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Search of human proteins with 134254443
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134254443 pecanex-like 2 [Homo sapiens]
(2137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134254443 pecanex-like 2 [Homo sapiens] 4296 0.0
gi|157743252 pecanex-like 3 [Homo sapiens] 1568 0.0
gi|126723564 pecanex-like 1 [Homo sapiens] 1496 0.0
gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo... 75 9e-13
gi|217330641 IWS1 homolog [Homo sapiens] 52 6e-06
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 48 9e-05
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 48 1e-04
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 45 8e-04
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 41 0.011
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 41 0.011
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 41 0.011
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 41 0.011
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 41 0.011
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 41 0.011
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 40 0.024
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 39 0.055
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 39 0.055
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 39 0.071
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 39 0.071
gi|56676335 RAP1 interacting factor 1 [Homo sapiens] 39 0.071
gi|223468617 family with sequence similarity 75, member C1 [Homo... 38 0.093
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 38 0.12
gi|10835159 plasminogen activator inhibitor-1 [Homo sapiens] 37 0.16
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 37 0.16
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 37 0.16
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.16
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.16
gi|116256485 chromosome 6 open reading frame 10 [Homo sapiens] 37 0.16
gi|38569495 ELL associated factor 1 [Homo sapiens] 37 0.21
gi|22325364 ubiquitin associated protein 2 [Homo sapiens] 37 0.21
>gi|134254443 pecanex-like 2 [Homo sapiens]
Length = 2137
Score = 4296 bits (11143), Expect = 0.0
Identities = 2137/2137 (100%), Positives = 2137/2137 (100%)
Query: 1 MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALHLAFPPNAIIV 60
MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALHLAFPPNAIIV
Sbjct: 1 MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALHLAFPPNAIIV 60
Query: 61 FFYCSAVTIFFTIIKLVSYRLHLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRNPS 120
FFYCSAVTIFFTIIKLVSYRLHLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRNPS
Sbjct: 61 FFYCSAVTIFFTIIKLVSYRLHLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRNPS 120
Query: 121 NNRQIHNGKKEEASRNLSTPPLRCSSRGQSITSHHSSGPLELSAQETVEDLKGVILLEDH 180
NNRQIHNGKKEEASRNLSTPPLRCSSRGQSITSHHSSGPLELSAQETVEDLKGVILLEDH
Sbjct: 121 NNRQIHNGKKEEASRNLSTPPLRCSSRGQSITSHHSSGPLELSAQETVEDLKGVILLEDH 180
Query: 181 PIAPVSSTSPGIKVESLPASQAHMLETTTKSVIPVKPVATETLINGKGKERGGKGQPPLR 240
PIAPVSSTSPGIKVESLPASQAHMLETTTKSVIPVKPVATETLINGKGKERGGKGQPPLR
Sbjct: 181 PIAPVSSTSPGIKVESLPASQAHMLETTTKSVIPVKPVATETLINGKGKERGGKGQPPLR 240
Query: 241 HRSEGGLVDKGPLKKLPHLSLSQYDLLETDVSFQPWGSENSVLIPEPVSCPRGSIRERVQ 300
HRSEGGLVDKGPLKKLPHLSLSQYDLLETDVSFQPWGSENSVLIPEPVSCPRGSIRERVQ
Sbjct: 241 HRSEGGLVDKGPLKKLPHLSLSQYDLLETDVSFQPWGSENSVLIPEPVSCPRGSIRERVQ 300
Query: 301 SKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLID 360
SKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLID
Sbjct: 301 SKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLID 360
Query: 361 TSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGS 420
TSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGS
Sbjct: 361 TSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGS 420
Query: 421 PNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIK 480
PNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIK
Sbjct: 421 PNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIK 480
Query: 481 DHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVF 540
DHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVF
Sbjct: 481 DHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVF 540
Query: 541 LSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGS 600
LSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGS
Sbjct: 541 LSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGS 600
Query: 601 AEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTA 660
AEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTA
Sbjct: 601 AEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTA 660
Query: 661 FFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSG 720
FFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSG
Sbjct: 661 FFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSG 720
Query: 721 NQKEGPLQPLPSNNDCLSQAREMQVSSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRT 780
NQKEGPLQPLPSNNDCLSQAREMQVSSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRT
Sbjct: 721 NQKEGPLQPLPSNNDCLSQAREMQVSSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRT 780
Query: 781 QSETPRHVSQDLEASSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDIK 840
QSETPRHVSQDLEASSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDIK
Sbjct: 781 QSETPRHVSQDLEASSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDIK 840
Query: 841 ENVLAILLIVLVSLLGFLTLSQGFCKDMWVLLFCLVMASCQYSLLKSVQPDPASPIHGHN 900
ENVLAILLIVLVSLLGFLTLSQGFCKDMWVLLFCLVMASCQYSLLKSVQPDPASPIHGHN
Sbjct: 841 ENVLAILLIVLVSLLGFLTLSQGFCKDMWVLLFCLVMASCQYSLLKSVQPDPASPIHGHN 900
Query: 901 QIITYSRPIYFCVLCGLILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCF 960
QIITYSRPIYFCVLCGLILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCF
Sbjct: 901 QIITYSRPIYFCVLCGLILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCF 960
Query: 961 PAISLLGLFPQINTFCTYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSA 1020
PAISLLGLFPQINTFCTYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSA
Sbjct: 961 PAISLLGLFPQINTFCTYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSA 1020
Query: 1021 VKEPWSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAA 1080
VKEPWSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAA
Sbjct: 1021 VKEPWSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAA 1080
Query: 1081 DPLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVT 1140
DPLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVT
Sbjct: 1081 DPLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVT 1140
Query: 1141 HYVLPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALI 1200
HYVLPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALI
Sbjct: 1141 HYVLPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALI 1200
Query: 1201 LNALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYK 1260
LNALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYK
Sbjct: 1201 LNALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYK 1260
Query: 1261 DISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAML 1320
DISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAML
Sbjct: 1261 DISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAML 1320
Query: 1321 FFQTIATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGN 1380
FFQTIATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGN
Sbjct: 1321 FFQTIATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGN 1380
Query: 1381 DDNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLV 1440
DDNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLV
Sbjct: 1381 DDNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLV 1440
Query: 1441 TFQLRGLEFRGTYCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEIT 1500
TFQLRGLEFRGTYCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEIT
Sbjct: 1441 TFQLRGLEFRGTYCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEIT 1500
Query: 1501 QTQYILEGYSILDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSL 1560
QTQYILEGYSILDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSL
Sbjct: 1501 QTQYILEGYSILDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSL 1560
Query: 1561 QPFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDS 1620
QPFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDS
Sbjct: 1561 QPFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDS 1620
Query: 1621 DEDSPLVTLSFALCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITARDEWVFADM 1680
DEDSPLVTLSFALCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITARDEWVFADM
Sbjct: 1621 DEDSPLVTLSFALCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITARDEWVFADM 1680
Query: 1681 DLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVL 1740
DLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVL
Sbjct: 1681 DLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVL 1740
Query: 1741 SNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRN 1800
SNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRN
Sbjct: 1741 SNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRN 1800
Query: 1801 PERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRT 1860
PERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRT
Sbjct: 1801 PERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRT 1860
Query: 1861 WFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHG 1920
WFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHG
Sbjct: 1861 WFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHG 1920
Query: 1921 VSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQTFLQTSTSVHELAQRL 1980
VSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQTFLQTSTSVHELAQRL
Sbjct: 1921 VSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQTFLQTSTSVHELAQRL 1980
Query: 1981 SGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSFLFGKRSFSS 2040
SGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSFLFGKRSFSS
Sbjct: 1981 SGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSFLFGKRSFSS 2040
Query: 2041 ALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRHLSEPCEPPDATEQGQLHDR 2100
ALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRHLSEPCEPPDATEQGQLHDR
Sbjct: 2041 ALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRHLSEPCEPPDATEQGQLHDR 2100
Query: 2101 CLAEAVADTLGVVCRRASQEDMGLDDTASQQSVSDEQ 2137
CLAEAVADTLGVVCRRASQEDMGLDDTASQQSVSDEQ
Sbjct: 2101 CLAEAVADTLGVVCRRASQEDMGLDDTASQQSVSDEQ 2137
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 1568 bits (4060), Expect = 0.0
Identities = 919/2029 (45%), Positives = 1207/2029 (59%), Gaps = 168/2029 (8%)
Query: 1 MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALHLAFPPNAIIV 60
M SQVLQ+LRQGVWA+LTGGW+ DP QS F+N HLY+W+FLL+ P L++ PP+ ++
Sbjct: 1 MGSQVLQILRQGVWASLTGGWFFDPHQSTFSNCFHLYVWIFLLIFPFLLYMVLPPSLMVA 60
Query: 61 FFYCSAVTIFFTIIKLVSYRLHLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRNPS 120
YC V + F IK V+YRLH MFD+GE+++++ S E +++ A+G+ NP
Sbjct: 61 GVYCLVVAVIFATIKTVNYRLHAMFDQGEIVEKRSSTMGEL--EEEPAQGDS-----NPP 113
Query: 121 NNRQIHNGKKEEASRNLSTPPLRCSSRGQSITSHHSSGPL-ELSAQETVEDLKGVILLED 179
+ + + S STPP+RCSS+ + S L + + D+K ++ +
Sbjct: 114 RDPGVEMTVFRKVS---STPPVRCSSQHSVFGFNQVSELLPRMEDSGPLRDIKELVREQG 170
Query: 180 HPIAPVSSTSPGIKVESLPASQAHMLETTTKSVIPVKPVATETLINGKGKERGGKGQP-- 237
V+S + S L T +P +A+ + + G G P
Sbjct: 171 SNNVIVTSADREMLKLSSQEKLIGDLPQTPPGAVPDPSLASTD--SSEPSPLAGDGAPWS 228
Query: 238 -------PLRHRSEGGLVDKGPLKKLPHLSLSQYD--LLETDV---------SFQPWGSE 279
P+ +G L + L K L+L+Q D L+ T +QP
Sbjct: 229 GSSMADTPMSPLLKGSLSQE--LSK-SFLTLTQPDRALVRTSSRREQRRGAGGYQPLDRR 285
Query: 280 NSVLIPEPVSCPRGSIRERVQSKSPQDSLSS--SCPQCDTIVAKPVEEPADTSCQVDTSC 337
S EP GS + S + +++LSS S T + P PA D
Sbjct: 286 GS---GEPTPQKAGS-SDSCFSGTDRETLSSFKSEKTNSTHLDSPPGGPAPEGSDTDPPS 341
Query: 338 QGDLPLHQEVDSSDSEVAVTLIDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLR 397
+ +LP + + + G P L EP+ +V P + L S
Sbjct: 342 EAELPASPDAGVPSDDTLRSFDTVIGAGTPPGLAEPLLVV-----RPKDLALLRPSKR-- 394
Query: 398 VVGTEKTSVKSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPE- 456
+P P SP P++ EGGG GSE +P
Sbjct: 395 -------------QP--PLRRHSPPGRAPRRPLL-----EGGGFFEDEDTSEGSELSPAS 434
Query: 457 --RLKTRVSTNQCSGYG--SGEGGNAIKDHSSSSREPWESVSRLTPDTGSESKVGKEGQT 512
R + R ST+ S S E R P + + G+ + T
Sbjct: 435 SLRSQRRYSTDSSSSTSCYSPESSRGAAGGPRKRRAPHGA------EEGTAVPPKRPYGT 488
Query: 513 NLDPSSCKSSHEKRHARVLSVD-SGTDVF---LSKSSAEIVNDTEKTMPTSKSDL---EA 565
PS+ + K HARVLS+D +G DV L+ AE+ S+ + EA
Sbjct: 489 QRTPSTASA---KTHARVLSMDGAGGDVLRPPLAGCKAELEAQVGVEQAASEPVVLPAEA 545
Query: 566 KEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILEN 625
+ G N+ + ++ + G+AE+ RD S ++ + +
Sbjct: 546 RRGPAANQPGW-----------RGELQEEGAVGGAAEETGR----RDRSSSVRRTQAIRR 590
Query: 626 E-----KPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTAFFQGNRQRQIIYRVTSQQDS 680
P+ +S G P P+ Q A+ + R + S
Sbjct: 591 RHNAGSNPTPPASVMGSP-----------PSSLQEAQRGR--AASHSRALTLPSALHFAS 637
Query: 681 SVLQVISGP---ETSVQEEISVDAMHVFIDEHGEIRS-CYLKSGNQKEGPLQPLPSNNDC 736
S+L +G E ++ S A+H F DE G RS + +G E P+
Sbjct: 638 SLLLTRAGANVHEACTFDDTSEGAVHYFYDESGVRRSYTFGLAGGGYENPVGQ--QGEQT 695
Query: 737 LSQAREMQVSSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRTQSETPRHVSQDLEASS 796
+ A + SSS +++ + + G + L M RR E P + EA
Sbjct: 696 ANGAWDRHSHSSSFHSADVPEATGGLNLLQPRPVVLQGMQVRRVPLEIPEEQTLMEEAPP 755
Query: 797 CSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDIKENVLAILLIVLVSLLG 856
+ YK+ + PG+W V Y+RL LLALLDRT + EN+ + L LV+ LG
Sbjct: 756 --------RAQHSYKYWLLPGRWTSVRYERLALLALLDRTRGVLENIFGVGLSSLVAFLG 807
Query: 857 FLTLSQGFCKDMWVLLFCLVMASCQYSLLKSVQPDPASPIHGHNQIITYSRPIYFCVLCG 916
+L L +GF D+WV FCLV+ASCQYSLLKSVQPD ASP+HGHN +I YSRP+YFC+ C
Sbjct: 808 YLLLLKGFFTDIWVFQFCLVIASCQYSLLKSVQPDAASPMHGHNWVIAYSRPVYFCICCL 867
Query: 917 LILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCFPAISLLGLFPQINTFC 976
LI LLD A+ P +YGL LFS F ARD VF CFP + LLGL PQ+NT
Sbjct: 868 LIWLLDALGSAQPFPPVSLYGLTLFSASFFFCARDVATVFTLCFPFVFLLGLLPQVNTCL 927
Query: 977 TYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSAVKEPWSMQHIPALFSA 1036
YLLEQIDM FGG+A + +AV+S++RS+LAAALL+ C A+K PW QH+P LFS
Sbjct: 928 MYLLEQIDMHGFGGTAATSPLTAVFSLSRSLLAAALLYGFCLGAIKTPWPEQHVPVLFSV 987
Query: 1037 FCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAA---DPLPKKMKDSVTD 1093
FCGLLVALSYHLSRQSSDP+VL S I+ +LFP+ ++L + A DPLP KM+ SV +
Sbjct: 988 FCGLLVALSYHLSRQSSDPTVLWSLIRSKLFPELEERSLETARAEPPDPLPDKMRQSVRE 1047
Query: 1094 VLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYVLPQLRKHHPW 1153
VL DL++C V+AVL+FA+SASTVF++L+ L VL+ALAGAVGF THY+LPQLRK PW
Sbjct: 1048 VLHSDLVMCVVIAVLTFAISASTVFIALKSVLGFVLYALAGAVGFFTHYLLPQLRKQLPW 1107
Query: 1154 MWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALILNALTIDAFLISN 1213
+S P+LK EY Q EVR A +MWFE+LY LQC EKY++YPA++LNALT+DA + +
Sbjct: 1108 FCLSQPVLKPLEYSQYEVRGAAQVMWFEKLYAGLQCVEKYLIYPAVVLNALTVDAHTVVS 1167
Query: 1214 HR-RLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYKDISESFLLDFFM 1272
H + + LM +AG+KLLR++FC P Q++ L+FTV+ FHFDY +S+ FLLD+F+
Sbjct: 1168 HPDKYCFYCRALLMTVAGLKLLRSAFCCPPQQYLTLAFTVLLFHFDYPRLSQGFLLDYFL 1227
Query: 1273 VSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTIATSIFST 1332
+S+L SKL DLL+KL+FVLTY+APWQ+ WGS+FH FAQ FA+PHSAMLF Q + + +FST
Sbjct: 1228 MSLLCSKLWDLLYKLRFVLTYIAPWQITWGSAFHAFAQPFAVPHSAMLFVQALLSGLFST 1287
Query: 1333 PLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGNDDNNLNSIFYEH 1392
PL+P LGS +FI SY RP+KFWE++YNT+RVD+SNTRL Q++R+PG DDNNLNSIFYEH
Sbjct: 1288 PLNPLLGSAVFIMSYARPLKFWERDYNTKRVDHSNTRLVTQLDRNPGADDNNLNSIFYEH 1347
Query: 1393 LTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLVTFQLRGLEFRGT 1452
LTR+LQ +LCGDLVLGRWGNY GDCF+LASD LNA VHLIE+GNGLVTFQLRGLEFRGT
Sbjct: 1348 LTRSLQHTLCGDLVLGRWGNYGPGDCFVLASDYLNALVHLIEVGNGLVTFQLRGLEFRGT 1407
Query: 1453 YCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEITQTQYILEGYSIL 1512
YCQQREVEAI EG EED GCCCC+PGHLP +LS NAAF RWL WE+T ++Y+LEGYSI
Sbjct: 1408 YCQQREVEAITEGVEEDEGCCCCEPGHLPRVLSFNAAFGQRWLAWEVTASKYVLEGYSIS 1467
Query: 1513 DNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSLQPFAKWHYIERD 1572
DNNAA+MLQVFDLR+ILI YY+KSIIYY+ SPKL W+ +E + +L+P Y + D
Sbjct: 1468 DNNAASMLQVFDLRKILITYYVKSIIYYVSRSPKLEVWLSHEGITAALRPVRVPGYADSD 1527
Query: 1573 LAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDSDEDSPLVTLSFA 1632
F++++D+DY L G++ SFC V+LEWIQ+CA +R +P +D D +SPLVTL F
Sbjct: 1528 -PTFSLSVDEDYDLRLSGLSLPSFCAVHLEWIQYCASRRSQP---VDQDWNSPLVTLCFG 1583
Query: 1633 LCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITA-RDEWVFADMDLLHKVVAPAI 1691
LC LGRRALGTA+H+M+ SL+ FLYGLH LFKGDFRIT+ RDEWVFADMDLLH+VVAP +
Sbjct: 1584 LCVLGRRALGTASHSMSASLEPFLYGLHALFKGDFRITSPRDEWVFADMDLLHRVVAPGV 1643
Query: 1692 RMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVLSNKEELLTLRH 1751
RM+LKLHQD FT PDEYE+PA LY+AI + E+++VI HEGDPAWR A+LSN LL LRH
Sbjct: 1644 RMALKLHQDHFTSPDEYEEPAALYDAIAANEERLVISHEGDPAWRSAILSNTPSLLALRH 1703
Query: 1752 VVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRNPERGSIQNNKQ 1811
V+D+ +DEYK+IML+R LSF+VIKVN+ECVRGLWAGQQQEL+FLRNRNPERGSIQN KQ
Sbjct: 1704 VLDDASDEYKIIMLNRRHLSFRVIKVNRECVRGLWAGQQQELVFLRNRNPERGSIQNAKQ 1763
Query: 1812 VLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRTWFWTKWVRMRK 1871
LRN+INSSCDQPLGYP+YVSPLTTS G+H QL+ +WGGPI+L I W W R+ K
Sbjct: 1764 ALRNMINSSCDQPLGYPIYVSPLTTSLAGSHPQLRALWGGPISLGAIAHWLLRTWERLHK 1823
Query: 1872 DCNARQHSGGNIEDVD--GGGAPTTGGNNA----PSGGSQESSAEQPRKGGAQHGVSSCE 1925
C A +SGGN++D D GGG T+ NN P+ + + +QP G G S
Sbjct: 1824 GCGAGCNSGGNVDDSDCSGGGGLTSLSNNPPVAHPTPENTAGNGDQPLPPGPGWGPRSSL 1883
Query: 1926 GTQRTGRRKGRSQ-------------SVQAHSALSQRPP---MLSSSGP 1958
GR Q + + RPP +LSS GP
Sbjct: 1884 SGSGDGRPPPLLQWPPPRLPGPPPASPIPTEGPRTSRPPGPGLLSSEGP 1932
>gi|126723564 pecanex-like 1 [Homo sapiens]
Length = 2341
Score = 1496 bits (3873), Expect = 0.0
Identities = 810/1647 (49%), Positives = 1080/1647 (65%), Gaps = 77/1647 (4%)
Query: 460 TRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVSRLT---PDTGSESKVGKEGQTNLDP 516
+R S+ Q + S + ++ HS S E S + + G++S+ + +
Sbjct: 609 SRASSVQSAHQFSSDSSSSTTSHSCQSPEGRYSALKTKHTHKERGTDSEHTHKAHLVPEG 668
Query: 517 SSCK--------SSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPTSKSDLEAKEG 568
+S K ++ K ARVLS+DSGT L+ S+ + ++ K + TSKSDLEAKEG
Sbjct: 669 TSKKRATRRTSSTNSAKTRARVLSLDSGTVACLNDSNRLMAPESIKPLTTSKSDLEAKEG 728
Query: 569 QMPNESNFLEFVSLLESINTSKMTASSQL-----------NGSAEQNEESGLLRDNCSQE 617
++ +E + L S LE++ S+ + +Q+ +G+A+ +EE+ R S
Sbjct: 729 EVLDELSLLGRASQLETVTRSRNSLPNQVAFPEGEEQDAVSGAAQASEEAVSFRRERSTF 788
Query: 618 KKEEILENEKPSGHSSKQ----GKP-----DLQSQDHTSTGPACTQPAKTTAFFQGNRQR 668
+++ + + + G P Q Q T+ ++P A +
Sbjct: 789 RRQAVRRRHNAGSNPTPPTLLIGSPLSLQDGQQGQQSTAQVKVQSRPPSQAAVLSASASL 848
Query: 669 QIIYRVTSQQDSSVLQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSGNQKEGPLQ 728
+ ++ SV S S + ++H DE G+ S ++G +
Sbjct: 849 LV-------RNGSVHLEASHDNASA---VGGSSLH---DELGKFSSTLYETGGCDMSLVN 895
Query: 729 PLPS----NNDCLSQAREMQVSSSSTTTSESQDPSSGDPAVSALQQQLLLMVARRTQSET 784
P+ +N C + + VSSS++ D S + ++ LL + +
Sbjct: 896 FEPAARRASNICDTDSH---VSSSTSVRFYPHDVLS----LPQIRLNRLLTIDTDLLEQQ 948
Query: 785 PRHVSQDLEASSCSSTQGKFNREQFYKFIIFPGKWIKVWYDRLTLLALLDRTEDIKENVL 844
+S DL A+ + + + +Y+F I P WI + +DRLTLLAL DR +I ENVL
Sbjct: 949 DIDLSPDLAATYGPTEEAAQKVKHYYRFWILPQLWIGINFDRLTLLALFDRNREILENVL 1008
Query: 845 AILLIVLVSLLGFLTLSQGFCKDMWVLLFCLVMASCQYSLLKSVQPDPASPIHGHNQIIT 904
A++L +LV+ LG + L QGF +D+WV FCLV+ASCQYSLLKSVQPD +SP HGHN+II
Sbjct: 1009 AVILAILVAFLGSILLIQGFFRDIWVFQFCLVIASCQYSLLKSVQPDSSSPRHGHNRIIA 1068
Query: 905 YSRPIYFCVLCGLILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCFPAIS 964
YSRP+YFC+ CGLI LLD G++ + +YG+ +P+ SARD +IVF CFP +
Sbjct: 1069 YSRPVYFCICCGLIWLLDYGSRNLTATKFKLYGITFTNPLVFISARDLVIVFTLCFPIVF 1128
Query: 965 LLGLFPQINTFCTYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSAVKEP 1024
+GL PQ+NTF YL EQ+D+ FGG+A + + +A+YS S++A ALL+ +C+ A+K+
Sbjct: 1129 FIGLLPQVNTFVMYLCEQLDIHIFGGNATTSLLAALYSFICSIVAVALLYGLCYGALKDS 1188
Query: 1025 WSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAA---D 1081
W QHIP LFS FCGLLVA+SYHLSRQSSDPSVL S +Q ++FPK +N + + D
Sbjct: 1189 WDGQHIPVLFSIFCGLLVAVSYHLSRQSSDPSVLFSLVQSKIFPKTEEKNPEDPLSEVKD 1248
Query: 1082 PLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTH 1141
PLP+K+++SV++ L+ DL+VC V+ VL FA+ STVF L+P L VL+ L G VGFVTH
Sbjct: 1249 PLPEKLRNSVSERLQSDLVVCIVIGVLYFAIHVSTVFTVLQPALKYVLYTLVGFVGFVTH 1308
Query: 1142 YVLPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALIL 1201
YVLPQ+RK PW SHP+LK EY+Q EVR+ A +MWFE+L+VWL EK I+YP ++L
Sbjct: 1309 YVLPQVRKQLPWHCFSHPLLKTLEYNQYEVRNAATMMWFEKLHVWLLFVEKNIIYPLIVL 1368
Query: 1202 NALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYKD 1261
N L+ A I++ ++L T ++ +AG+KLLR+SF +P YQ++ + FTV+FF FDY+
Sbjct: 1369 NELSSSAETIASPKKLNTELGALMITVAGLKLLRSSFSSPTYQYVTVIFTVLFFKFDYEA 1428
Query: 1262 ISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLF 1321
SE+ LLD F +SILF+KL +LL+KLQFV TY+APWQ+ WGS+FH FAQ FA+PHSAMLF
Sbjct: 1429 FSETMLLDLFFMSILFNKLWELLYKLQFVYTYIAPWQITWGSAFHAFAQPFAVPHSAMLF 1488
Query: 1322 FQTIATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGND 1381
Q ++ FSTPL+PFLGS IFITSYVRPVKFWE++YNT+RVD+SNTRLA Q++R+PG+D
Sbjct: 1489 IQAAVSAFFSTPLNPFLGSAIFITSYVRPVKFWERDYNTKRVDHSNTRLASQLDRNPGSD 1548
Query: 1382 DNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLVT 1441
DNNLNSIFYEHLTR+LQ SLCGDL+LGRWGNYS+GDCFILASD LNA VHLIEIGNGLVT
Sbjct: 1549 DNNLNSIFYEHLTRSLQHSLCGDLLLGRWGNYSTGDCFILASDYLNALVHLIEIGNGLVT 1608
Query: 1442 FQLRGLEFRGTYCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEITQ 1501
FQLRGLEFRGTYCQQREVEAI EG EED G CCC+PGH+PH+LS NAAF RWL WE+
Sbjct: 1609 FQLRGLEFRGTYCQQREVEAITEGVEEDEGFCCCEPGHIPHMLSFNAAFSQRWLAWEVIV 1668
Query: 1502 TQYILEGYSILDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSLQ 1561
T+YILEGYSI DN+AA+MLQVFDLR++L YY+K IIYY+ TS KL W+ NE++ + L+
Sbjct: 1669 TKYILEGYSITDNSAASMLQVFDLRKVLTTYYVKGIIYYVTTSSKLEEWLANETMQEGLR 1728
Query: 1562 PFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDSD 1621
A +Y++ D FN NID+DY L GI+R SFC +YL WI++C+ +R +P +D D
Sbjct: 1729 LCADRNYVDVD-PTFNPNIDEDYDHRLAGISRESFCVIYLNWIEYCSSRRAKP---VDVD 1784
Query: 1622 EDSPLVTLSFALCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITA-RDEWVFADM 1680
+DS LVTL + LC LGRRALGTA+H+M+ +L+SFLYGLH LFKGDFRI++ RDEW+FADM
Sbjct: 1785 KDSSLVTLCYGLCVLGRRALGTASHHMSSNLESFLYGLHALFKGDFRISSIRDEWIFADM 1844
Query: 1681 DLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVL 1740
+LL KVV P IRMS+KLHQD FT PDEY+DP VLYEAI S EK +VI HEGDPAWR AVL
Sbjct: 1845 ELLRKVVVPGIRMSIKLHQDHFTSPDEYDDPTVLYEAIVSHEKNLVIAHEGDPAWRSAVL 1904
Query: 1741 SNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRN 1800
+N LL LRHV+D+G +EYK+IML+R +LSF+VIKVNKECVRGLWAGQQQEL+FLRNRN
Sbjct: 1905 ANSPSLLALRHVMDDGTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQQQELVFLRNRN 1964
Query: 1801 PERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRT 1860
PERGSIQN KQ LRN+INSSCDQP+GYP++VSPLTTSY +H QLK+I GGPI+L IR
Sbjct: 1965 PERGSIQNAKQALRNMINSSCDQPIGYPIFVSPLTTSYSDSHEQLKDILGGPISLGNIRN 2024
Query: 1861 WFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHG 1920
+ + W R+RK C A +SGGNIED D GG + GNNA + + S+ Q G G
Sbjct: 2025 FIVSTWHRLRKGCGAGCNSGGNIEDSDTGGGTSCTGNNATTANNPHSNVTQGSIGNPGQG 2084
Query: 1921 VSSCEGTQRTGRRKGRSQSVQAHSALS-------QRPPMLSSSGPILESRQTFLQTSTSV 1973
+ T S +HS S R + S S SR + L+ ST+
Sbjct: 2085 SGTGLHPPVTSYPPTLGTSHSSHSVQSGLVRQSPARASVASQSSYCYSSRHSSLRMSTTG 2144
Query: 1974 HELAQRLSGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSFLF 2033
+R S S++SL +S+ S+ V + A ++ L SS+SS+ S
Sbjct: 2145 FVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSG--QSGLACVQHGLPSSSSSSQSIPA 2202
Query: 2034 GKRSFSSALVISGLSAAEGGNTSDTQS 2060
K + G A EGG +S T +
Sbjct: 2203 CKHH-----TLVGFLATEGGQSSATDA 2224
Score = 131 bits (330), Expect = 6e-30
Identities = 70/173 (40%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 1 MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALHLAFPPNAIIV 60
M SQ LQ+LRQGVWAAL+GGWY+DP Q+ F N+ HLYLWLFLL LP L++A P IIV
Sbjct: 1 MGSQTLQILRQGVWAALSGGWYYDPHQATFVNALHLYLWLFLLGLPFTLYMALPSTMIIV 60
Query: 61 FFYCSAVTIFFTIIKLVSYRLHLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRNPS 120
YC + F ++K+V+YRLH D GEV+ + + E + K +G T ++ +
Sbjct: 61 AVYCPVIAAVFIVLKMVNYRLHRALDAGEVVDR--TANEFTDQRTKAEQGNCSTRRKDSN 118
Query: 121 NNRQIHNGKKEEASRNLSTPPLRCSSR----GQSITSHHSSGPLELSAQETVE 169
G + +TPP+ CSSR G ++ SG L T++
Sbjct: 119 GPSDPGGGIEMSEFIREATPPVGCSSRNSYAGLDPSNQIGSGSSRLGTAATIK 171
>gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo
sapiens]
Length = 938
Score = 74.7 bits (182), Expect = 9e-13
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 1683 LHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVLSN 1742
L ++ A R +LKL D+ + ED L + ++ +E+ I D W+ A+L
Sbjct: 784 LFQLALKAFRYTLKLMIDKASL-GPIEDFRELIKYLEEYERDWYIGLVSDEKWKEAILQE 842
Query: 1743 KEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRNPE 1802
K L +L + + G +V+ L L +V K+N E VRG WA EL++ N + E
Sbjct: 843 KPYLFSLGYDSNMGIYTGRVLSLQE--LLIQVGKLNPEAVRGQWANLSWELLYATNDDEE 900
Query: 1803 RGSIQNNKQVLRNLINSSCDQPLGYPMYVS 1832
R SIQ + +LRNL + + PLGYP+Y S
Sbjct: 901 RYSIQAHPLLLRNLTVQAAEPPLGYPIYSS 930
Score = 40.8 bits (94), Expect = 0.014
Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 21/203 (10%)
Query: 1268 LDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQL--FAIPHSAMLFFQTI 1325
L +V I+ +L + KLQF +T + A L I S + +
Sbjct: 288 LRLLLVGIIRDRLIQFISKLQFAVTVLLTSWTEKKQRRKTTATLCILNIVFSPFVLVIIV 347
Query: 1326 ATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGNDDNNL 1385
+++ S+PL P +F+ + RP++ W T ++T
Sbjct: 348 FSTLLSSPLLPLFTLPVFLVGFPRPIQSWPGAAGTTACVCADT----------------- 390
Query: 1386 NSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLVTFQLR 1445
++Y + L L + G G G ++ D ++ ++E G + ++
Sbjct: 391 --VYYYQMVPRLTAVLQTAMAAGSLGLLLPGSHYLGRFQDRLMWIMILECGYTYCSINIK 448
Query: 1446 GLEFRGTYCQQREVEAIMEGDEE 1468
GLE + T C E + E E+
Sbjct: 449 GLELQETSCHTAEARRVDEVFED 471
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 52.0 bits (123), Expect = 6e-06
Identities = 131/578 (22%), Positives = 200/578 (34%), Gaps = 115/578 (19%)
Query: 82 HLMFDKGEVIQQKPSRKEEKPNKDKEAKGEHITNHRN---------PSNNRQIHNGKKEE 132
H D G V ++ S E +D KG H+T+ N S + ++H K +
Sbjct: 37 HSGSDTGSV--ERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQKDSD 94
Query: 133 ASRNLSTPPLRCSSRGQSITSHHSSGPLELSAQETVEDLKGVILLEDHPIAPVSSTSPGI 192
+ P S + + H S E + + D + LL H +S S
Sbjct: 95 SESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGH-----ASDSENE 149
Query: 193 KVESLPASQAHMLETTTKSVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGP 252
V PAS + +E KS P TE + K + + + P RH++
Sbjct: 150 DVGKHPASDSE-IEELQKS--PASDSETEDAL--KPQISDSESEEPPRHQAS-------- 196
Query: 253 LKKLPHLSLSQYDLLETDVSFQPWGSENSVLIPEPVSCPRGSIRERVQSKSPQ--DSLSS 310
SEN EP PR S E + PQ DS S
Sbjct: 197 ------------------------DSENE----EPPK-PRMSDSESEELPKPQVSDSESE 227
Query: 311 SCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLIDTSQPGDPLSL 370
P+ ++ E P ++ S D P HQ DS + E+ I S+ DP
Sbjct: 228 EPPRHQASDSENEELPKP---RISDSESEDPPRHQASDSENEELPKPRISDSESEDP--- 281
Query: 371 HEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGSPNAEQISIPV 430
N +D E+ K V SD+E P + ++E
Sbjct: 282 ------------PRNQASDSENE------ELPKPRV-SDSESEGPQKGPASDSE------ 316
Query: 431 ITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPW 490
E PE + + + K + Q + S + K HSS S E
Sbjct: 317 -----TEDASRHKQKPESD--DDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEE 369
Query: 491 ESVSRLTPD----TGSESKVGKEGQTNLDPSSCKSSHEKRHARVLS--VDSGTDVFLSKS 544
++ D G E KV K L S + + +RV+S DS +D KS
Sbjct: 370 HKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKS 429
Query: 545 SAEIVNDTEKTMPTSKSDLEAKE-GQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQ 603
EKT+ + + KE NE L F S ES N + + S ++
Sbjct: 430 GKR-----EKTIASDSEEEAGKELSDKKNEEKDL-FGSDSESGNEEENLIADIFGESGDE 483
Query: 604 NEE--SGLLRDNCSQEKKEEILE--NEKPSGHSSKQGK 637
EE +G +++ +EK E ++ + S + K+GK
Sbjct: 484 EEEEFTGFNQEDLEEEKGETQVKEAEDSDSDDNIKRGK 521
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 48.1 bits (113), Expect = 9e-05
Identities = 84/462 (18%), Positives = 163/462 (35%), Gaps = 31/462 (6%)
Query: 301 SKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLID 360
S DS SS + D+ +K + +D+ + D+S DSSDS + D
Sbjct: 610 SSDSSDSSDSSDSKSDS--SKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSD 667
Query: 361 TSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGS 420
+S D + S + NS +SS + +S SD++ ++ + +
Sbjct: 668 SSDSSDSSDSS-------SSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSN 720
Query: 421 PNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIK 480
N+ N S+ + + S + S S ++
Sbjct: 721 SNSSD-------------------SDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761
Query: 481 DHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVF 540
+SS S + +S S+S + D S+ S + S S +D
Sbjct: 762 SNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Query: 541 LSKSSAEIVNDTEKTMPTSKSD-LEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNG 599
S S+ + ++ + + SD ++ +G + SN + + +S ++S + SS +
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSD 881
Query: 600 SAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTT 659
S++ NE S + S + + S SS S+ S+ + + + +
Sbjct: 882 SSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNS 941
Query: 660 AFFQGNRQRQIIYRVTSQQDSSVLQVISGPETSVQEEI--SVDAMHVFIDEHGEIRSCYL 717
+ + ++ DSS S +S + S D+ S
Sbjct: 942 SDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1001
Query: 718 KSGNQKEGPLQPLPSNNDCLSQAREMQVSSSSTTTSESQDPS 759
S + + SN+ S + + SS S+ +S+S D S
Sbjct: 1002 NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSS 1043
Score = 43.5 bits (101), Expect = 0.002
Identities = 64/325 (19%), Positives = 118/325 (36%), Gaps = 7/325 (2%)
Query: 448 GNGSERT---PERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSES 504
GNGS+ + + TN G+G GN D S S + +S + D+ + S
Sbjct: 502 GNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSS 561
Query: 505 KVGKEGQTNLDPSSCKSSHEKRHARVLSVDSG-TDVFLSKSSAEIVNDTEKTMPTSKSD- 562
++ D S SS + + S DS +D S +S++ + ++ + + SD
Sbjct: 562 --DSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDS 619
Query: 563 LEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEI 622
++K +ES+ + S +S +++ +S + S N + + S
Sbjct: 620 SDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSS 679
Query: 623 LENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTAFFQGNRQRQIIYRVTSQQDSSV 682
+ S SS S+ S+ + + + ++ N + DSS
Sbjct: 680 SSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSN 739
Query: 683 LQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSGNQKEGPLQPLPSNNDCLSQARE 742
S S S D+ S S + SN+ S +
Sbjct: 740 SSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSN 799
Query: 743 MQVSSSSTTTSESQDPSSGDPAVSA 767
SS+S+ +S+S D S D + S+
Sbjct: 800 SSDSSNSSDSSDSSDSSDSDSSNSS 824
Score = 40.0 bits (92), Expect = 0.024
Identities = 60/356 (16%), Positives = 125/356 (35%), Gaps = 5/356 (1%)
Query: 294 SIRERVQSKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSE 353
S R + S S S D+ + E +++S D+S D +SSDS
Sbjct: 856 SNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 915
Query: 354 VAVTLIDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPT 413
+ D+S+ + S++ +S +SS + +S SD+ +
Sbjct: 916 DSSNSSDSSESSNSSDNSNS----SDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDS 971
Query: 414 NPG-AAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGS 472
N ++ S N+ S + D + + S+ + + S + S S
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSS 1031
Query: 473 GEGGNAIKDHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHARVLS 532
++ SS S + +S S+S + + D S S E + S
Sbjct: 1032 DSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSS 1091
Query: 533 VDSGTDVFLSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEFVSLLESINTSKMT 592
S + S + +D+ + +S S + + S+ + + +S ++S+ +
Sbjct: 1092 NSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESS 1151
Query: 593 ASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQSQDHTST 648
SS + S++ ++ S + S + ++ S S D + +
Sbjct: 1152 DSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1207
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 47.8 bits (112), Expect = 1e-04
Identities = 88/408 (21%), Positives = 156/408 (38%), Gaps = 52/408 (12%)
Query: 385 NSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGG-GV 443
NSMT+L+ S + T +K ++P + A+G + + +T P
Sbjct: 282 NSMTELKPSSKAHL-----TKLKIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHT 336
Query: 444 PCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSE 503
PC + P + +Q S +G+GE +S+ + S S L D
Sbjct: 337 PC------KTEPSKFPFPTKESQQSNFGTGEQKRYNPSKTSNGHQ---SKSMLKDDLKLS 387
Query: 504 SKVGKEGQTNLDP----SSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPTS 559
S +G+ + D S+ S+ E H D+ D S S +E + ++ +S
Sbjct: 388 SSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESS 447
Query: 560 KSDLEAKEGQM-------PNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRD 612
SD EA E P +N + + L +N K++ +S ++ + ++ G ++
Sbjct: 448 SSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQ--GYKKE 505
Query: 613 NCSQEKKEEILENEKPSGHSSKQ-GKPDLQSQDHTSTGPACTQ-PAKTTAFFQ----GNR 666
Q + P SS G+ Q + +G + PA++ + Q G +
Sbjct: 506 GREQGTGNSYTDTSGPKETSSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKK 565
Query: 667 QRQIIYRVTSQQDSSVLQVISGPETSVQEEISVDAMHVFIDEHGEIRSCYLKSGNQKEGP 726
Q + + +++ L++ S ET V S+ + H K +KE
Sbjct: 566 QPKKAEKAAAEEPRGGLKIES--ETPVDLASSMPS-----SRHKAATKGSRKPNIKKESK 618
Query: 727 LQPLP--------SNNDCLSQAREM---QVSSSSTTTSESQDPSSGDP 763
P P S + ++RE+ SSS + SES PSS P
Sbjct: 619 SSPRPTAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSSQTP 666
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 45.1 bits (105), Expect = 8e-04
Identities = 101/493 (20%), Positives = 173/493 (35%), Gaps = 64/493 (12%)
Query: 93 QKPSRKEEKPNKDKEAKGEHITNHRNPSNNRQIHNGKKEEASRNLSTPPLRCSSRGQS-- 150
Q P P K A G + + P+++ + S +STP +R S G+
Sbjct: 726 QDPGGMSMSPMKSMTAGGMQMNS---PTSDVMSTPTVRAWTSETMSTPLMRTSDPGERPS 782
Query: 151 -ITSHHSSGPLELSAQETVEDLKGVILLEDHPIAPVSST-SPGIKVESLPASQAHMLETT 208
+T SSG + L AP S + ++ + A A + T
Sbjct: 783 LLTRASSSGEMSLPLMR----------------APASGEIATPLRSPAYGAMSAPQMTAT 826
Query: 209 TKSVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLKKLPH---LSLSQY- 264
++ P K G P R + GG+ PL + P S SQ
Sbjct: 827 ASGMMSSMPQV-------KAPISGAMSMPLTRSTASGGM--SMPLMRAPDSRVTSTSQMM 877
Query: 265 -----DLLETDVSFQPWGSENSVLIPEPVS------CPRGSIRERVQSKSPQDSLSS--S 311
D+ V G +S L+ P S R S E V ++ + S S S
Sbjct: 878 PTASGDMCTLPVRAPASGGVSSPLVRAPASGTMSTPLRRPSACETVSTELMRASASGHMS 937
Query: 312 CPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSSDSEVAVTLIDTSQPGDPLSLH 371
Q +V+ + +P + G +P+ + E+++ L++T G +L
Sbjct: 938 TAQTTAMVSGGMSKPL-----MRAPASGTMPMPLMSAMASGEMSMPLMETMASGATSTLQ 992
Query: 372 EPIKIVITMSSTPNSMTDL---------ESSLHLRVVGTEKTSVKSDAEPTNPGAAGSPN 422
+ +MS + + T S+ R + SV P A S
Sbjct: 993 TSVANSRSMSLSQTTYTVSGRMATAPIRASASGARSTSFMRASVSGSMPMPLPRATASGC 1052
Query: 423 AEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDH 482
+S+P +T G + G G+ TP+ +ST + SGE + +
Sbjct: 1053 GMGMSMPQMTATDSRGMSTPLMRASGPGTMSTPQTAFGVMSTPEIKATDSGEASTSHINI 1112
Query: 483 SSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSHEKRHAR-VLSVDSGTDVFL 541
++S +P ++ TP+T L P+ C E+ AR SV+ ++
Sbjct: 1113 TASGSKPTSHMTATTPETAKPPPKEVPSFGMLTPALCYLLEEQEAARGSCSVEEEMEIDE 1172
Query: 542 SKSSAEIVNDTEK 554
K ++D+E+
Sbjct: 1173 EKQMKGFLDDSER 1185
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 254 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 312
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 313 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 372
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 373 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 429
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 430 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 489
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 490 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 549
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 550 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 595
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 596 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 646
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 647 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 706
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 707 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 766
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 767 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 823
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 824 APAKESPRKGAAPTPPGKT 842
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 331 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 389
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 390 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 449
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 450 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 506
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 507 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 566
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 567 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 626
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 627 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 672
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 673 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 723
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 724 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 783
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 784 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 843
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 844 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 900
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 901 APAKESPRKGAAPTPPGKT 919
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 331 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 389
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 390 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 449
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 450 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 506
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 507 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 566
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 567 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 626
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 627 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 672
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 673 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 723
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 724 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 783
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 784 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 843
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 844 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 900
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 901 APAKESPRKGAAPTPPGKT 919
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 254 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 312
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 313 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 372
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 373 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 429
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 430 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 489
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 490 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 549
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 550 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 595
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 596 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 646
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 647 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 706
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 707 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 766
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 767 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 823
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 824 APAKESPRKGAAPTPPGKT 842
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 331 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 389
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 390 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 449
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 450 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 506
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 507 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 566
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 567 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 626
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 627 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 672
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 673 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 723
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 724 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 783
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 784 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 843
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 844 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 900
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 901 APAKESPRKGAAPTPPGKT 919
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 41.2 bits (95), Expect = 0.011
Identities = 124/619 (20%), Positives = 209/619 (33%), Gaps = 88/619 (14%)
Query: 98 KEEKPNKDKEAKGEHITN--HRNPSNNRQIH---NGKKEEASRNLSTPPLRCSSRGQSIT 152
K KP +D E+ E ++ P+ + +GK + S P +G +
Sbjct: 331 KAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGA-ASAPAKESPRKGAAPA 389
Query: 153 SHHSSGPLELSAQ--ETVEDLKGVILLEDHPIAPVSSTSPGIKVESLPASQAHMLETTTK 210
+GP AQ + ED + D + P K + A+ A E+ K
Sbjct: 390 PPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRK 449
Query: 211 SVIPVKPVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLK-----KLPHLSLSQYD 265
P P T + + GK + R SE D+ L ++ L S
Sbjct: 450 GAAPAPPRKTGP---AAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQV 506
Query: 266 LLETDVSFQPWGSENSVLIPEPVSCPRGSIR----ERVQSKSPQDSLSSSCPQCDTIVA- 320
+ + P G + P V S + E S ++S SS + T VA
Sbjct: 507 KPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAP 566
Query: 321 ------------KPVEEPADTSCQ----VDTSCQGDLPL------HQEVDSSDSEVAVTL 358
KP PA Q V + + P+ + DS+DSE A
Sbjct: 567 AQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAA 626
Query: 359 IDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDAEPTNPGAA 418
+ +Q L KI T + + T + + VGT+ P G A
Sbjct: 627 MTAAQAKPAL------KIPQTKACPKKTNTTASAKVAPVRVGTQA--------PRKAGTA 672
Query: 419 GSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTP---ERLKTRVSTNQCSGYGSGEG 475
SP ++ GG P + + SE + E+ V+ Q G G
Sbjct: 673 TSPAGSSPAV---------AGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGKGLQ 723
Query: 476 GNA----IKDHSSSSREP------WESVSRLTPDTGSESKVGKEGQTNLD----PSSCKS 521
A +K P +V+++ + +S+ +E + + P+ K+
Sbjct: 724 VKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKT 783
Query: 522 SHEKRHARVLSVDSGTDVFLSKSSA--EIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEF 579
S +K A+ + SA ++V + S S ++ N +
Sbjct: 784 SVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARG 843
Query: 580 VSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGKPD 639
+ + S+ + TA+ G E+SG + E++ E L KPSG + +
Sbjct: 844 PASVPSVGKAVATAAQAQTGP---EEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL 900
Query: 640 LQSQDHTSTGPACTQPAKT 658
+++ G A T P KT
Sbjct: 901 APAKESPRKGAAPTPPGKT 919
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 40.0 bits (92), Expect = 0.024
Identities = 81/369 (21%), Positives = 131/369 (35%), Gaps = 55/369 (14%)
Query: 164 AQETVEDLKGVILLEDHPIA-----PVSSTSPGIKVESLPASQAHML--ETTTKSVIPVK 216
+Q + + V++++DHP P S+ + E + Q L E K V
Sbjct: 1647 SQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVVSKKQQKRLQDEERRKKEEQVI 1706
Query: 217 PVATETLINGKGKERGGKGQPPLRHRSEGGLVDKGPLKKLPHLSLSQYDLLETDVSFQPW 276
V + N KG+ + K P + G+ +P L+ + P
Sbjct: 1707 QVWNKKNANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASA------------PL 1754
Query: 277 GSENSVLIPEPVSCPRGSIRERVQSKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTS 336
S +P S P + V + + +S+ + PV PA V S
Sbjct: 1755 PPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPV--PASPLAPVSAS 1812
Query: 337 CQGDLPLHQEVDSSDSEVAVTLIDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHL 396
+ V +S S A+T P S P I+ ++S TP S+T L S+
Sbjct: 1813 AS----VSASVPASTSAAAIT-----SSSAPASAPAPTPILASVS-TPASVTILASAS-- 1860
Query: 397 RVVGTEKTSVKSDAEPTNPGAAGSPNAEQISIPVITLDLP----------EGGGGGVPCP 446
+ +++ S + PT AA SP A I+ P I P P P
Sbjct: 1861 --IPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTP 1918
Query: 447 EGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESV---SRLTPDTGSE 503
+ P +T+ T++ N ++ S SS++P S+ S TP+
Sbjct: 1919 VSAPNPAPPAPAQTQAQTHK-------PVQNPLQTTSQSSKQPPPSIRLPSAQTPNGTDY 1971
Query: 504 SKVGKEGQT 512
GK QT
Sbjct: 1972 VASGKSIQT 1980
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 38.9 bits (89), Expect = 0.055
Identities = 55/201 (27%), Positives = 74/201 (36%), Gaps = 18/201 (8%)
Query: 355 AVTLIDTSQPGDPLS-LHEPIKIVITMSSTP-------NSMTDLESSLHLRVVGTEKTSV 406
A+T + G L L EP IT +S P MT + S G T+
Sbjct: 1718 AITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGASGMAGTTG 1777
Query: 407 KSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQ 466
DA T GAA +E+ P ++ + P GGG P G G+ + T VS
Sbjct: 1778 GVDAATT--GAASENTSERAGTPRVSGETPAVGGGSTPGEAGPGATVSG---STGVSAGS 1832
Query: 467 CSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSE--SKVGKEGQTNLDPSSCKSSHE 524
+ + G +A SS S SV T T SE S G G T S S
Sbjct: 1833 IT---ASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGSTAGSDS 1889
Query: 525 KRHARVLSVDSGTDVFLSKSS 545
+ A+ S L++ S
Sbjct: 1890 EITAKTSFTGSSPPGKLTRPS 1910
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 38.9 bits (89), Expect = 0.055
Identities = 71/352 (20%), Positives = 124/352 (35%), Gaps = 54/352 (15%)
Query: 291 PRGSIRERVQSKSPQDSLSSSCPQCDTIVAKPVEEPADTSCQVDTSCQGDLPLHQEVDSS 350
P GS + + ++P+DS S S + T P + A+ Q D+S + S
Sbjct: 50 PGGSTKSHPEPQTPKDSPSKSSAEAQTPEDTPNKSGAEAKTQKDSS-----------NKS 98
Query: 351 DSEVAVTLIDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSVKSDA 410
+E TS+ G + T ST S +L++ T K+ ++
Sbjct: 99 GAEAKTQKGSTSKSGS--------EAQTTKDSTSKSHPELQTPKD----STGKSGAEAQT 146
Query: 411 EPTNPGAAGSPNAEQISIP-------VITLDLPEGGGGGVPCPEGNGSERTPERLKTRVS 463
+P +G+ Q P T D+P G P+ S+ E +
Sbjct: 147 PEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPNKSGADGQTPKDGSSKSGAEDQTPKDV 206
Query: 464 TNQCSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPSSCKSSH 523
N+ SG KD S+ S + +G+E + K+ + P +
Sbjct: 207 PNK-----SGAEKQTPKDGSNKSGAEEQGPIDGPSKSGAEEQTSKDSPNKVVP---EQPS 258
Query: 524 EKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPTS-------KSDLEAKEGQMPNESNF 576
K H++ +S S L K+ + D K P + ++DL + + S
Sbjct: 259 RKDHSKPISNPSDNKE-LPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEVKSSEP 317
Query: 577 LEFVSLLESIN--------TSKMTASSQLNGSAEQNEESGLLRDNCSQEKKE 620
E V E+ + + +++GSA G L D+ EK +
Sbjct: 318 TEDVEPKEAEDDDTGPEEGSPPKEEKEKMSGSASSENREGTLSDSTGSEKDD 369
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 38.5 bits (88), Expect = 0.071
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 13/201 (6%)
Query: 447 EGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVS---RLTPD--TG 501
E S+ PE K R G E N + S S E + RL T
Sbjct: 1250 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTV 1309
Query: 502 SESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTE-KTMPTSK 560
S+ + G+E +T P K + +V S DS F +E V+++E + P ++
Sbjct: 1310 SDGESGEEKKTK--PKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTR 1367
Query: 561 SDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKE 620
S AK+ ++ + I + ++S + S E+ EE + +E++E
Sbjct: 1368 S---AKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKE--EEEEEEEEEE 1422
Query: 621 EILENEKPSGHSSKQGKPDLQ 641
E E+E S +G+ ++
Sbjct: 1423 EEEEDENDDSKSPGKGRKKIR 1443
Score = 32.0 bits (71), Expect = 6.7
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 33/270 (12%)
Query: 449 NGSERTPERLKT----RVSTNQCSGYGSGEG-GNAIKDHSSSSREPWESVSRLTPDTG-- 501
+G+E+ PER + + +G GE I+D +S ++ + + G
Sbjct: 976 DGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDS 1035
Query: 502 ---SESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPT 558
SE K K G + CK + R S T+ + K
Sbjct: 1036 CDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMKEDG-----------C 1084
Query: 559 SKSDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEK 618
+ SD K ++ N L NT ++ + S + + E +E++ + S +K
Sbjct: 1085 NSSDKRLKRIELRERRN------LSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKK 1138
Query: 619 KEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTAFFQGNRQRQIIYRVTSQQ 678
K I++ +K +S + + D TS+ + + + +G+ Q I VT
Sbjct: 1139 KAVIVKEKK---RNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVT--- 1192
Query: 679 DSSVLQVISGPETSVQEEISVDAMHVFIDE 708
++ VL +G S +E ++ V +D+
Sbjct: 1193 ENLVLSSHTGFCQSSGDEALSKSVPVTVDD 1222
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 38.5 bits (88), Expect = 0.071
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 13/201 (6%)
Query: 447 EGNGSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVS---RLTPD--TG 501
E S+ PE K R G E N + S S E + RL T
Sbjct: 1288 EDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTV 1347
Query: 502 SESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTE-KTMPTSK 560
S+ + G+E +T P K + +V S DS F +E V+++E + P ++
Sbjct: 1348 SDGESGEEKKTK--PKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTR 1405
Query: 561 SDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKE 620
S AK+ ++ + I + ++S + S E+ EE + +E++E
Sbjct: 1406 S---AKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKE--EEEEEEEEEE 1460
Query: 621 EILENEKPSGHSSKQGKPDLQ 641
E E+E S +G+ ++
Sbjct: 1461 EEEEDENDDSKSPGKGRKKIR 1481
Score = 32.0 bits (71), Expect = 6.7
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 33/270 (12%)
Query: 449 NGSERTPERLKT----RVSTNQCSGYGSGEG-GNAIKDHSSSSREPWESVSRLTPDTG-- 501
+G+E+ PER + + +G GE I+D +S ++ + + G
Sbjct: 1014 DGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDS 1073
Query: 502 ---SESKVGKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPT 558
SE K K G + CK + R S T+ + K
Sbjct: 1074 CDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMKEDG-----------C 1122
Query: 559 SKSDLEAKEGQMPNESNFLEFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEK 618
+ SD K ++ N L NT ++ + S + + E +E++ + S +K
Sbjct: 1123 NSSDKRLKRIELRERRN------LSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKK 1176
Query: 619 KEEILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTAFFQGNRQRQIIYRVTSQQ 678
K I++ +K +S + + D TS+ + + + +G+ Q I VT
Sbjct: 1177 KAVIVKEKK---RNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVT--- 1230
Query: 679 DSSVLQVISGPETSVQEEISVDAMHVFIDE 708
++ VL +G S +E ++ V +D+
Sbjct: 1231 ENLVLSSHTGFCQSSGDEALSKSVPVTVDD 1260
>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
Length = 2472
Score = 38.5 bits (88), Expect = 0.071
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 24/197 (12%)
Query: 454 TPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWE-------SVSRLTPDTGSESKV 506
TP +L + ++ + G +GGN + D SS + + +TG + +
Sbjct: 1980 TPVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNNEEMMIGEAMAETGHDGET 2039
Query: 507 GKEGQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIV---NDTEKTMPTSKSDL 563
EG T + K + + +D+ + S+ E + N TE SKS+
Sbjct: 2040 ENEGITT---KTSKPDEAETNMLTAEMDNFVCDTVEMSTEEGIIDANKTETNTEYSKSEE 2096
Query: 564 EAKEGQMPNESNFLEFVSLLESINTS-KMTASSQLNGSAEQNEESGLLRDNCSQEKKEE- 621
+ QM ES+ L+ E +TS K+ SQ S E + +N S +K E
Sbjct: 2097 KLDNNQMVMESDILQ-----EDHHTSQKVEEPSQCLASGTAISELIIEDNNASPQKLREL 2151
Query: 622 ----ILENEKPSGHSSK 634
+ N+ PSG ++
Sbjct: 2152 DPSLVSANDSPSGMQTR 2168
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 38.1 bits (87), Expect = 0.093
Identities = 108/538 (20%), Positives = 192/538 (35%), Gaps = 72/538 (13%)
Query: 184 PVSSTSPGIKVESLPASQAHMLETTTKSVIPVKPVATETLINGK-----GKERGGKGQPP 238
PVS+T +K +L A ++ T V+ + T+ ++ K R G P
Sbjct: 614 PVSNTH--VKTSNLAAPKSRKACVNTAQVLSFLELCTQQVLEAHIVRFWAKHRWGL---P 668
Query: 239 LRHRSEGGLVDKGPLKKLPHLSLSQYDLLETDVSFQPWGS--ENSVLIPEPVSCPRGSIR 296
LR + L+K+ LSL Q +D GS E + L+ EP P S+R
Sbjct: 669 LRVLKP---IQCFQLEKVSSLSLIQLAGPSSDTCESGAGSKVEVATLLGEP---PMASLR 722
Query: 297 ERVQSKSP---QDSLSSSCPQCDTIVAKPVEEPADT---SCQVDTSCQG----DLPLHQE 346
++V +K + L +S P C P P+ S + T+ Q PL
Sbjct: 723 KQVLTKPSVHMPERLQASSPACKQFQRAPRGIPSSNDHGSLKAPTAGQEGRWPSKPLTYS 782
Query: 347 VDSSDSEVAVTLIDTSQPGDPLSLHEPIKIVITMSSTPNSMTDLESSLHLRVVGTEKTSV 406
+ S + +S+ G+ + + N E + G K+S+
Sbjct: 783 LKGSTQQSRSLGAQSSRAGETREAVPQPTVPLGTCMRANLQATSEDVRGFKAPGASKSSL 842
Query: 407 ----------------KSDAEPTNPG-AAGSPNAEQISIPVITLDLPEGGGGGVPCPEGN 449
+ PG A S Q+S V+ L P+G VP N
Sbjct: 843 LPRMSVSQDPRKLCLMEEAVSEFEPGMATKSETQPQVSAAVVLL--PDGQASVVPHASEN 900
Query: 450 GSERTPERLKTRVSTNQCSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSESKVGKE 509
+ + P+ Q + G+ + + D S+ R P+ K
Sbjct: 901 LASQVPQ------GHLQSTPTGNMQASQELCDLMSARRSNMGHKEPRNPNCQGSCK---- 950
Query: 510 GQTNLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAEIV--NDTEKTMPTSKSDLEAKE 567
Q+ + P + H++ ++R +++ ++F + ++ TE T L +
Sbjct: 951 SQSPMFPPT----HKRENSRKPNLEKHEEMFQGLRTPQLTPGRKTEDTRQNEGVQLLPSK 1006
Query: 568 GQMPNESNFLEFVS-LLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKE------ 620
Q P+ S+F E + E+I + K + + +++ ++ S E +
Sbjct: 1007 KQPPSISHFGENIKQFFETIFSKKERKPAPVTAESQKTVKNRSCVYGSSAEAERLMTAVG 1066
Query: 621 EILENEKPSGHSSKQGKPDLQSQDHTSTGPACTQPAKTTAFFQGNRQRQIIYRVTSQQ 678
+I E H+ K + Q Q + P C P F + R + Y +SQQ
Sbjct: 1067 QIPEENMSLCHARHASKVNQQRQQFQA--PVCGFPCNHRHPFYSDHSRMLSYAASSQQ 1122
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 37.7 bits (86), Expect = 0.12
Identities = 30/83 (36%), Positives = 35/83 (42%), Gaps = 17/83 (20%)
Query: 1876 RQHSGGNIEDVDGG--GAPTTGGNNAPSGGSQESSAEQPRKGGAQHGVSSCEGTQRTGRR 1933
R HSGG GG G +GG APSGGS G G SSC G T
Sbjct: 2288 RNHSGGGGGGGSGGSGGGGGSGGGGAPSGGS-----------GHSGGPSSCGGAPST--- 2333
Query: 1934 KGRSQSVQAHSALSQRPPMLSSS 1956
RS+ + + PP+L SS
Sbjct: 2334 -SRSRPSRIPQPVRHHPPVLVSS 2355
>gi|10835159 plasminogen activator inhibitor-1 [Homo sapiens]
Length = 402
Score = 37.4 bits (85), Expect = 0.16
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 908 PIYFCVLCGLILLLDTGAKARHPPSYVV-----YGLKLFSPVFLQSARDYLIVFLYCFPA 962
P C++ GL L+ G+ HPPSYV +G+++F V Q+++D +VF +
Sbjct: 5 PALTCLVLGLALVFGEGSAVHHPPSYVAHLASDFGVRVFQQV-AQASKDRNVVF-SPYGV 62
Query: 963 ISLLGLFPQINTFCTYLLEQIDMLFFGGSAVSGITSAV-YSVARSVLAAALLHAVCFSAV 1021
S+L + Q+ T GG I +A+ + + +A AL H + +
Sbjct: 63 ASVLAML-QLTT--------------GGETQQQIQAAMGFKIDDKGMAPALRH--LYKEL 105
Query: 1022 KEPWSMQHIPALFSAF 1037
PW+ I + F
Sbjct: 106 MGPWNKDEISTTDAIF 121
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 37.4 bits (85), Expect = 0.16
Identities = 55/201 (27%), Positives = 73/201 (36%), Gaps = 18/201 (8%)
Query: 355 AVTLIDTSQPGDPLS-LHEPIKIVITMSSTP-------NSMTDLESSLHLRVVGTEKTSV 406
A+T + G L L EP IT +S P MT + S G T+
Sbjct: 1534 AITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGASGMAGTTG 1593
Query: 407 KSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQ 466
DA T GAA +E+ P ++ P GGG P G G+ + T VS
Sbjct: 1594 GVDAATT--GAASENTSERAGTPRVSGATPAVGGGSTPGEAGPGATVSG---STGVSAGS 1648
Query: 467 CSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSE--SKVGKEGQTNLDPSSCKSSHE 524
+ + G +A SS S SV T T SE S G G T S S
Sbjct: 1649 IT---ASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGSTAGSDS 1705
Query: 525 KRHARVLSVDSGTDVFLSKSS 545
+ A+ S L++ S
Sbjct: 1706 EITAKTSFTGSSPPGKLTRPS 1726
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 37.4 bits (85), Expect = 0.16
Identities = 55/201 (27%), Positives = 73/201 (36%), Gaps = 18/201 (8%)
Query: 355 AVTLIDTSQPGDPLS-LHEPIKIVITMSSTP-------NSMTDLESSLHLRVVGTEKTSV 406
A+T + G L L EP IT +S P MT + S G T+
Sbjct: 1718 AITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPTVTGASGMAGTTG 1777
Query: 407 KSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQ 466
DA T GAA +E+ P ++ P GGG P G G+ + T VS
Sbjct: 1778 GVDAATT--GAASENTSERAGTPRVSGATPAVGGGSTPGEAGPGATVSG---STGVSAGS 1832
Query: 467 CSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDTGSE--SKVGKEGQTNLDPSSCKSSHE 524
+ + G +A SS S SV T T SE S G G T S S
Sbjct: 1833 IT---ASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGSTAGSDS 1889
Query: 525 KRHARVLSVDSGTDVFLSKSS 545
+ A+ S L++ S
Sbjct: 1890 EITAKTSFTGSSPPGKLTRPS 1910
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 37.4 bits (85), Expect = 0.16
Identities = 42/158 (26%), Positives = 59/158 (37%), Gaps = 6/158 (3%)
Query: 1905 QESSAEQPRKGGAQHGVSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQ 1964
++S E+ R G A+ SS GTQ + H + ++P +SS SR
Sbjct: 517 KKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRS 576
Query: 1965 TFLQTSTSVHELA--QRLSGSRLSLHASATSLH---SQPPPVTTTGHLSVRERAEALIRS 2019
ST + +R GSR S + PPP T++ S RER R
Sbjct: 577 RSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRD 636
Query: 2020 SLGSSTSSTLSFLFG-KRSFSSALVISGLSAAEGGNTS 2056
GS S G KRS + + G+TS
Sbjct: 637 GGGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTS 674
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.4 bits (85), Expect = 0.16
Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 33/258 (12%)
Query: 415 PGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLKTRVSTNQCSGYGSGE 474
P AAGS + DL + G G+ E +G+ ++P++ + +
Sbjct: 2505 PPAAGSSEPKAPWPKATDGDLAQEPGPGLTF-EDSGNPKSPDKAQAE------------Q 2551
Query: 475 GGNAIKDHSSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPS------SCKSSHEKRHA 528
G + SSSS S S + +GSE++ +EG N D +C ++ + +
Sbjct: 2552 DGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAAS 2611
Query: 529 RVLSVDSGTDVFLSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFLEFVSLLESINT 588
S S + S SS+ + + + +S S + + S+ S S ++
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SSSSSSSS 2666
Query: 589 SKMTASSQLNGSAEQNEES------GLLRDNCSQEKKEEILENEKPSGHSSKQGKPDLQS 642
S ++++ + S ++E+ G K + +PS HS + P Q
Sbjct: 2667 SSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQP 2726
Query: 643 QDHTSTGPACTQPAKTTA 660
Q + P TQP + A
Sbjct: 2727 Q---APPPQPTQPLQPKA 2741
>gi|116256485 chromosome 6 open reading frame 10 [Homo sapiens]
Length = 563
Score = 37.4 bits (85), Expect = 0.16
Identities = 52/274 (18%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 400 GTEKTSVKSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGGGVPCPEGNGSERTPERLK 459
GT+ K E AG P ++ + + + +P+G G + P +
Sbjct: 280 GTDLEKDKIGMEVKVDSDAGIPKRQETQLKISEMSIPQGQGAQIK----KSVSDVPRGQE 335
Query: 460 TRVSTNQCSGYGSGEGGNAIKDH--SSSSREPWESVSRLTPDTGSESKVGKEGQTNLDPS 517
++V ++ SG G+ K +E S + ES+V K+ Q+ +
Sbjct: 336 SQVKKSE-SGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRRQESQV-KKSQSGVSKG 393
Query: 518 SCKSSHEKRHARVLSVDSGTDVFLSKSSAEIVNDTEKTMPTSKSDLEAKEGQMPNESNFL 577
++ +KR + VL G + + KS ++ E + +++D+ ++ +S
Sbjct: 394 Q-EAQVKKRESVVL---KGQEAQVEKSELKVPKGQEGQVEKTEADVPKEQEVQEKKSEAG 449
Query: 578 EFVSLLESINTSKMTASSQLNGSAEQNEESGLLRDNCSQEKKEEILENEKPSGHSSKQGK 637
+ ++++ L +++ ESG+L+ +QEKKE + G++ K+ +
Sbjct: 450 VLKGPESQVKNTEVSVPETLESQVKKS-ESGVLKGQEAQEKKESF----EDKGNNDKEKE 504
Query: 638 PDLQSQ-DHTSTGPACTQPAKTTAFFQGNRQRQI 670
D + + G T+ K +G R+ +I
Sbjct: 505 RDAEKDPNKKEKGDKNTKGDKGKDKVKGKRESEI 538
>gi|38569495 ELL associated factor 1 [Homo sapiens]
Length = 268
Score = 37.0 bits (84), Expect = 0.21
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 19/229 (8%)
Query: 333 VDTSCQGDLPLHQEVDSSDSEVAVTL--IDTSQP------GDPLSLHEPIKIVITMSSTP 384
+DTSC+G+L +V D EV +TL I S P G+ + ++I +
Sbjct: 42 IDTSCEGEL----QVGKGD-EVTITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGE 96
Query: 385 NSMTDLESSLHL---RVVGTEKTSVKSDAEPTNPGAAGSPNAEQISIPVITLDLPEGGGG 441
+ L SS+ + R G+ K + + +PT P P +P P G
Sbjct: 97 YVLEKLSSSIQVKKTRAEGSSKIQARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPK 156
Query: 442 GVPCPEGNGSERTPERLKTRVSTN-QCSGYGSGEGGNAIKDHSSSSREPWESVSRLTPDT 500
P + E + +K + S G++ D SSS +S S D
Sbjct: 157 TSPLKDNPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDN 216
Query: 501 GSESKVGKEGQT--NLDPSSCKSSHEKRHARVLSVDSGTDVFLSKSSAE 547
G S Q N P+ + + + L D+ LS+S ++
Sbjct: 217 GPASPPQPSHQQPYNSRPAVANGTSRPQGSNQLMNTLRNDLQLSESGSD 265
>gi|22325364 ubiquitin associated protein 2 [Homo sapiens]
Length = 1119
Score = 37.0 bits (84), Expect = 0.21
Identities = 52/183 (28%), Positives = 73/183 (39%), Gaps = 13/183 (7%)
Query: 1893 TTGGNNAPSGGSQESSAEQPRKGGA---QHGVSSCE---GTQRTGRRKGRSQSVQAHSAL 1946
T+ N+ S + SS +Q Q VSS E GT G GRSQ
Sbjct: 601 TSSSLNSASPVAMSSSYDQSSVHNRIPYQSPVSSSESAPGTIMNGHGGGRSQQTLDTPKT 660
Query: 1947 SQRPPMLSSSGPILESRQ-TFLQTSTSVHE---LAQRLS--GSRLSLHASATSLHSQPPP 2000
+ P L S + + T L STS H + LS S LS H S+ S H+
Sbjct: 661 TGPPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSS 720
Query: 2001 VTTTGHLSVRERAEALIRSSLGSSTSSTLSFLFGKRSFSSALVISGLSAAEGGNTSDTQS 2060
T+ H SV + ++ ++ +S S S SS++ + S GG + S
Sbjct: 721 STSHTHASVESASSHQSSATFSTAATSVSSSASSGASLSSSMNTAN-SLCLGGTPASASS 779
Query: 2061 SSS 2063
SSS
Sbjct: 780 SSS 782
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,698,539
Number of Sequences: 37866
Number of extensions: 3977723
Number of successful extensions: 15187
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 14549
Number of HSP's gapped (non-prelim): 839
length of query: 2137
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2019
effective length of database: 13,779,330
effective search space: 27820467270
effective search space used: 27820467270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.