Guide to the Human Genome
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Search of human proteins with 57013274

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2
isoform a [Homo sapiens]
         (360 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2 is...   710   0.0  
gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2 is...   710   0.0  
gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2 is...   710   0.0  
gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2 is...   653   0.0  
gi|46409302 NIPA-like domain containing 1 [Homo sapiens]              470   e-132
gi|149944536 ichthyin protein [Homo sapiens]                          415   e-116
gi|41406091 non-imprinted in Prader-Willi/Angelman syndrome 1 is...   271   9e-73
gi|214010179 non-imprinted in Prader-Willi/Angelman syndrome 1 i...   228   6e-60
gi|13376097 NIPA-like domain containing 2 [Homo sapiens]              149   3e-36
gi|10092687 NIPA-like domain containing 3 [Homo sapiens]              120   1e-27
gi|147907044 transmembrane protein 22 [Homo sapiens]                   32   0.88 
gi|148235965 transmembrane protein 22 [Homo sapiens]                   32   0.88 
gi|148224156 transmembrane protein 22 [Homo sapiens]                   32   0.88 
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ...    32   1.2  
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ...    32   1.2  
gi|55741641 kinase D-interacting substrate of 220 kDa [Homo sapi...    31   2.0  
gi|52353288 olfactory receptor, family 8, subfamily D, member 4 ...    31   2.0  
gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]                  30   2.6  
gi|62460635 transmembrane 9 superfamily member 1 isoform b [Homo...    30   3.4  
gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo...    30   3.4  
gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens neandert...    30   4.4  
gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]               30   4.4  
gi|30725877 G protein-coupled receptor 180 precursor [Homo sapiens]    30   4.4  
gi|53828674 olfactory receptor, family 13, subfamily C, member 4...    29   5.7  
gi|189027121 solute carrier family 35, member F1 [Homo sapiens]        29   7.5  
gi|47827222 solute carrier family 35, member E4 [Homo sapiens]         29   7.5  
gi|4504993 leukemia inhibitory factor receptor precursor [Homo s...    28   9.8  
gi|189083786 leukemia inhibitory factor receptor precursor [Homo...    28   9.8  
gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]             28   9.8  

>gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score =  710 bits (1833), Expect = 0.0
 Identities = 360/360 (100%), Positives = 360/360 (100%)

Query: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60
           MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW
Sbjct: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60

Query: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120
           AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI
Sbjct: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120

Query: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180
           LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV
Sbjct: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180

Query: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240
           YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL
Sbjct: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240

Query: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
           DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK
Sbjct: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300

Query: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360
           DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF
Sbjct: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360


>gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score =  710 bits (1833), Expect = 0.0
 Identities = 360/360 (100%), Positives = 360/360 (100%)

Query: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60
           MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW
Sbjct: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60

Query: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120
           AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI
Sbjct: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120

Query: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180
           LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV
Sbjct: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180

Query: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240
           YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL
Sbjct: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240

Query: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
           DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK
Sbjct: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300

Query: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360
           DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF
Sbjct: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360


>gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform a [Homo sapiens]
          Length = 360

 Score =  710 bits (1833), Expect = 0.0
 Identities = 360/360 (100%), Positives = 360/360 (100%)

Query: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60
           MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW
Sbjct: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60

Query: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120
           AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI
Sbjct: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120

Query: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180
           LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV
Sbjct: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180

Query: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240
           YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL
Sbjct: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240

Query: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
           DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK
Sbjct: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300

Query: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360
           DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF
Sbjct: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360


>gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2
           isoform b [Homo sapiens]
          Length = 341

 Score =  653 bits (1684), Expect = 0.0
 Identities = 340/360 (94%), Positives = 341/360 (94%), Gaps = 19/360 (5%)

Query: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWW 60
           MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRA              
Sbjct: 1   MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRA-------------- 46

Query: 61  AGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 120
                +GAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI
Sbjct: 47  -----VGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSI 101

Query: 121 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 180
           LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV
Sbjct: 102 LGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILV 161

Query: 181 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 240
           YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL
Sbjct: 162 YITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 221

Query: 241 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
           DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK
Sbjct: 222 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 281

Query: 301 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 360
           DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF
Sbjct: 282 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF 341


>gi|46409302 NIPA-like domain containing 1 [Homo sapiens]
          Length = 410

 Score =  470 bits (1209), Expect = e-132
 Identities = 232/329 (70%), Positives = 276/329 (83%), Gaps = 1/329 (0%)

Query: 7   KYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSM 66
           KY  Y+GL LA+SSSIFIG SFILKKKGLL+LA KG  RAGQGGH+YLKEWLWW GLLSM
Sbjct: 65  KYSLYVGLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLKEWLWWVGLLSM 124

Query: 67  GAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVM 126
           GAGE ANFAAYAFAPATLVTPLGALSVL+SAILSSYFLNE LN+HGKIGC+LSILGSTVM
Sbjct: 125 GAGEAANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVM 184

Query: 127 VIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICS 186
           VIHAP+EEE+ +L+EM  KL DPGF+ FA ++ +++L+LI +V P+ GQTNILVYI+ICS
Sbjct: 185 VIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICS 244

Query: 187 VIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTS 246
           +IGAFSVS VKGLGIAIKEL   KPV +HPL ++LL  L++ V+TQINYLN+ALD FNTS
Sbjct: 245 LIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTS 304

Query: 247 IVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSL 306
           +VTPIYYVFFT+ V+TCSAILF+EW  M   D+IGTLSGFFTII+GIFLLHAFK+   + 
Sbjct: 305 LVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDITW 364

Query: 307 ASLPVSFRKDEKAMNGNLSNMYEVLNNNE 335
           + L  + +K+  ++N N  N Y +L N E
Sbjct: 365 SELTSTAKKEAVSLNVN-ENNYVLLENLE 392


>gi|149944536 ichthyin protein [Homo sapiens]
          Length = 466

 Score =  415 bits (1066), Expect = e-116
 Identities = 207/306 (67%), Positives = 244/306 (79%)

Query: 5   RGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLL 64
           R  Y FYIGLGLA  SS  IG S ILKKKGLLRL   G+ RA  GG  YLK+ +WWAG L
Sbjct: 113 RQNYGFYIGLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFL 172

Query: 65  SMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGST 124
           +M AGEVANF AYAFAPAT+VTPLGALSVL+SAILSSYFL E LNL GK+GC++ + GST
Sbjct: 173 TMAAGEVANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGST 232

Query: 125 VMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITI 184
           VMVIHAP+EE++ T+ EM+ K+ D GF+VFA L+++  LILIFV+ PR+GQ NIL+YI I
Sbjct: 233 VMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIII 292

Query: 185 CSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFN 244
           CSVIGAFSV+ VKGLGI IK  F G PV+RHPL +IL L L + +STQ+N+LNRALDIFN
Sbjct: 293 CSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFN 352

Query: 245 TSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSF 304
           TS+V PIYYVFFTT V+T S ILFKEW  M   D+ GTLSGF TII+G+F+LHAFKD+  
Sbjct: 353 TSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDI 412

Query: 305 SLASLP 310
           S ASLP
Sbjct: 413 SCASLP 418


>gi|41406091 non-imprinted in Prader-Willi/Angelman syndrome 1
           isoform 1 [Homo sapiens]
          Length = 329

 Score =  271 bits (692), Expect = 9e-73
 Identities = 134/308 (43%), Positives = 206/308 (66%), Gaps = 10/308 (3%)

Query: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71
           +GLG+A+ SS+  G +F+L+KKG++R  R+G+        +YL + +WWAG ++M  G++
Sbjct: 30  LGLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT--------SYLTDIVWWAGTIAMAVGQI 81

Query: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAP 131
            NF AY   P  LVTPLGAL V   +IL+SY L E+LN+ GK+GCLLS  GS V++IH+P
Sbjct: 82  GNFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSP 141

Query: 132 KEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAF 191
           K E + T  E+  KL +P FV +  +V+++ L+LIF + P HG TNI+VYI+ICS++G+F
Sbjct: 142 KSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSF 201

Query: 192 SVSCVKGLGIAIKELFAGKPVLRHPLA-WILLLSLIVC-VSTQINYLNRALDIFNTSIVT 249
           +V   KG+G+A +++    P  +  L   ++LL+++ C +  Q  Y+N+AL+ F++S+  
Sbjct: 202 TVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFG 261

Query: 250 PIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASL 309
            IYYV FTT VL  SAILF+EW ++ + D +G   GF T+ VGI L+  FK+ +F+L  +
Sbjct: 262 AIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFNFNLGEM 321

Query: 310 PVSFRKDE 317
             S  K +
Sbjct: 322 NKSNMKTD 329


>gi|214010179 non-imprinted in Prader-Willi/Angelman syndrome 1
           isoform 2 [Homo sapiens]
          Length = 254

 Score =  228 bits (581), Expect = 6e-60
 Identities = 113/254 (44%), Positives = 169/254 (66%), Gaps = 2/254 (0%)

Query: 66  MGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTV 125
           M  G++ NF AY   P  LVTPLGAL V   +IL+SY L E+LN+ GK+GCLLS  GS V
Sbjct: 1   MAVGQIGNFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVV 60

Query: 126 MVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITIC 185
           ++IH+PK E + T  E+  KL +P FV +  +V+++ L+LIF + P HG TNI+VYI+IC
Sbjct: 61  LIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISIC 120

Query: 186 SVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLA-WILLLSLIVC-VSTQINYLNRALDIF 243
           S++G+F+V   KG+G+A +++    P  +  L   ++LL+++ C +  Q  Y+N+AL+ F
Sbjct: 121 SLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECF 180

Query: 244 NTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKDVS 303
           ++S+   IYYV FTT VL  SAILF+EW ++ + D +G   GF T+ VGI L+  FK+ +
Sbjct: 181 DSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKEFN 240

Query: 304 FSLASLPVSFRKDE 317
           F+L  +  S  K +
Sbjct: 241 FNLGEMNKSNMKTD 254


>gi|13376097 NIPA-like domain containing 2 [Homo sapiens]
          Length = 368

 Score =  149 bits (377), Expect = 3e-36
 Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 7/284 (2%)

Query: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72
           G+ LA+  ++ I  S  ++K   L+LA++   R       Y K  LWW G+L M  GE  
Sbjct: 50  GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFKSVLWWGGVLLMAVGETG 103

Query: 73  NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132
           NFAAY FAP TL+ PLG +SV  SAI+S  FL + L     +G  L+  G+ ++V  AP 
Sbjct: 104 NFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPN 163

Query: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192
             +  +   + + L    F+++  L +++  IL++    R G  ++++ +T+ +++ + +
Sbjct: 164 ITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLT 222

Query: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252
           V  VK +   I      K  L +P+ +I+ + +I     Q+ +LN+A  ++NT+ V P+ 
Sbjct: 223 VISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVN 282

Query: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL 296
           ++FFT S +    I ++E+   P   V   L G F   +G+FL+
Sbjct: 283 HIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326


>gi|10092687 NIPA-like domain containing 3 [Homo sapiens]
          Length = 406

 Score =  120 bits (302), Expect = 1e-27
 Identities = 88/342 (25%), Positives = 167/342 (48%), Gaps = 25/342 (7%)

Query: 12  IGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEV 71
           IG  LA+   + +  +  L+K   +RLA     RA      Y K   WW GL  M  GE+
Sbjct: 35  IGALLAIFGHLVVSIALNLQKYCHIRLAGSKDPRA------YFKTKTWWLGLFLMLLGEL 88

Query: 72  ANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNE--------RLNLHGKIGCLLSILGS 123
             FA+YAFAP +L+ PL A+SV+ SAI+   F+ E        R  +   +GC L+++G+
Sbjct: 89  GVFASYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAVVGT 148

Query: 124 TVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYIT 183
            ++V  AP   E  T   ++  L    F+++  + +I+  +L++    ++   NI+V + 
Sbjct: 149 YLLVTFAPNSHEKMTGENVTRHLVSWPFLLYMLVEIILFCLLLYFYKEKNA-NNIVVILL 207

Query: 184 ICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIF 243
           + +++G+ +V  VK +   +     G   L +P+ +++ + ++     Q  +L++A  ++
Sbjct: 208 LVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMY 267

Query: 244 NTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL--HAFKD 301
           ++S++  + Y+  TT  +T  AI + ++    V  +     G     +G+FL+  +  K 
Sbjct: 268 DSSLIASVGYILSTTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKP 327

Query: 302 VSF----SLASLPVSFRKDEKAMNG----NLSNMYEVLNNNE 335
           + F    S+ ++P      +K M        S  Y  L NN+
Sbjct: 328 IPFEPYISMDAMPGMQNMHDKGMTVQPELKASFSYGALENND 369


>gi|147907044 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 45/226 (19%), Positives = 96/226 (42%), Gaps = 30/226 (13%)

Query: 81  PATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLN 140
           P+   T   A + + SAIL+   ++E++        + SILG  +++I    +E+   LN
Sbjct: 191 PSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPNIVDEDNSLLN 250

Query: 141 EMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG 200
                 G     V A L   +++I+           +I   I++ + +  F  +   G  
Sbjct: 251 AWKEAFGYT-MTVMAGLTTALSMIV---------YRSIKEKISMWTALFTFGWT---GTI 297

Query: 201 IAIKELFAGKPVLRHPL------AWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYV 254
             I  +F    +L+ P+       W  L+++ VC +     +  ALD F+ ++V+ + ++
Sbjct: 298 WGISTMF----ILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHL 353

Query: 255 FFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
               +++    +L        +   I  + G   I++ +F+L  +K
Sbjct: 354 EIVVAMVLQLLVLH-------IFPSIYDVFGGVIIMISVFVLAGYK 392


>gi|148235965 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 45/226 (19%), Positives = 96/226 (42%), Gaps = 30/226 (13%)

Query: 81  PATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLN 140
           P+   T   A + + SAIL+   ++E++        + SILG  +++I    +E+   LN
Sbjct: 191 PSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPNIVDEDNSLLN 250

Query: 141 EMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG 200
                 G     V A L   +++I+           +I   I++ + +  F  +   G  
Sbjct: 251 AWKEAFGYT-MTVMAGLTTALSMIV---------YRSIKEKISMWTALFTFGWT---GTI 297

Query: 201 IAIKELFAGKPVLRHPL------AWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYV 254
             I  +F    +L+ P+       W  L+++ VC +     +  ALD F+ ++V+ + ++
Sbjct: 298 WGISTMF----ILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHL 353

Query: 255 FFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
               +++    +L        +   I  + G   I++ +F+L  +K
Sbjct: 354 EIVVAMVLQLLVLH-------IFPSIYDVFGGVIIMISVFVLAGYK 392


>gi|148224156 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 45/226 (19%), Positives = 96/226 (42%), Gaps = 30/226 (13%)

Query: 81  PATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLN 140
           P+   T   A + + SAIL+   ++E++        + SILG  +++I    +E+   LN
Sbjct: 191 PSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATVVCSILGVCLVMIPNIVDEDNSLLN 250

Query: 141 EMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLG 200
                 G     V A L   +++I+           +I   I++ + +  F  +   G  
Sbjct: 251 AWKEAFGYT-MTVMAGLTTALSMIV---------YRSIKEKISMWTALFTFGWT---GTI 297

Query: 201 IAIKELFAGKPVLRHPL------AWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYV 254
             I  +F    +L+ P+       W  L+++ VC +     +  ALD F+ ++V+ + ++
Sbjct: 298 WGISTMF----ILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPALVSTVQHL 353

Query: 255 FFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 300
               +++    +L        +   I  + G   I++ +F+L  +K
Sbjct: 354 EIVVAMVLQLLVLH-------IFPSIYDVFGGVIIMISVFVLAGYK 392


>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
           sapiens]
          Length = 391

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 152 VVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKEL---FA 208
           VV  +LVV+   +++ +  P    T++ V IT   VI    V  +  LG+ I  L     
Sbjct: 57  VVLTSLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVT 116

Query: 209 GKPVLRHPLAWIL------LLSLIVCVSTQINYLNRALDIFNTSIV--TPIYYVFFTTSV 260
              ++  PL  ++      + SL+V +++ +  +     +  +SIV  TP+  V  + +V
Sbjct: 117 SLVMVITPLVAVITPLGVVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVITSLTV 176

Query: 261 LTCS 264
           +  S
Sbjct: 177 IITS 180


>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
           sapiens]
          Length = 398

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 152 VVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKEL---FA 208
           VV  +LVV+   +++ +  P    T++ V IT   VI    V  +  LG+ I  L     
Sbjct: 64  VVLTSLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVT 123

Query: 209 GKPVLRHPLAWIL------LLSLIVCVSTQINYLNRALDIFNTSIV--TPIYYVFFTTSV 260
              ++  PL  ++      + SL+V +++ +  +     +  +SIV  TP+  V  + +V
Sbjct: 124 SLVMVITPLVAVITPLGVVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVITSLTV 183

Query: 261 LTCS 264
           +  S
Sbjct: 184 IITS 187


>gi|55741641 kinase D-interacting substrate of 220 kDa [Homo
           sapiens]
          Length = 1771

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 149 PGFVVFATLVVIV----ALILIFVVGPRHGQTNILVYITICSVIG-AFSVSC 195
           P FV+F  ++  +     L+ IF V P+H   N  V I+I SV+G AF ++C
Sbjct: 658 PSFVIFLFIIGCIISGITLLAIFRVDPKHLTVN-AVLISIASVVGLAFVLNC 708


>gi|52353288 olfactory receptor, family 8, subfamily D, member 4
           [Homo sapiens]
          Length = 314

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 184 ICSVIGA--FSVSCVKGL---GIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQIN---- 234
           +CS++ A  FSV     +   G  ++  F G  +++H    I+ L  + C ST I+    
Sbjct: 140 VCSLLVAAVFSVGFTDAVIHGGCILRLSFCGSNIIKHYFCDIVPLIKLSCSSTYIDELLI 199

Query: 235 YLNRALDIFNTSIVTPIYYVFFTTSVL 261
           ++    ++  TS+   I Y F  TS+L
Sbjct: 200 FVIGGFNMVATSLTIIISYAFILTSIL 226


>gi|32964823 antimicrobial peptide RYA3 [Homo sapiens]
          Length = 476

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 276 VDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPV 311
           VD V+G ++     ++G+  L A   V FSLA+LP+
Sbjct: 202 VDSVLGVVNELLGAVLGLVSLGALGSVEFSLATLPL 237


>gi|62460635 transmembrane 9 superfamily member 1 isoform b [Homo
           sapiens]
          Length = 489

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 16/127 (12%)

Query: 184 ICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPL---AWILLLSLIVCVSTQI-NYLNRA 239
           +C+V+G  +     G GI +  L     V RH     A ILL +L  C+S  + ++  R 
Sbjct: 307 LCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQ 366

Query: 240 LD----IFNTSIVTPIYYV--FFTTSVLTCSAILFKEWQDMPVDDV-----IGTLSGF-F 287
           +     ++N  + T ++ V  F T SV+          Q +P   +     +  L GF  
Sbjct: 367 IGGERWVWNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPL 426

Query: 288 TIIVGIF 294
           T+I GIF
Sbjct: 427 TVIGGIF 433


>gi|21361315 transmembrane 9 superfamily member 1 isoform a [Homo
           sapiens]
          Length = 606

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 16/127 (12%)

Query: 184 ICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPL---AWILLLSLIVCVSTQI-NYLNRA 239
           +C+V+G  +     G GI +  L     V RH     A ILL +L  C+S  + ++  R 
Sbjct: 307 LCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQ 366

Query: 240 LD----IFNTSIVTPIYYV--FFTTSVLTCSAILFKEWQDMPVDDV-----IGTLSGF-F 287
           +     ++N  + T ++ V  F T SV+          Q +P   +     +  L GF  
Sbjct: 367 IGGERWVWNIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPL 426

Query: 288 TIIVGIF 294
           T+I GIF
Sbjct: 427 TVIGGIF 433


>gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
           neanderthalensis]
          Length = 459

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147

Query: 283 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 311
              F+T++  + LL A      +L SL +
Sbjct: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176


>gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]
          Length = 459

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282
           L L + +S QI+ +   +    T ++  ++Y+FF T+++   AI+ + W + P     GT
Sbjct: 94  LYLSMLISLQISLI---MTFTATELI--MFYIFFETTLIPTLAIITR-WGNQPERLNAGT 147

Query: 283 LSGFFTIIVGIFLLHAFKDVSFSLASLPV 311
              F+T++  + LL A      +L SL +
Sbjct: 148 YFLFYTLVGSLPLLIALIYTHNTLGSLNI 176


>gi|30725877 G protein-coupled receptor 180 precursor [Homo sapiens]
          Length = 440

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 215 HPLAWILLLSLIVCVSTQINY-LNRALDIFNTSIVTPIYYV--------FFTTSVLTCSA 265
           H LA ILL+ L +C++  +   L + + +  +++    Y          F    VL C +
Sbjct: 319 HNLAGILLIVLRICLALSLGCGLYQIITVERSTLKREFYITFAKGCILWFLCHPVLACIS 378

Query: 266 ILFKEWQDMPV--DDVIGTLSGFFTIIVGIFLLHA--FKDVSFSLASLPVSFRKDEKA 319
           ++F ++Q   V    VI   S    I+  +FL H+  ++  S S  +LP++     K+
Sbjct: 379 VIFSDYQRDKVITIGVILCQSVSMVILYRLFLSHSLYWEVSSLSSVTLPLTISSGHKS 436


>gi|53828674 olfactory receptor, family 13, subfamily C, member 4
           [Homo sapiens]
          Length = 318

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 177 NILVYITICSVIG-AFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINY 235
           N +VY+ + SV   +  ++      +A++  F G  ++ H L  IL +  + C    +N 
Sbjct: 137 NKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHFLCEILAVLKLACSDISVNI 196

Query: 236 LNRALDIFNTSIVTPIYYVFFT 257
           +  A+      +V P+  +FF+
Sbjct: 197 VTLAVSNI-AFLVLPLLVIFFS 217


>gi|189027121 solute carrier family 35, member F1 [Homo sapiens]
          Length = 408

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 60/266 (22%), Positives = 104/266 (39%), Gaps = 39/266 (14%)

Query: 43  SMRAGQGGHAYLKEWLWWA----GLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAI 98
           ++R G+     +    WW     GL+ + A  +    AY +   T +  L    + V  +
Sbjct: 113 AVRQGEENLLAILRRRWWKYMILGLIDLEANYLV-VKAYQYTTLTSIQLLDCFVIPVVIL 171

Query: 99  LSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLV 158
           LS +FL  R      IG ++ ILG   MV         +   E +  +GD   +  ATL 
Sbjct: 172 LSWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGE-NKLVGDLLVLGGATLY 230

Query: 159 VIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLA 218
            I  +   +++         L  +    +IG F  +   G+ +AI E    K +L+ P  
Sbjct: 231 GISNVWEEYII-------RTLSRVEFLGMIGLFG-AFFSGIQLAIME---HKELLKVPWD 279

Query: 219 W---ILLLSLIVCVSTQINYL-----NRALDIFNTSIVTPIYYVFFTTSVLTCSAILFK- 269
           W   +L +    C+    +++       +    N S++T   Y  F      C   LF  
Sbjct: 280 WQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLF------CGLFLFHY 333

Query: 270 EWQDMPVDDVIGTLSGFFTIIVGIFL 295
           ++  +        L  FFTI++G+ L
Sbjct: 334 KFSGL-------YLLSFFTILIGLVL 352


>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
          Length = 350

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 71  VANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILG 122
           +A+F+  A   A  V  LG L+V+ + ILS      RL+    +G  L++ G
Sbjct: 270 LASFSLLALTSALTVHVLGNLTVVGNLILSRLLFGSRLSALSYVGIALTLSG 321


>gi|4504993 leukemia inhibitory factor receptor precursor [Homo
           sapiens]
          Length = 1097

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 248 VTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGF 286
           + PI    FT    +  +IL K W+D+PV+++ G L G+
Sbjct: 722 LAPIVAPNFTVEDTSADSILVK-WEDIPVEELRGFLRGY 759


>gi|189083786 leukemia inhibitory factor receptor precursor [Homo
           sapiens]
          Length = 1097

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 248 VTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGF 286
           + PI    FT    +  +IL K W+D+PV+++ G L G+
Sbjct: 722 LAPIVAPNFTVEDTSADSILVK-WEDIPVEELRGFLRGY 759


>gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]
          Length = 169

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 275 PVDDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVSFRKDE 317
           P D   GT+ G F I VG  L+H    V  +   + + FR DE
Sbjct: 113 PADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE 155


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,541,804
Number of Sequences: 37866
Number of extensions: 513186
Number of successful extensions: 1526
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1500
Number of HSP's gapped (non-prelim): 29
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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