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Search of human proteins with 134142813
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134142813 E2F transcription factor 5 isoform 3 [Homo
sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens] 374 e-104
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 374 e-104
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 368 e-102
gi|12669915 E2F transcription factor 4 [Homo sapiens] 157 5e-39
gi|4758226 E2F transcription factor 2 [Homo sapiens] 72 3e-13
gi|4503433 E2F transcription factor 3 [Homo sapiens] 60 8e-10
gi|12669911 E2F transcription factor 1 [Homo sapiens] 56 2e-08
gi|109637795 E2F transcription factor 6 [Homo sapiens] 49 3e-06
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 33 0.11
gi|11641239 hypothetical protein LOC53838 [Homo sapiens] 33 0.14
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 32 0.24
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 32 0.24
gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sap... 32 0.31
gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sap... 32 0.31
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 31 0.53
gi|56549696 E1A binding protein p400 [Homo sapiens] 31 0.53
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 31 0.53
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 31 0.53
gi|40807465 zinc finger protein 341 [Homo sapiens] 31 0.53
gi|5453952 beta isoform of regulatory subunit B56, protein phosp... 31 0.53
gi|150378498 fragile site-associated protein [Homo sapiens] 31 0.69
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens] 30 0.91
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 30 0.91
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 30 0.91
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 30 1.2
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 30 1.2
gi|153792110 HEG homolog 1 [Homo sapiens] 30 1.2
gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapi... 30 1.2
gi|16933557 dachsous 1 precursor [Homo sapiens] 30 1.2
gi|58530845 zyxin [Homo sapiens] 30 1.5
>gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens]
Length = 185
Score = 374 bits (960), Expect = e-104
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 60
MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
Sbjct: 1 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 60
Query: 61 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 120
GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS
Sbjct: 61 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 120
Query: 121 QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 180
QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV
Sbjct: 121 QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 180
Query: 181 QILNY 185
QILNY
Sbjct: 181 QILNY 185
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 374 bits (960), Expect = e-104
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 60
MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
Sbjct: 162 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 221
Query: 61 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 120
GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS
Sbjct: 222 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 281
Query: 121 QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 180
QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV
Sbjct: 282 QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 341
Query: 181 QILNY 185
QILNY
Sbjct: 342 QILNY 346
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 368 bits (944), Expect = e-102
Identities = 184/185 (99%), Positives = 184/185 (99%), Gaps = 1/185 (0%)
Query: 1 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 60
MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
Sbjct: 162 MDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS 221
Query: 61 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 120
GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS
Sbjct: 222 GPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERS 281
Query: 121 QALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 180
QALQQTSATDISS GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV
Sbjct: 282 QALQQTSATDISS-GSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDV 340
Query: 181 QILNY 185
QILNY
Sbjct: 341 QILNY 345
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 157 bits (397), Expect = 5e-39
Identities = 111/284 (39%), Positives = 139/284 (48%), Gaps = 102/284 (35%)
Query: 2 DDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSG 61
+D N+ +YVTHEDIC CF GDTLLAI+APSGT LEVPIPE G NGQKKYQI+LKS SG
Sbjct: 130 EDVQNSCLAYVTHEDICRCFAGDTLLAIRAPSGTSLEVPIPE-GLNGQKKYQIHLKSVSG 188
Query: 62 PIHVLLINKESSSSKPVVFPVP---------------PP---------DDLTQPSSQSLT 97
PI VLL+NKE+ SS PV PVP PP + ++P+S LT
Sbjct: 189 PIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLT 248
Query: 98 PV-------------------------TPQKSSMATQNLPEQHVSERSQALQQTSATDIS 132
P T K S +LP + ++ LQ ++ D S
Sbjct: 249 PTAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSS 308
Query: 133 SAGS--------------------------------------------------ISGDII 142
S+ S +S +++
Sbjct: 309 SSSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELL 368
Query: 143 DELMSSDVF-PLLRLSPTPAD-DYNFNLDDNEGVCDLFDVQILN 184
+ELMSS+VF PLLRLSP P D DY +NLD++EGVCDLFDV +LN
Sbjct: 369 EELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFDVPVLN 412
>gi|4758226 E2F transcription factor 2 [Homo sapiens]
Length = 437
Score = 72.0 bits (175), Expect = 3e-13
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 2 DDSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
+D N R +YVT++DI F T++A++AP T+LEVP + QI LKS
Sbjct: 240 EDKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVP-----DRTEDNLQIYLKST 294
Query: 60 SGPIHVLLINKE-SSSSKPVVFPVP------PPDDLTQPSSQSLTPVTPQKSSMATQNLP 112
GPI V L +E P P+P P D QPSS + + +S P
Sbjct: 295 QGPIEVYLCPEEVQEPDSPSEEPLPSTSTLCPSPDSAQPSSSTDPSIMEPTASSVPAPAP 354
Query: 113 EQHVSERSQALQQTSATD--ISSAGSISGDIIDELMSSDV---FPLLRLSPT-PADDYNF 166
+ +L ATD + + D+ +S + PL+ SP+ DDY +
Sbjct: 355 TPQQAPPPPSLVPLEATDSLLELPHPLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLW 414
Query: 167 NLDDNEGVCDLFD 179
L+ EG+ DLFD
Sbjct: 415 GLEAGEGISDLFD 427
>gi|4503433 E2F transcription factor 3 [Homo sapiens]
Length = 465
Score = 60.5 bits (145), Expect = 8e-10
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 2 DDSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
+DS N R +YVT++DI + T++ ++AP T+LEVP + + QI+L S
Sbjct: 289 EDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVP------DSIESLQIHLAST 342
Query: 60 SGPIHVLLINKESSSSKPVVFPVPPPD-DLTQPSSQSLTPVTPQKSSMATQNLPEQHVSE 118
GPI V L +E+ + P+ + ++ +P+S+ L S + ++
Sbjct: 343 QGPIEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLAS 402
Query: 119 RSQALQQTSATDISSAGSISGDIIDELMSSDVFPLLRL-SPTPADDYNFNLDDNEGVCDL 177
+ LQQT D++ S+ P + L P +DY +L + EG+ DL
Sbjct: 403 PANLLQQTE---------------DQIPSNLEGPFVNLLPPLLQEDYLLSLGEEEGISDL 447
Query: 178 FD 179
FD
Sbjct: 448 FD 449
>gi|12669911 E2F transcription factor 1 [Homo sapiens]
Length = 437
Score = 56.2 bits (134), Expect = 2e-08
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 43/206 (20%)
Query: 2 DDSINNRFSYVTHEDICNCFNG--DTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
+D+ + R +YVT +D+ + + ++ I+AP TQL+ + + +QI+LKS
Sbjct: 236 EDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAV------DSSENFQISLKSK 289
Query: 60 SGPIHVLLINKES----------------------SSSKPVVFPVP--PPDDLTQPSSQS 95
GPI V L +E+ + S +V P P PP LT SQS
Sbjct: 290 QGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQS 349
Query: 96 LTPVT--PQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPL 153
L + P S M + P +R L + SG + +E +S
Sbjct: 350 LLSLEQEPLLSRMGSLRAPVDE--DRLSPLVAADSLLEHVREDFSGLLPEEFISLS---- 403
Query: 154 LRLSPTPADDYNFNLDDNEGVCDLFD 179
P A DY+F L++ EG+ DLFD
Sbjct: 404 ---PPHEALDYHFGLEEGEGIRDLFD 426
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 48.5 bits (114), Expect = 3e-06
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 2 DDSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
DD N R +YVT++DI F+ ++A++AP+ T+L+VP P + ++++S
Sbjct: 173 DDKENERLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR-----EDSITVHIRST 227
Query: 60 SGPIHVLLI--------NKES----SSSKPVVFPVPPPDDLTQPSSQSLTPVT 100
+GPI V L NK S +SS P P ++ S+ L V+
Sbjct: 228 NGPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVS 280
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 33.5 bits (75), Expect = 0.11
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL--PEQHVSERSQALQQTSATDISSAGS 136
P+PP D+L PS + LTP+ P A N+ P +H+ R + + D+ S S
Sbjct: 548 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHLQFRFHPQRMIISRDLPSVSS 607
Query: 137 I 137
+
Sbjct: 608 L 608
Score = 29.6 bits (65), Expect = 1.5
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSIS 138
P+PP D+L PS + LTP+ P A N+ + +ER + SA D S
Sbjct: 933 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNI--KTPAERLRGPLPPSADDNLKTPS-- 988
Query: 139 GDIIDELMSSDVFPLLRLSPTPADD 163
+ PL +PT ADD
Sbjct: 989 --------ERQLTPLPPSAPTSADD 1005
Score = 28.9 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL--PEQHV 116
P+PP D+L PS + LTP+ P A N+ P +H+
Sbjct: 380 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHL 419
Score = 28.9 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL--PEQHV 116
P+PP D+L PS + LTP+ P A N+ P +H+
Sbjct: 464 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAEHL 503
Score = 28.5 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 78 VVFPVPPP--DDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATD 130
++ P+PP D+L PS + LTP+ P A N+ + +ER + SA D
Sbjct: 335 LLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNI--KTTAERLRGPLPPSADD 387
Score = 28.1 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL 111
P+PP D+L PS + LTP+ P + A N+
Sbjct: 975 PLPPSADDNLKTPSERQLTPLPPSAPTSADDNI 1007
Score = 27.3 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL 111
P+PP D+L PS + LTP+ P A N+
Sbjct: 422 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNI 454
Score = 27.3 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL 111
P+PP D+L PS + LTP+ P A N+
Sbjct: 506 PLPPSADDNLKTPSERQLTPLPPSAPPSADDNI 538
Score = 27.3 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 81 PVPPP--DDLTQPSSQSLTPVTPQKSSMATQNL 111
P+PP D+L PS + LTP+ P A N+
Sbjct: 891 PLPPSADDNLKTPSKRQLTPLPPSAPPSADDNI 923
>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
Length = 449
Score = 33.1 bits (74), Expect = 0.14
Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 18/130 (13%)
Query: 24 DTLLAIQAPSGTQLEVPIPEMG--------QNGQKKYQINLKSHSGPIHVLLINKESSSS 75
DT + P Q + PI ++ N N P ++ ++ +
Sbjct: 240 DTAASPVPPMRPQAQGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAR 299
Query: 76 KPVVFPVPPPDDLTQPSSQSLTPVTPQKSSM---------ATQNLPEQHVSERSQALQQT 126
+P PVP P P ++++P T Q S M T PEQ +E + T
Sbjct: 300 EPTASPVPVPHTSPIPEMEAMSPTT-QPSPMPYTQRAAGPGTSQAPEQVETEATPGTDST 358
Query: 127 SATDISSAGS 136
T SS G+
Sbjct: 359 GPTPRSSGGT 368
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor
[Homo sapiens]
Length = 1584
Score = 32.3 bits (72), Expect = 0.24
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 94 QSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPL 153
+++ +T + + A + LP + VSE Q L + S S +G + I +++F
Sbjct: 640 RNIQMMTREHLAKAQRGLPGEGVSEVIQTLVEISQDGTSYSGDLLSTIDVLRNMTEIFRR 699
Query: 154 LRLSPTPADDYNF 166
SPTP D NF
Sbjct: 700 AYYSPTPGDVQNF 712
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 32.3 bits (72), Expect = 0.24
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 31 APSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQ 90
+P G Q + + ++ +I+L+S V+L+N +SSS V P +
Sbjct: 425 SPMGVQAREESSDSAEENDRRVEIHLESSDKEKPVMLLNHFTSSSARPTAQVLPVQNEAS 484
Query: 91 PSSQSLTPVTPQKSSMATQNLP-----EQHVSERSQALQQTSATDISSAGSI 137
+ P+ PQ S A+ P H ER A + ++ + S S+
Sbjct: 485 SNPSGHHPLPPQMLSAASHITPIRMLNSVHKPERGSADMKLLSSSVHSLLSL 536
>gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo
sapiens]
Length = 1233
Score = 32.0 bits (71), Expect = 0.31
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 72 SSSSKPVVFPVPPPDDLTQPSSQSL-TPVTPQKSSMA 107
SS+S P P P PD + P+ S PV PQ S MA
Sbjct: 385 SSASSPAPDPAPEPDPASAPAPASAPAPVVPQPSKMA 421
>gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo
sapiens]
Length = 1268
Score = 32.0 bits (71), Expect = 0.31
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 72 SSSSKPVVFPVPPPDDLTQPSSQSL-TPVTPQKSSMA 107
SS+S P P P PD + P+ S PV PQ S MA
Sbjct: 420 SSASSPAPDPAPEPDPASAPAPASAPAPVVPQPSKMA 456
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 31.2 bits (69), Expect = 0.53
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 79 VFPVPPPDDLTQPSSQSLTPVTP 101
V P+PPPDDL P PV P
Sbjct: 3496 VVPIPPPDDLVAPEPPDEVPVVP 3518
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 79 VFPVPPPDDLTQPSSQSLTPVTPQKSS 105
V PV PPDDL P + + PV P S+
Sbjct: 898 VIPVTPPDDLVVPVTPTDCPVAPVTSA 924
Score = 28.1 bits (61), Expect = 4.5
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 79 VFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGS-- 136
VFPV P DD P S + +PV P + N+P V + S ++SAGS
Sbjct: 2295 VFPVTPADDPIFPVSPADSPVVP----VTPANIPVVPVPPAN-----GSVVPVTSAGSPF 2345
Query: 137 ---ISGDIIDELMSSDVFPLLRLSPT 159
I D + L SS ++ +SPT
Sbjct: 2346 VPIIPADGLVVLDSSTDVLVVLVSPT 2371
Score = 27.7 bits (60), Expect = 5.9
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 65 VLLINKESSSSKPV------VFPVPPPDDL---TQPSSQSLTPVTPQKSS---MATQNLP 112
V+ +N S PV V PV P D L P+ + PVTP S + + + P
Sbjct: 1645 VVSVNPADGSVVPVTSADCPVVPVTPADGLVVPVTPADSPIVPVTPADSPVVLVTSADSP 1704
Query: 113 EQHVSERSQALQQTSATDISSAG----SISGDIIDELMSSDVFPLLRLSPTPAD 162
V+ + ++ D S G S G ++ + S+D P + TPAD
Sbjct: 1705 VIPVTPADSPVVPVTSADTDSPGSPVTSADGPVV-PVTSADSLP---VPVTPAD 1754
Score = 27.7 bits (60), Expect = 5.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 79 VFPVPPPDDLTQPSSQSLTPVTP 101
VFPV P DDL P + +PV P
Sbjct: 2604 VFPVSPADDLVVPVTPGDSPVVP 2626
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 31.2 bits (69), Expect = 0.53
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 15/116 (12%)
Query: 30 QAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLT 89
Q + T +V +P++ Q QI P H++ + K+ K + P PPP
Sbjct: 2745 QQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQ----KLQMPPQPPP---- 2796
Query: 90 QPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDEL 145
P +QS P + + T P+Q Q+ Q T+ T ++G + L
Sbjct: 2797 -PQAQSAPPQPTAQVQVQTSQPPQQ------QSPQLTTVTAPRPGALLTGTTVANL 2845
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 31.2 bits (69), Expect = 0.53
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 23/147 (15%)
Query: 40 PIPEMGQNGQKKYQINLKS-HSGPIHVLLINKE-------SSSSKP-------VVFPVPP 84
PIPE+ + +++ Q S + + +E S+ +P + FP PP
Sbjct: 3199 PIPEVSEESEEEEQAKSTSLKQTTVEETAVEREMPNDVSKDSNQRPKNNRVAYIEFPPPP 3258
Query: 85 PDDLTQPSSQSLTPVTPQKS-SMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIID 143
P D Q S P+K M NL ++H ++ Q + S D+ D
Sbjct: 3259 PLDADQIESDKKHHYLPEKEVDMIEVNLQDEH--DKYQLAEPVIRVQPPSPVPPGADVSD 3316
Query: 144 ELMSSDVFPLLRLSPTPADDYNFNLDD 170
++ P P Y F L +
Sbjct: 3317 SSDDESIY-----QPVPVKKYTFKLKE 3338
Score = 27.3 bits (59), Expect = 7.7
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 36 QLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQS 95
+L+ P + K+Y + S P VLL +S+ + V PD P ++
Sbjct: 2605 ELQSPEKKARPKNGKEYSSQSPTSSSPEKVLLTELLASNDEWVKARQHGPDGQGFPKAEE 2664
Query: 96 LT---PVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAG 135
P +P+K ++ Q + E ++ Q+ A D +G
Sbjct: 2665 KAPSLPSSPEKMVLSQQTEDSKSTVEAKGSISQSKAPDGPQSG 2707
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 31.2 bits (69), Expect = 0.53
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 28 AIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDD 87
AI APS P+P + + L S P+ V+ + +S PVP P
Sbjct: 1596 AILAPSPAPPLAPLPVLAPSPGAAPV--LASSQTPVPVMAPSSTPGTSLASASPVPAPTP 1653
Query: 88 LTQPSS-QSLTPV---TPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIID 143
+ PSS Q++ P +P S +TQ L + S T G+ G
Sbjct: 1654 VLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPT 1713
Query: 144 ELMSSDVFPLLRLSPTPA 161
+ +S + P L PTPA
Sbjct: 1714 QTLS--LTPASSLVPTPA 1729
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 31.2 bits (69), Expect = 0.53
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 19 NCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPV 78
N D +L + T L+ P+P+ G Q +L HS P + L P
Sbjct: 133 NILVSDDVLMSAMSAFTSLDQPMPQ----GPPPVQSSLNMHSVPSY--LTQPPPPPPPPP 186
Query: 79 VFPVPPPDDLTQPSSQSLTP 98
P PPP P QSL P
Sbjct: 187 PLPPPPPPQPPPPPPQSLGP 206
>gi|5453952 beta isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 497
Score = 31.2 bits (69), Expect = 0.53
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 72 SSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQ 109
+S S P + PVPPPD + S +SL P++S ++Q
Sbjct: 12 TSPSSPGLSPVPPPDKVDGFSRRSLRRARPRRSHSSSQ 49
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 30.8 bits (68), Expect = 0.69
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 54 INLKSHSGPIHVLLINKESSSSK--------PVVFPVPPPDDLTQPSSQSLTPVTPQKSS 105
IN+ H +H +++ SK P P P +D+ P TP + ++
Sbjct: 2899 INIPQHPATLHSMMVRSSHQLSKQISDLIRQPSTAPQPVKEDIATPLPSEKTPTSVNQTP 2958
Query: 106 MATQNLPE 113
+ T P+
Sbjct: 2959 VETNEFPQ 2966
>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
Length = 5795
Score = 30.4 bits (67), Expect = 0.91
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 27 LAIQAPSGTQLEVPIPEMG-----QNGQKKYQINLKSHSGPIHVLLINKESSSSKP---- 77
LA++ PSG+Q ++P+P+ Q + +SHSGP++ ++ S P
Sbjct: 4808 LALEIPSGSQADIPLPKTECSTDLQPPEGVPTSQAESHSGPLNSMIPVSLGQVSFPKFYK 4867
Query: 78 --VVFPVP----PPDDL----TQPSSQSLTPVTPQKSSMATQNLPEQH--VSERSQALQQ 125
VF VP P DL P L+P + + + LP VS+ + L
Sbjct: 4868 PKFVFSVPQMAVPEGDLHAAVGAPVMSPLSPGERVQCPLPSTQLPSPGTCVSQGPEELVA 4927
Query: 126 TSATDISSAGSISGDIID 143
+ T + + G + D
Sbjct: 4928 SLQTSVVAPGEAPSEDAD 4945
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 30.4 bits (67), Expect = 0.91
Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 42 PEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQ---------PS 92
PE +G+ Y N S P+H +K P+ P P P + PS
Sbjct: 2280 PESMLSGKSSYLPN----SDPLHQSDTSKAPGFRPPLQRPAPSPSGIVNMDSPYGSVTPS 2335
Query: 93 S-------------QSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISG 139
S Q P P + A N QH S S +SA++ SSA S+S
Sbjct: 2336 STHLGNFASNISGGQMYGPGAPLGGAPAAANFNRQHFSPLSLLTPCSSASNDSSAQSVSS 2395
Query: 140 DI 141
+
Sbjct: 2396 GV 2397
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 30.4 bits (67), Expect = 0.91
Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 42 PEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQ---------PS 92
PE +G+ Y N S P+H +K P+ P P P + PS
Sbjct: 2029 PESMLSGKSSYLPN----SDPLHQSDTSKAPGFRPPLQRPAPSPSGIVNMDSPYGSVTPS 2084
Query: 93 S-------------QSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISG 139
S Q P P + A N QH S S +SA++ SSA S+S
Sbjct: 2085 STHLGNFASNISGGQMYGPGAPLGGAPAAANFNRQHFSPLSLLTPCSSASNDSSAQSVSS 2144
Query: 140 DI 141
+
Sbjct: 2145 GV 2146
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 30.0 bits (66), Expect = 1.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 49 QKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMAT 108
Q+ + L S P H + SS+ FP PS+ + PVTP+ +S AT
Sbjct: 1087 QEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQAT 1146
Query: 109 QN 110
++
Sbjct: 1147 RS 1148
Score = 29.3 bits (64), Expect = 2.0
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 69 NKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSA 128
N+ S + V P P QPS+ + PVTP+ +S AT+ ++ + + + T A
Sbjct: 1438 NRSSVKTPETVVPTAPE---LQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPT-A 1493
Query: 129 TDISSAGSISGDIIDE 144
++ ++ S + E
Sbjct: 1494 PELQASASTDQPVTSE 1509
Score = 27.7 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 69 NKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQ 109
N+ S + V P P QPS+ + PVTP+ +S AT+
Sbjct: 1520 NRSSVKTPETVVPAAPE---LQPSTSTDQPVTPEPTSRATR 1557
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 30.0 bits (66), Expect = 1.2
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 13/109 (11%)
Query: 32 PSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQP 91
PSG+ M Q Q+ Y+ + GP + + ++ VP QP
Sbjct: 1349 PSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP--------PAKRHEGEMYSVPYSTGQGQP 1400
Query: 92 SSQSLTPVTPQKSS--MATQNLPEQHVSER---SQALQQTSATDISSAG 135
Q L P PQ +S A Q P+Q V + + T+AT+ AG
Sbjct: 1401 QQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAG 1449
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 30.0 bits (66), Expect = 1.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 67 LINKESSSSKPVVFPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQT 126
L++ + S+K V P P LT+ S++ P T + + + + SQ L T
Sbjct: 798 LVSLPTESTKAVTTNSPLPPSLTESSTEQTLPATSTNLAQMSPTFTTT-ILKTSQPLMTT 856
Query: 127 SATDISSAGSISGDI 141
T S+A ++G I
Sbjct: 857 PGTLSSTASLVTGPI 871
>gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapiens]
Length = 1188
Score = 30.0 bits (66), Expect = 1.2
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 41 IPEMGQNGQKKYQINLKSHSGPIHVLLIN--KESSSSKPVVFPVPPPDDL-----TQPSS 93
+ M +G KKY +L P HV L N K P++ P ++ + S
Sbjct: 957 VSPMTMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSL 1016
Query: 94 QSLTPVTPQKSSMATQNL-PEQHVSERSQALQQTSATDISSAGSISGDIIDE---LMSSD 149
+ L V K + A L P + VS + +A +Q S ++ G SG + +SS
Sbjct: 1017 EDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSP 1076
Query: 150 VFP 152
+FP
Sbjct: 1077 IFP 1079
>gi|16933557 dachsous 1 precursor [Homo sapiens]
Length = 3298
Score = 30.0 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 23 GDTLLAIQAPSG------TQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSK 76
G L+++ P G T L P++G NGQ +Y+I SG + L + E + +
Sbjct: 1752 GSAHLSLEVPEGQDPQTLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMR 1811
Query: 77 PVVFPVPP 84
P+ V P
Sbjct: 1812 PLDREVEP 1819
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 29.6 bits (65), Expect = 1.5
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 30 QAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVF----PVPPP 85
++PS +Q P+P++ Q + Q +++ P + ++ +S + +PV P PP
Sbjct: 201 KSPSSSQ---PLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQT-QPVSLANTQPRGPP 256
Query: 86 DDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGS 136
P+ + +PVTP+ + +A++ P SQ Q+ + SAG+
Sbjct: 257 ASSPAPAPK-FSPVTPKFTPVASKFSPGAPGGSGSQPNQKLGHPEALSAGT 306
Score = 28.9 bits (63), Expect = 2.6
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 38 EVPIPEMGQNGQKKYQINLK--SHSGPIHVLLIN---KESSSSKPVVFPVPPP---DDLT 89
E PIP Q +K I+L+ S S + + N K SS V PV P T
Sbjct: 128 EAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPFSSKSST 187
Query: 90 QPSSQSLTPVTPQKSSMATQNLPEQHVSERSQ 121
+P++ P+ P KS ++Q LP+ +SQ
Sbjct: 188 KPAAGGTAPLPPWKSPSSSQPLPQVPAPAQSQ 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,752,901
Number of Sequences: 37866
Number of extensions: 361370
Number of successful extensions: 1796
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1661
Number of HSP's gapped (non-prelim): 226
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.