NIPA1 27849

Name: NIPA1	Sequence: fasta or formatted (329aa)		NCBI GI: 41406091
Description: non-imprinted in Prader-Willi/Angelman syndrome 1 isoform 1		Referenced in: Additional Brain Proteins
Other entries for this name: alt prot [254aa] non-imprinted in Prader-Willi/Angelman syndrome 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 38 13 C cysteine 2.7 9 1 D aspartate 1.5 5 1 E glutamate 3.0 10 2 F phenylalanine 4.9 16 1 G glycine 8.8 29 1 H histidine 0.9 3 1 I isoleucine 7.0 23 2 K lysine 4.0 13 2 L leucine 14.0 46 4 M methionine 2.1 7 1 N asparagine 4.0 13 2 P proline 3.3 11 1 Q glutamine 2.1 7 1 R arginine 2.1 7 2 S serine 8.2 27 2 T threonine 5.8 19 2 V valine 10.3 34 2 W tryptophan 1.2 4 2 Y tyrosine 2.4 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 non-imprinted in Prader-Willi/Angelman syndrome 1 is... NIPA1 0.772 non-imprinted in Prader-Willi/Angelman syndrome 1 i... NIPA2 0.401 non imprinted in Prader-Willi/Angelman syndrome 2 is... NIPA2 0.401 non imprinted in Prader-Willi/Angelman syndrome 2 is... NIPA2 0.401 non imprinted in Prader-Willi/Angelman syndrome 2 is... NIPAL1 0.389 NIPA-like domain containing 1 NIPA2 0.368 non imprinted in Prader-Willi/Angelman syndrome 2 is... NIPAL4 0.365 ichthyin protein NIPAL3 0.134 NIPA-like domain containing 3 NIPAL2 0.125 NIPA-like domain containing 2 HOXA13 0.020 homeobox A13 FOXD1 0.018 forkhead box D1 FOXL2 0.016 forkhead box L2 MAZ 0.015 MYC-associated zinc finger protein isoform 2 MAZ 0.015 MYC-associated zinc finger protein isoform 1 BTBD2 0.013 BTB (POZ) domain containing 2 ITGB8 0.013 integrin, beta 8 precursor SLC7A5 0.013 solute carrier family 7 (cationic amino acid transpo... MNX1 0.013 homeo box HB9 ZSWIM6 0.013 zinc finger, SWIM-type containing 6 GDF11 0.013 growth differentiation factor 11 precursor LBXCOR1 0.011 LBXCOR1 homolog REPS2 0.011 RALBP1 associated Eps domain containing 2 isoform 2... REPS2 0.011 RALBP1 associated Eps domain containing 2 isoform 1... FAM48B1 0.011 hypothetical protein LOC100130302 DMRTA1 0.011 DMRT-like family A1 LHX2 0.010 LIM homeobox protein 2 ZNF358 0.010 zinc finger protein 358 SLC12A2 0.008 solute carrier family 12 (sodium/potassium/chloride t... TRIM28 0.008 tripartite motif-containing 28 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.