Guide to the Human Genome
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Name: ZNF816A Sequence: fasta or formatted (651aa) NCBI GI: 72384365
Description:

zinc finger protein 816A

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         25           1
 C cysteine            6.1         40           1
 D aspartate           2.3         15           1
 E glutamate           8.1         53           2
 F phenylalanine       4.0         26           1
 G glycine             6.0         39           1
 H histidine           8.1         53           2
 I isoleucine          3.8         25           1
 K lysine             11.1         72           2
 L leucine             6.0         39           2
 M methionine          1.7         11           2
 N asparagine          4.0         26           1
 P proline             2.9         19           1
 Q glutamine           4.1         27           1
 R arginine            7.2         47           2
 S serine              7.8         51           2
 T threonine           5.7         37           1
 V valine              3.2         21           1
 W tryptophan          0.3          2           1
 Y tyrosine            3.5         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 816A 
ZNF813                0.650   zinc finger protein 813 
ZNF808                0.631   zinc finger protein 808 
LOC388559             0.626   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.626   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.626   PREDICTED: hypothetical protein LOC388559 
ZNF845                0.617   zinc finger protein 845 
ZNF761                0.611   zinc finger protein 761 
ZNF860                0.592   zinc finger protein 860 
ZNF578                0.586   zinc finger protein 578 
ZNF611                0.571   zinc finger protein 611 isoform a 
ZNF611                0.571   zinc finger protein 611 isoform a 
ZNF611                0.571   zinc finger protein 611 isoform a 
ZNF600                0.549   zinc finger protein 600 
ZNF28                 0.546   zinc finger protein 28 
ZNF765                0.514   zinc finger protein 765 
ZNF616                0.509   zinc finger protein 616 
ZNF665                0.506   zinc finger protein 665 
ZNF836                0.500   zinc finger protein 836 
ZNF468                0.500   zinc finger protein ZNF468 isoform 2 
ZNF160                0.495   zinc finger protein 160 
ZNF160                0.495   zinc finger protein 160 
ZNF160                0.495   zinc finger protein 160 
ZNF347                0.492   zinc finger protein 347 
ZNF611                0.491   zinc finger protein 611 isoform b 
ZNF841                0.482   zinc finger protein 841 
ZNF320                0.456   zinc finger protein 320 
LOC400713             0.449   zinc finger protein LOC400713 
ZNF83                 0.447   zinc finger protein 83 isoform a 
ZNF83                 0.447   zinc finger protein 83 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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