homo sapiens] Length = 1094 Score = 32.7 bits (73), Expect = 0.91 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Query: 132 LLPGAEFHHYVGGPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRP-EPQV 190 LLPG F GGP+ V + H PQAL P G L PP S +Q +PQ Sbjct: 230 LLPGQSF----GGPS---VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQ 282 Query: 191 TGTVG 195 G+ G Sbjct: 283 NGSFG 287 >gi|239757043 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 996 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 311 LSNESALPHVH--TVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSV 368 L+ + PH H + DD+DSL A + V + AAA L++ ASG +G G Sbjct: 295 LAELAGAPHAHHKRPRFDDDDDSLQEAAV--VAAASLSAAAASLSVAAASGGAGTGGGGA 352 Query: 369 SG 370 G Sbjct: 353 GG 354 >gi|239751555 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 1252 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 311 LSNESALPHVH--TVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSV 368 L+ + PH H + DD+DSL A + V + AAA L++ ASG +G G Sbjct: 295 LAELAGAPHAHHKRPRFDDDDDSLQEAAV--VAAASLSAAAASLSVAAASGGAGTGGGGA 352 Query: 369 SG 370 G Sbjct: 353 GG 354 >gi|239746067 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 1252 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 311 LSNESALPHVH--TVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSV 368 L+ + PH H + DD+DSL A + V + AAA L++ ASG +G G Sbjct: 295 LAELAGAPHAHHKRPRFDDDDDSLQEAAV--VAAASLSAAAASLSVAAASGGAGTGGGGA 352 Query: 369 SG 370 G Sbjct: 353 GG 354 >gi|4507823 UDP glucuronosyltransferase 2 family, polypeptide B11 [Homo sapiens] Length = 529 Score = 32.0 bits (71), Expect = 1.6 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRPE-PQVTGTVGLHLGVTP 202 G + ++R+ +Q P P+VDFVGG H P ++ E Q +G G+ + Sbjct: 251 GKADIWLMRNSWSFQFPHPFLPNVDFVGGFHCKPAKPLPKEMEEFVQSSGENGVVVFSLG 310 Query: 203 SVIRKRYNLTSQ 214 SVI N+T++ Sbjct: 311 SVIS---NMTAE 319 >gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo sapiens] Length = 630 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 42 DPEEELSLTFALRQQNVERLSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTVQK 101 DP + +L F +++N ERL + + +V G YL ++ D + P H + + Sbjct: 363 DPTDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDP---LAHPLLQ 419 Query: 102 WLLAA 106 W++++ Sbjct: 420 WIISS 424 >gi|203098098 shroom family member 3 protein [Homo sapiens] Length = 1996 Score = 31.6 bits (70), Expect = 2.0 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 10/132 (7%) Query: 133 LPGAEFHHYVGGPT-----ETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRPE 187 +PGA H VG T +T + S P ++ H G L P + Sbjct: 1585 MPGAA--HVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSH 1642 Query: 188 PQVTGTVGLHLGVTPSVIRKRYNLTSQDVGSGTSNNSQACAQFLEQYFHDSDLAQFMRLF 247 V+GT GL V+P + ++ ++ + + ++ A L+ DS L M L Sbjct: 1643 DPVSGTQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDP---DSRLKTTMDLM 1699 Query: 248 GGNFAHQASVAR 259 G F ++ + Sbjct: 1700 EGLFPRDVNLLK 1711 >gi|149944509 UDP glucuronosyltransferase 2B4 [Homo sapiens] Length = 528 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/28 (46%), Positives = 19/28 (67%) Query: 150 VVRSPHPYQLPQALAPHVDFVGGLHRFP 177 ++R+ +Q P L P+V+FVGGLH P Sbjct: 257 LIRNYWDFQFPHPLLPNVEFVGGLHCKP 284 >gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens] Length = 770 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/51 (35%), Positives = 29/51 (56%) Query: 46 ELSLTFALRQQNVERLSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTL 96 E++L L + N+ +++ELV AV DP P KY +E L++ S + L Sbjct: 329 EMALLPHLHEHNLVKVTELVDAVYDPYKPYQLKYGDMEESNLLIQMSAVPL 379 >gi|239757291 PREDICTED: hypothetical protein [Homo sapiens] Length = 159 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 3/29 (10%) Query: 529 EEVEGQGF---CSGPGWDPVTGWGTPNFP 554 EEVEG G CSGPGW P G P P Sbjct: 53 EEVEGYGAPMACSGPGWTPHIGHPHPGPP 81 >gi|193211427 UDP glucuronosyltransferase 2 family, polypeptide A3 [Homo sapiens] Length = 527 Score = 31.2 bits (69), Expect = 2.6 Identities = 13/34 (38%), Positives = 20/34 (58%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFP 177 G E ++R+ ++ PQ P+ +FVGGLH P Sbjct: 249 GKAEIWLIRTYWDFEFPQPYQPNFEFVGGLHCKP 282 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 31.2 bits (69), Expect = 2.6 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 11/124 (8%) Query: 61 LSELVQAVSDPSSPQYGKYLTLENVADLVRPSPLTLHTVQKWLLAAGAQKCHSVITQDFL 120 L V + PS+ +G + L + P+P L VQ W AA A + S + Sbjct: 67 LGSFVASGMGPSASSHGSPVPLPSDLSFRSPTPSNLPMVQLW--AAHAHEGFSHLPSGLY 124 Query: 121 TCWLSIRQAELLLPGAEFHHYVGGPTETHVVRSPHP----YQLPQALAPHVDFVGGLHRF 176 +L + E G+ +G P+ + P + LP A AP G LH Sbjct: 125 PSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKGQGPGGDGFYLPTAGAP-----GSLHSH 179 Query: 177 PPTS 180 P++ Sbjct: 180 APSA 183 >gi|110611919 UDP glucuronosyltransferase 2 family, polypeptide A1 [Homo sapiens] Length = 527 Score = 30.4 bits (67), Expect = 4.5 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRPE-PQVTGTVGLHLGVTP 202 G E ++R+ ++ P+ P+ +FVGGLH P ++ E Q +G G+ + Sbjct: 249 GKAEIWLIRTYWDFEFPRPYLPNFEFVGGLHCKPAKPLPKEMEEFIQSSGKNGVVVFSLG 308 Query: 203 SVIRKRYNLTSQDVGSGTSNNSQACAQFLEQY 234 S+++ NLT + S +Q + L +Y Sbjct: 309 SMVK---NLTEEKANLIASALAQIPQKVLWRY 337 >gi|157787091 UDP glucuronosyltransferase 2 family, polypeptide A2 [Homo sapiens] Length = 528 Score = 30.4 bits (67), Expect = 4.5 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 144 GPTETHVVRSPHPYQLPQALAPHVDFVGGLHRFPPTSSLRQRPE-PQVTGTVGLHLGVTP 202 G E ++R+ ++ P+ P+ +FVGGLH P ++ E Q +G G+ + Sbjct: 250 GKAEIWLIRTYWDFEFPRPYLPNFEFVGGLHCKPAKPLPKEMEEFIQSSGKNGVVVFSLG 309 Query: 203 SVIRKRYNLTSQDVGSGTSNNSQACAQFLEQY 234 S+++ NLT + S +Q + L +Y Sbjct: 310 SMVK---NLTEEKANLIASALAQIPQKVLWRY 338 >gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo sapiens] Length = 1726 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Query: 423 EEAVTKFLSSSPHLPP-SSYFNASGRAYPDVAALSDGYWVV---SNRVPIPWVSGTSAST 478 EE V +FL+ LPP SS+ ++S + P ++A + +V + P + G +S Sbjct: 1622 EEEVNRFLAQGQALPPTSSWQSSSASSQPRLSAAGSSHGLVRSDAGHWNAPCLGGKGSSE 1681 Query: 479 PVFGGI 484 ++GG+ Sbjct: 1682 LLWGGV 1687 >gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo sapiens] Length = 1690 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Query: 423 EEAVTKFLSSSPHLPP-SSYFNASGRAYPDVAALSDGYWVV---SNRVPIPWVSGTSAST 478 EE V +FL+ LPP SS+ ++S + P ++A + +V + P + G +S Sbjct: 1586 EEEVNRFLAQGQALPPTSSWQSSSASSQPRLSAAGSSHGLVRSDAGHWNAPCLGGKGSSE 1645 Query: 479 PVFGGI 484 ++GG+ Sbjct: 1646 LLWGGV 1651 >gi|7524361 paired box 8 isoform PAX8B [Homo sapiens] Length = 387 Score = 30.0 bits (66), Expect = 5.9 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 368 VSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPSYQEEAVT 427 V+GR PT P P++ T G S+ + SG + + P SY E Sbjct: 298 VAGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHT-PYSSYSE--AW 354 Query: 428 KFLSSSPHLPPSSYFNASGRAYPDVAA 454 +F +SS P Y + S + P A Sbjct: 355 RFPNSSLLSSPYYYSSTSRPSAPPTTA 381 >gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] Length = 450 Score = 30.0 bits (66), Expect = 5.9 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 368 VSGRHQFRPTFPASSPYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPSYQEEAVT 427 +SGR PT P P++ T G S+ + SG + + P SY E Sbjct: 361 LSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHT-PYSSYSE--AW 417 Query: 428 KFLSSSPHLPPSSYFNASGRAYPDVAA 454 +F +SS P Y + S + P A Sbjct: 418 RFPNSSLLSSPYYYSSTSRPSAPPTTA 444 >gi|4502175 apical protein of Xenopus-like [Homo sapiens] Length = 1616 Score = 30.0 bits (66), Expect = 5.9 Identities = 14/38 (36%), Positives = 18/38 (47%) Query: 165 PHVDFVGGLHRFPPTSSLRQRPEPQVTGTVGLHLGVTP 202 PH +GG RF L+ EP+ VGL G +P Sbjct: 743 PHPPRIGGRRRFTAEQKLKSYSEPEKMNEVGLTRGYSP 780 >gi|221219059 UDP glucuronosyltransferase 2B10 isoform 2 [Homo sapiens] Length = 444 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Query: 150 VVRSPHPYQLPQALAPHVDFVGGLHRFP 177 ++R+ ++ P P+VDFVGGLH P Sbjct: 172 LMRNSWNFKFPHPFLPNVDFVGGLHCKP 199 >gi|4507817 UDP glucuronosyltransferase 2B10 isoform 1 [Homo sapiens] Length = 528 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Query: 150 VVRSPHPYQLPQALAPHVDFVGGLHRFP 177 ++R+ ++ P P+VDFVGGLH P Sbjct: 256 LMRNSWNFKFPHPFLPNVDFVGGLHCKP 283 >gi|46409306 family with sequence similarity 43, member B [Homo sapiens] Length = 329 Score = 29.6 bits (65), Expect = 7.7 Identities = 13/33 (39%), Positives = 18/33 (54%) Query: 14 ILSGKCSYSPEPDQRRTLPPGWVSLGRADPEEE 46 +L+ KC+Y P P +R P S+ D EEE Sbjct: 239 LLNAKCAYRPPPSERSRGAPRLSSIQEEDEEEE 271 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,619,909 Number of Sequences: 37866 Number of extensions: 1248547 Number of successful extensions: 2738 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 2715 Number of HSP's gapped (non-prelim): 36 length of query: 563 length of database: 18,247,518 effective HSP length: 107 effective length of query: 456 effective length of database: 14,195,856 effective search space: 6473310336 effective search space used: 6473310336 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.