Guide to the Human Genome
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Name: ASCC1 Sequence: fasta or formatted (357aa) NCBI GI: 56676391
Description:

activating signal cointegrator 1 complex subunit 1

Referenced in:

Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         13           1
 C cysteine            1.7          6           1
 D aspartate           5.9         21           2
 E glutamate           9.8         35           3
 F phenylalanine       5.9         21           2
 G glycine             6.7         24           2
 H histidine           2.5          9           1
 I isoleucine          6.2         22           1
 K lysine              6.2         22           2
 L leucine             8.4         30           2
 M methionine          3.1         11           1
 N asparagine          4.5         16           1
 P proline             3.4         12           1
 Q glutamine           5.9         21           2
 R arginine            6.2         22           2
 S serine              5.9         21           2
 T threonine           4.5         16           1
 V valine              6.2         22           1
 W tryptophan          0.3          1           1
 Y tyrosine            3.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating signal cointegrator 1 complex subunit 1 [... 
AKAP7                 0.033   A-kinase anchor protein 7 isoform gamma 
HDLBP                 0.017   high density lipoprotein binding protein 
HDLBP                 0.017   high density lipoprotein binding protein 
BICC1                 0.011   bicaudal C homolog 1 
MEX3B                 0.011   mex-3 homolog B 
RBM22                 0.010   RNA binding motif protein 22 
AKD1                  0.010   adenylate kinase domain containing 1 isoform 1 [Hom...
AKD1                  0.010   adenylate kinase domain containing 1 isoform 2 [Homo...
MEX3A                 0.010   MEX3A protein 
MEX3C                 0.009   ring finger and KH domain containing 2 
MAPKAP1               0.007   mitogen-activated protein kinase associated protein ...
TBKBP1                0.007   TBK1 binding protein 1 
MEX3D                 0.007   ring finger and KH domain containing 1 
POLR2E                0.007   DNA directed RNA polymerase II polypeptide E 
ADAR                  0.006   adenosine deaminase, RNA-specific isoform d 
ADAR                  0.006   adenosine deaminase, RNA-specific isoform c 
ADAR                  0.006   adenosine deaminase, RNA-specific isoform b 
ADAR                  0.006   adenosine deaminase, RNA-specific isoform a 
LOXHD1                0.006   lipoxygenase homology domains 1 isoform 1 
NBEAL1                0.006   neurobeachin-like 1 isoform 3 
OCA2                  0.004   oculocutaneous albinism II 
CDH7                  0.004   cadherin 7, type 2 preproprotein 
CDH7                  0.004   cadherin 7, type 2 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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