PAX8 35522

Name: PAX8	Sequence: fasta or formatted (387aa)		NCBI GI: 7524361
Description: paired box 8 isoform PAX8B		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [450aa] paired box 8 isoform PAX8A alt prot [398aa] paired box 8 isoform PAX8C alt prot [321aa] paired box 8 isoform PAX8D alt prot [287aa] paired box 8 isoform PAX8E
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 22 1 C cysteine 1.6 6 1 D aspartate 4.7 18 2 E glutamate 3.6 14 1 F phenylalanine 1.8 7 1 G glycine 8.8 34 2 H histidine 3.6 14 2 I isoleucine 4.4 17 2 K lysine 3.4 13 1 L leucine 7.8 30 2 M methionine 1.6 6 1 N asparagine 3.4 13 1 P proline 9.8 38 2 Q glutamine 4.1 16 2 R arginine 5.9 23 1 S serine 13.4 52 4 T threonine 6.2 24 2 V valine 5.4 21 2 W tryptophan 0.5 2 1 Y tyrosine 4.4 17 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired box 8 isoform PAX8B PAX8 0.875 paired box 8 isoform PAX8A PAX8 0.765 paired box 8 isoform PAX8C PAX8 0.660 paired box 8 isoform PAX8D PAX8 0.658 paired box 8 isoform PAX8E PAX2 0.609 paired box protein 2 isoform b PAX2 0.596 paired box protein 2 isoform a PAX2 0.583 paired box protein 2 isoform d PAX2 0.570 paired box protein 2 isoform e PAX5 0.560 paired box 5 PAX2 0.530 paired box protein 2 isoform c PAX6 0.256 paired box gene 6 isoform a PAX6 0.256 paired box gene 6 isoform a PAX6 0.244 paired box gene 6 isoform b PAX3 0.243 paired box 3 isoform PAX3i PAX7 0.242 paired box 7 isoform 2 PAX3 0.236 paired box 3 isoform PAX3g PAX3 0.236 paired box 3 isoform PAX3h PAX3 0.236 paired box 3 isoform PAX3e PAX3 0.236 paired box 3 isoform PAX3d PAX3 0.236 paired box 3 isoform PAX3 PAX7 0.235 paired box 7 isoform 1 PAX7 0.235 paired box 7 isoform 3 PAX1 0.219 paired box 1 PAX9 0.219 paired box 9 PAX3 0.216 paired box 3 isoform PAX3b PAX3 0.216 paired box 3 isoform PAX3a PAX4 0.181 paired box 4 ALX4 0.021 aristaless-like homeobox 4 IRX5 0.018 iroquois homeobox protein 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.