Guide to the Human Genome
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Name: ND4 Sequence: fasta or formatted (459aa) NCBI GI: 251831116
Description:

NADH dehydrogenase subunit 4

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt mRNA {459aa} NADH dehydrogenase subunit 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         26           2
 C cysteine            0.7          3           1
 D aspartate           0.7          3           1
 E glutamate           2.0          9           1
 F phenylalanine       4.4         20           2
 G glycine             3.7         17           2
 H histidine           2.8         13           2
 I isoleucine          8.5         39           2
 K lysine              2.4         11           2
 L leucine            20.9         96           3
 M methionine          5.9         27           2
 N asparagine          5.0         23           3
 P proline             5.0         23           2
 Q glutamine           2.2         10           1
 R arginine            2.0          9           1
 S serine              9.4         43           2
 T threonine          10.5         48           3
 V valine              2.8         13           2
 W tryptophan          2.8         13           2
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase subunit 4 
ND4                   1.000   NADH dehydrogenase subunit 4 
ND5                   0.054   NADH dehydrogenase subunit 5 
ND5                   0.053   NADH dehydrogenase subunit 5 
ND2                   0.037   NADH dehydrogenase subunit 2 
ND2                   0.037   NADH dehydrogenase subunit 2 
TM9SF1                0.014   transmembrane 9 superfamily member 1 isoform a [Homo...
OR2T12                0.011   olfactory receptor, family 2, subfamily T, member 12...
F2RL1                 0.009   coagulation factor II (thrombin) receptor-like 1 pre...
YIPF1                 0.008   Yip1 domain family, member 1 
WDFY3                 0.008   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
DPY19L1               0.008   dpy-19-like 1 
OR2D2                 0.008   olfactory receptor, family 2, subfamily D, member 2 ...
OR2AG1                0.007   olfactory receptor, family 2, subfamily AG, member 1...
P2RY1                 0.007   purinergic receptor P2Y1 
TLCD2                 0.006   PREDICTED: TLC domain containing 2 
TLCD2                 0.006   PREDICTED: hypothetical protein 
TLCD2                 0.006   PREDICTED: TLC domain containing 2 
CCKAR                 0.006   cholecystokinin A receptor 
CD1D                  0.006   CD1D antigen precursor 
LOC100132369          0.006   PREDICTED: hypothetical protein 
LOC100132369          0.006   PREDICTED: hypothetical protein 
LOC100132369          0.006   PREDICTED: hypothetical protein 
NIPA2                 0.006   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.006   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.006   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.006   non imprinted in Prader-Willi/Angelman syndrome 2 is...
OR2T8                 0.005   olfactory receptor, family 2, subfamily T, member 8 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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