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Search of human proteins with 55925614
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55925614 interferon, alpha-inducible protein 27 isoform 2
[Homo sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55925614 interferon, alpha-inducible protein 27 isoform 2 [Ho... 213 4e-56
gi|194272171 interferon, alpha-inducible protein 27 isoform 1 [H... 207 1e-54
gi|14042964 TLH29 protein precursor [Homo sapiens] 106 4e-24
gi|46048520 interferon, alpha-inducible protein 27-like 1 [Homo ... 97 3e-21
gi|21699070 interferon, alpha-inducible protein 27-like 1 [Homo ... 97 3e-21
gi|13259550 interferon, alpha-inducible protein 6 isoform c [Hom... 72 1e-13
gi|13259548 interferon, alpha-inducible protein 6 isoform b [Hom... 72 1e-13
gi|13259552 interferon, alpha-inducible protein 6 isoform a [Hom... 72 1e-13
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ... 36 0.006
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ... 36 0.006
gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo ... 33 0.038
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 33 0.050
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 33 0.050
gi|14149631 ring finger protein 112 [Homo sapiens] 33 0.065
gi|161019170 mucin 5AC [Homo sapiens] 32 0.11
gi|98986457 host cell factor 1 [Homo sapiens] 32 0.11
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 32 0.11
gi|33620755 YEATS domain containing 2 [Homo sapiens] 31 0.25
gi|239752780 PREDICTED: hypothetical protein [Homo sapiens] 30 0.32
gi|239747286 PREDICTED: hypothetical protein XP_002346424 [Homo ... 30 0.32
gi|239741110 PREDICTED: hypothetical protein XP_002342097 [Homo ... 30 0.32
gi|33188461 GATA binding protein 4 [Homo sapiens] 30 0.42
gi|19111150 angiomotin isoform 2 [Homo sapiens] 30 0.55
gi|166064029 angiomotin isoform 1 [Homo sapiens] 30 0.55
gi|126352608 elastin isoform e precursor [Homo sapiens] 29 0.72
gi|126352446 elastin isoform d precursor [Homo sapiens] 29 0.72
gi|126352322 elastin isoform c precursor [Homo sapiens] 29 0.72
gi|126352700 elastin isoform b precursor [Homo sapiens] 29 0.72
gi|126352440 elastin isoform a precursor [Homo sapiens] 29 0.72
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 29 0.72
>gi|55925614 interferon, alpha-inducible protein 27 isoform 2 [Homo
sapiens]
Length = 119
Score = 213 bits (541), Expect = 4e-56
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS 60
MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS
Sbjct: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS 60
Query: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIARFY 119
SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIARFY
Sbjct: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIARFY 119
>gi|194272171 interferon, alpha-inducible protein 27 isoform 1 [Homo
sapiens]
Length = 122
Score = 207 bits (527), Expect = 1e-54
Identities = 119/122 (97%), Positives = 119/122 (97%), Gaps = 3/122 (2%)
Query: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVA---VPMVLSAMGFTAAG 57
MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVA VPMVLSAMGFTAAG
Sbjct: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAMAAVPMVLSAMGFTAAG 60
Query: 58 IASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR 117
IASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR
Sbjct: 61 IASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR 120
Query: 118 FY 119
FY
Sbjct: 121 FY 122
>gi|14042964 TLH29 protein precursor [Homo sapiens]
Length = 130
Score = 106 bits (265), Expect = 4e-24
Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
Query: 30 LARIATVVIGGVVAV---PMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVA 86
+ R A +GG +AV P+VLSAMGFT AGIA+SSIAAKMMSAAAIANGGGV++GSLVA
Sbjct: 2 MKRAAAAAVGGALAVGAVPVVLSAMGFTGAGIAASSIAAKMMSAAAIANGGGVSAGSLVA 61
Query: 87 TLQSLGATGLSGLTKFILGSIGSAIAAVI 115
TLQS+GA GLS + +L S+GS + A +
Sbjct: 62 TLQSVGAAGLSTSSNILLASVGSVLGACL 90
>gi|46048520 interferon, alpha-inducible protein 27-like 1 [Homo
sapiens]
Length = 104
Score = 97.1 bits (240), Expect = 3e-21
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
Query: 37 VIGGVVAVPMVL---SAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGA 93
V+GGVVAV VL SAMGFT+ GIA+SSIAAKMMS AAIANGGGVA+GSLVA LQS+GA
Sbjct: 17 VVGGVVAVGTVLVALSAMGFTSVGIAASSIAAKMMSTAAIANGGGVAAGSLVAILQSVGA 76
Query: 94 TGLSGLTKFILGSIGSAIAA 113
GLS +K I G G+A+ A
Sbjct: 77 AGLSVTSKVIGGFAGTALGA 96
>gi|21699070 interferon, alpha-inducible protein 27-like 1 [Homo
sapiens]
Length = 104
Score = 97.1 bits (240), Expect = 3e-21
Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
Query: 37 VIGGVVAVPMVL---SAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGA 93
V+GGVVAV VL SAMGFT+ GIA+SSIAAKMMS AAIANGGGVA+GSLVA LQS+GA
Sbjct: 17 VVGGVVAVGTVLVALSAMGFTSVGIAASSIAAKMMSTAAIANGGGVAAGSLVAILQSVGA 76
Query: 94 TGLSGLTKFILGSIGSAIAA 113
GLS +K I G G+A+ A
Sbjct: 77 AGLSVTSKVIGGFAGTALGA 96
>gi|13259550 interferon, alpha-inducible protein 6 isoform c [Homo
sapiens]
Length = 138
Score = 71.6 bits (174), Expect = 1e-13
Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
Query: 36 VVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATG 95
+ +GG +AV L A+GFT AGIA++S+AA +MS +AI NGGGV +G LVATLQSLGA G
Sbjct: 53 MAVGGGLAVAG-LPALGFTGAGIAANSVAASLMSWSAILNGGGVPAGGLVATLQSLGAGG 111
Query: 96 LSGLTKFILGSIGS 109
S ++G+IG+
Sbjct: 112 SS----VVIGNIGA 121
>gi|13259548 interferon, alpha-inducible protein 6 isoform b [Homo
sapiens]
Length = 134
Score = 71.6 bits (174), Expect = 1e-13
Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
Query: 36 VVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATG 95
+ +GG +AV L A+GFT AGIA++S+AA +MS +AI NGGGV +G LVATLQSLGA G
Sbjct: 49 MAVGGGLAVAG-LPALGFTGAGIAANSVAASLMSWSAILNGGGVPAGGLVATLQSLGAGG 107
Query: 96 LSGLTKFILGSIGS 109
S ++G+IG+
Sbjct: 108 SS----VVIGNIGA 117
>gi|13259552 interferon, alpha-inducible protein 6 isoform a [Homo
sapiens]
Length = 130
Score = 71.6 bits (174), Expect = 1e-13
Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
Query: 36 VVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATG 95
+ +GG +AV L A+GFT AGIA++S+AA +MS +AI NGGGV +G LVATLQSLGA G
Sbjct: 45 MAVGGGLAVAG-LPALGFTGAGIAANSVAASLMSWSAILNGGGVPAGGLVATLQSLGAGG 103
Query: 96 LSGLTKFILGSIGS 109
S ++G+IG+
Sbjct: 104 SS----VVIGNIGA 113
>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
sapiens]
Length = 391
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 6 LTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMG--FTAAGIASSSI 63
LTS V + + V+ + AV+ L + T ++ + + +V++A+G T+ G+ +S+
Sbjct: 59 LTSLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVTSL 118
Query: 64 AAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSI 107
+ A+ GV SLV + SL ++ LT I SI
Sbjct: 119 VMVITPLVAVITPLGVVITSLVVVITSL-VMVITSLTVVITSSI 161
>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
sapiens]
Length = 398
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 6 LTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMG--FTAAGIASSSI 63
LTS V + + V+ + AV+ L + T ++ + + +V++A+G T+ G+ +S+
Sbjct: 66 LTSLVVVTTSLVMVITPPFAVITSLGVVITSLVVIITCLVLVITALGVVITSLGVVVTSL 125
Query: 64 AAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSI 107
+ A+ GV SLV + SL ++ LT I SI
Sbjct: 126 VMVITPLVAVITPLGVVITSLVVVITSL-VMVITSLTVVITSSI 168
>gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo
sapiens]
Length = 1032
Score = 33.5 bits (75), Expect = 0.038
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 4 SALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSI 63
S+L + V S+ K + G A+V + +V G A+ +S G +I
Sbjct: 463 SSLGKAIVCSLGKAIVSGPGKAIVSGPGK--AIVSGPGKAI---VSGPGKAIISSLGKAI 517
Query: 64 AAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAA 113
+ A G + SG A + SLG +S L K I+ S+G AI +
Sbjct: 518 VCSLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSSLGKAIVSSLGKAIVS 567
Score = 31.2 bits (69), Expect = 0.19
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 4 SALTSSAVTSVAKVVRVASGSAVVL-PLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
S+L + V+ K + + G A+V P I + +V+ P G A ++S
Sbjct: 719 SSLGKAIVSGPGKAIVSSPGKAIVSGPGKAIVSSPGKAIVSSPGKAIVSGPGKAIVSSPG 778
Query: 63 IAAKMMSAAAIANGGG--VASGSLVATLQSLGATGLSGLTKFILGSIGSAIAA 113
A AI +G G + S A + SLG +S L K I+ S+G AI +
Sbjct: 779 KAIVSSPGKAIVSGLGKAIVSSPGKAIVSSLGKAIVSSLGKAIVSSLGKAIVS 831
Score = 28.5 bits (62), Expect = 1.2
Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 19/133 (14%)
Query: 4 SALTSSAVTSVAKVVRVASGSAVVLPLARIAT-------------VVIGG----VVAVP- 45
S+L + V S+ K + G A+V L + ++ G +V+ P
Sbjct: 391 SSLGKAIVCSLGKAIVSGPGKAIVSGLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPG 450
Query: 46 -MVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFIL 104
++S G +I + A G + SG A + G +SG K I+
Sbjct: 451 KAIVSGPGKAIVSSLGKAIVCSLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAII 510
Query: 105 GSIGSAIAAVIAR 117
S+G AI + +
Sbjct: 511 SSLGKAIVCSLGK 523
Score = 28.1 bits (61), Expect = 1.6
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 11 VTSVAKVVRVASGSAVVL-PLARIATVVIGGVVAVP--MVLSAMGFTAAGIASSSIAAKM 67
V+S K + + G A+V P I + +V+ P ++S++G +I +
Sbjct: 638 VSSPGKAIVSSPGKAIVSSPGKAIVSSPGKAIVSSPGKAIVSSLGKAIVSGPGKAIVSGP 697
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAA 113
A G + S A + SLG +SG K I+ S G AI +
Sbjct: 698 GKAIVSGPGKAIVSSPGKAIVSSLGKAIVSGPGKAIVSSPGKAIVS 743
Score = 26.9 bits (58), Expect = 3.6
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Query: 11 VTSVAKVVRVASGSAVVL-PLARIATVVIGGVVAVP--MVLSAMGFTAAGIASSSIAAKM 67
V+ K + G A+V P I + +V+ P ++S +G +I + +
Sbjct: 142 VSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGLGKAIVSGPGKAIVSGL 201
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR 117
A + G + SG A + G +SG K I+ S+G AI + +
Sbjct: 202 GKAIVSSLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSSLGKAIVCSLGK 251
Score = 26.9 bits (58), Expect = 3.6
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Query: 11 VTSVAKVVRVASGSAVVL-PLARIATVVIGGVVAVP--MVLSAMGFTAAGIASSSIAAKM 67
V+ K + G A+V P I + +V+ P ++S +G +I + +
Sbjct: 294 VSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGLGKAIVSGPGKAIVSGL 353
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR 117
A + G + SG A + G +SG K I+ S+G AI + +
Sbjct: 354 GKAIVSSLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSSLGKAIVCSLGK 403
Score = 26.9 bits (58), Expect = 3.6
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIG-GVVAVP--MVLSAMGFTAAGIASSSIAAKM 67
V+ K + G A+V L + +G +V+ P ++S G +I +
Sbjct: 446 VSGPGKAIVSGPGKAIVSSLGKAIVCSLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGP 505
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIAR 117
A + G + A + G +SGL K I+ S+G AI + + +
Sbjct: 506 GKAIISSLGKAIVCSLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSSLGK 555
Score = 25.8 bits (55), Expect = 7.9
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPM---VLSAMGFTAAGIASSSIAAKM 67
V+ K + G A+V L + G + + ++S++G +I +
Sbjct: 166 VSGPGKAIVSGPGKAIVSGLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSGPGKAIVSGP 225
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAA 113
A G + S A + SLG +SG K I+ +G AI +
Sbjct: 226 GKAIVSGPGKAIVSSLGKAIVCSLGKAIVSGPGKAIVSGLGKAIVS 271
Score = 25.8 bits (55), Expect = 7.9
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPM---VLSAMGFTAAGIASSSIAAKM 67
V+ K + G A+V L + G + + ++S++G +I +
Sbjct: 318 VSGPGKAIVSGPGKAIVSGLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSGPGKAIVSGP 377
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAA 113
A G + S A + SLG +SG K I+ +G AI +
Sbjct: 378 GKAIVSGPGKAIVSSLGKAIVCSLGKAIVSGPGKAIVSGLGKAIVS 423
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 33.1 bits (74), Expect = 0.050
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 34/139 (24%)
Query: 7 TSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIA------- 59
T S + A+V+ A+ +A +L A +A GV A P VLS GFT +
Sbjct: 268 TGSPYANTAEVLPTAAAAAGLLGHANLA-----GVAAFPAVLS--GFTGNDLVAITSALN 320
Query: 60 ----------------SSSIAAKMMSAAAIANGGGVASGSLVATLQS----LGATGLSGL 99
S + A ++AAA + A+ +L+AT S G+T
Sbjct: 321 TLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTA 380
Query: 100 TKFILGSIGSAIAAVIARF 118
F LGS+ +A AA F
Sbjct: 381 GTFALGSLAAATAATNGYF 399
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 33.1 bits (74), Expect = 0.050
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 34/139 (24%)
Query: 7 TSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIA------- 59
T S + A+V+ A+ +A +L A +A GV A P VLS GFT +
Sbjct: 244 TGSPYANTAEVLPTAAAAAGLLGHANLA-----GVAAFPAVLS--GFTGNDLVAITSALN 296
Query: 60 ----------------SSSIAAKMMSAAAIANGGGVASGSLVATLQS----LGATGLSGL 99
S + A ++AAA + A+ +L+AT S G+T
Sbjct: 297 TLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTA 356
Query: 100 TKFILGSIGSAIAAVIARF 118
F LGS+ +A AA F
Sbjct: 357 GTFALGSLAAATAATNGYF 375
>gi|14149631 ring finger protein 112 [Homo sapiens]
Length = 632
Score = 32.7 bits (73), Expect = 0.065
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 50 AMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGS 109
A+G G+A + A M +AA A G VA+G+ V GATG + + G +G+
Sbjct: 554 AVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAV------GATGAA----VVGGGVGA 603
Query: 110 AIAAVI 115
+AA +
Sbjct: 604 GLAATV 609
Score = 28.9 bits (63), Expect = 0.94
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 21 ASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVA 80
A G AV L +A V+G +A + + G AAG A + A ++ GGGV
Sbjct: 550 AVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVV-------GGGVG 602
Query: 81 SGSLVATL 88
+G L AT+
Sbjct: 603 AG-LAATV 609
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 7 TSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAK 66
T+ VTS + G+A LP R P+ S++G T ++ ++
Sbjct: 2637 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTA 2696
Query: 67 MMSAAAIANGGGVASGS--LVATLQSLGATG 95
MS A ++ A S L AT + GATG
Sbjct: 2697 TMSTATPSSTPETAHTSTVLTATATTTGATG 2727
Score = 26.9 bits (58), Expect = 3.6
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 3 ASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
++ T+ VTS + G+A LP R + S++G T ++ ++
Sbjct: 4955 STTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTT 5014
Query: 63 IAAKMMSAAAIANGGGVASGS--LVATLQSLGATG 95
MS A ++ S L AT + GATG
Sbjct: 5015 TPTATMSTATPSSTPETVHTSTVLTATATTTGATG 5049
>gi|98986457 host cell factor 1 [Homo sapiens]
Length = 2035
Score = 32.0 bits (71), Expect = 0.11
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 4 SALTSSAVTSVAKVVRV-ASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
++++S+ TS ++ V SG+ V A++ T V+GGV ++ + G A S
Sbjct: 619 TSVSSATNTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALIS 678
Query: 63 IAAKMMSAA------AIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIG 108
K+MS A G ++G + +Q+ G + K + + G
Sbjct: 679 NLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADG 730
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 7 TSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAK 66
T+ VTS + G+A LP R P+ S++G T ++ ++
Sbjct: 1947 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTA 2006
Query: 67 MMSAAAIANGGGVASGS--LVATLQSLGATG 95
MS A ++ A S L AT + GATG
Sbjct: 2007 TMSTATPSSTPETAHTSTVLTATATTTGATG 2037
Score = 26.9 bits (58), Expect = 3.6
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 3 ASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
++ T+ VTS + G+A LP R + S++G T ++ ++
Sbjct: 4485 STTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTT 4544
Query: 63 IAAKMMSAAAIANGGGVASGS--LVATLQSLGATG 95
MS A ++ S L AT + GATG
Sbjct: 4545 TPTATMSTATPSSTPETVHTSTVLTATATTTGATG 4579
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 30.8 bits (68), Expect = 0.25
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 6 LTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAA 65
+ SA +KVV V GSA+ + + A + GG + +V A + + +
Sbjct: 639 IAQSAKVQPSKVVGVPVGSALPSTVKQ-AVAISGGQI---LVAKASSSVSKAVGPKQVVT 694
Query: 66 KMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAV 114
+ ++ A ++ GGG V TL T +G K GS GS +A +
Sbjct: 695 QGVAKAIVSGGGGTIVAQPVQTLTKAQVTA-AGPQK--SGSQGSVMATL 740
>gi|239752780 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 0.32
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIGGVVAV---PMVLSAMGFTAAGIASSSIAAKM 67
V + VV V G+A VL +A +ATV G VA P++++A+ A + + +A +
Sbjct: 162 VVLITAVVAVKGGAAGVLGVA-VATV--AGTVATVGSPVLVAAV---VAMVVETVVALWL 215
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAI 111
S+ G+ +GS V + + G+ F++GS +
Sbjct: 216 GSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTGWMFVVGSTAGVV 259
Score = 28.1 bits (61), Expect = 1.6
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Query: 23 GSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASG 82
G V+P R+ + G V + A+G A + S + A + AA+ G G +
Sbjct: 83 GPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGV 142
Query: 83 SLVATLQSLGATGLSGLTKFIL------------GSIGSAIAAV 114
A + G S T +L G +G A+A V
Sbjct: 143 VARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
Score = 27.7 bits (60), Expect = 2.1
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS 60
M S + + ++ + V V + V +++ A VV GG A +V A+ +G
Sbjct: 98 MSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVV-GGEGASGVVARAVATVVSGRGR 156
Query: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIA 116
S ++ A +A GG A VA G G + + + V+A
Sbjct: 157 SLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVA 212
>gi|239747286 PREDICTED: hypothetical protein XP_002346424 [Homo
sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 0.32
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIGGVVAV---PMVLSAMGFTAAGIASSSIAAKM 67
V + VV V G+A VL +A +ATV G VA P++++A+ A + + +A +
Sbjct: 162 VVLITAVVAVKGGAAGVLGVA-VATV--AGTVATVGSPVLVAAV---VAMVVETVVALWL 215
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAI 111
S+ G+ +GS V + + G+ F++GS +
Sbjct: 216 GSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTGWMFVVGSTAGVV 259
Score = 28.1 bits (61), Expect = 1.6
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Query: 23 GSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASG 82
G V+P R+ + G V + A+G A + S + A + AA+ G G +
Sbjct: 83 GPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGV 142
Query: 83 SLVATLQSLGATGLSGLTKFIL------------GSIGSAIAAV 114
A + G S T +L G +G A+A V
Sbjct: 143 VARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
Score = 27.7 bits (60), Expect = 2.1
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS 60
M S + + ++ + V V + V +++ A VV GG A +V A+ +G
Sbjct: 98 MSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVV-GGEGASGVVARAVATVVSGRGR 156
Query: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIA 116
S ++ A +A GG A VA G G + + + V+A
Sbjct: 157 SLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVA 212
>gi|239741110 PREDICTED: hypothetical protein XP_002342097 [Homo
sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 0.32
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 11 VTSVAKVVRVASGSAVVLPLARIATVVIGGVVAV---PMVLSAMGFTAAGIASSSIAAKM 67
V + VV V G+A VL +A +ATV G VA P++++A+ A + + +A +
Sbjct: 162 VVLITAVVAVKGGAAGVLGVA-VATV--AGTVATVGSPVLVAAV---VAMVVETVVALWL 215
Query: 68 MSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAI 111
S+ G+ +GS V + + G+ F++GS +
Sbjct: 216 GSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTGWMFVVGSTAGVV 259
Score = 28.1 bits (61), Expect = 1.6
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 12/104 (11%)
Query: 23 GSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASG 82
G V+P R+ + G V + A+G A + S + A + AA+ G G +
Sbjct: 83 GPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGV 142
Query: 83 SLVATLQSLGATGLSGLTKFIL------------GSIGSAIAAV 114
A + G S T +L G +G A+A V
Sbjct: 143 VARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
Score = 27.7 bits (60), Expect = 2.1
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 1 MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIAS 60
M S + + ++ + V V + V +++ A VV GG A +V A+ +G
Sbjct: 98 MSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVV-GGEGASGVVARAVATVVSGRGR 156
Query: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGLSGLTKFILGSIGSAIAAVIA 116
S ++ A +A GG A VA G G + + + V+A
Sbjct: 157 SLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVA 212
>gi|33188461 GATA binding protein 4 [Homo sapiens]
Length = 442
Score = 30.0 bits (66), Expect = 0.42
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 39 GGVVAVPMVLSAMGF--TAAGIASSSIAAKMMSAAAIANGGGVASGSLVATLQSLGATGL 96
G P V F T +A+++ AA AAA ++GGG A+G+ +A + G G
Sbjct: 96 GAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGG-AAGAGLAGREQYGRAGF 154
Query: 97 SG 98
+G
Sbjct: 155 AG 156
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 SSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIA-SSSIAAK 66
++AV ++ VA+ + A AT+ V A P+ ++A AA A S + AA
Sbjct: 466 TAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAA 525
Query: 67 MMSAAAIANGGGVASGSLVAT 87
+A + A G + + + VA+
Sbjct: 526 TAAAVSPAAAGQIPAAASVAS 546
Score = 28.9 bits (63), Expect = 0.94
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 3 ASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
A+A T++A+T+ A + +A P+A +A A P +A TAA ++ ++
Sbjct: 479 AAAATAAAITATAATITTTMVAAA--PVA-VAAAAAPAAAAAPSPATAAA-TAAAVSPAA 534
Query: 63 I-----AAKMMSAAAIANGGGVASGSLVA 86
AA + SAAA+A A+ VA
Sbjct: 535 AGQIPAAASVASAAAVAPSAAAAAAVQVA 563
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 29.6 bits (65), Expect = 0.55
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 8 SSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIA-SSSIAAK 66
++AV ++ VA+ + A AT+ V A P+ ++A AA A S + AA
Sbjct: 875 TAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAA 934
Query: 67 MMSAAAIANGGGVASGSLVAT 87
+A + A G + + + VA+
Sbjct: 935 TAAAVSPAAAGQIPAAASVAS 955
Score = 28.9 bits (63), Expect = 0.94
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 3 ASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSS 62
A+A T++A+T+ A + +A P+A +A A P +A TAA ++ ++
Sbjct: 888 AAAATAAAITATAATITTTMVAAA--PVA-VAAAAAPAAAAAPSPATAAA-TAAAVSPAA 943
Query: 63 I-----AAKMMSAAAIANGGGVASGSLVA 86
AA + SAAA+A A+ VA
Sbjct: 944 AGQIPAAASVASAAAVAPSAAAAAAVQVA 972
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 29.3 bits (64), Expect = 0.72
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 37 VIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVAT-LQSLGATG 95
V+GG+ A+ V G AG A+++ AAK +AA A G V + L + LG G
Sbjct: 583 VLGGLGALGGVGIPGGVVGAGPAAAAAAAK--AAAKAAQFGLVGAAGLGGLGVGGLGVPG 640
Query: 96 LSGLTKFILGSIGSAIAAVIARF 118
+ G LG I A AA A++
Sbjct: 641 VGG-----LGGIPPAAAAKAAKY 658
Score = 26.9 bits (58), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 14 VAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAI 73
VA V VA G + + V + V V + G AA +++ +AAK AA
Sbjct: 466 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 525
Query: 74 ANGGGVASGSLVATLQSLG-ATGLSGLTKFI----LGSIGSAIAAVIARFY 119
G G+ + + LG G+ GL G++ A+AA A Y
Sbjct: 526 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 576
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 29.3 bits (64), Expect = 0.72
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 37 VIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVAT-LQSLGATG 95
V+GG+ A+ V G AG A+++ AAK +AA A G V + L + LG G
Sbjct: 607 VLGGLGALGGVGIPGGVVGAGPAAAAAAAK--AAAKAAQFGLVGAAGLGGLGVGGLGVPG 664
Query: 96 LSGLTKFILGSIGSAIAAVIARF 118
+ G LG I A AA A++
Sbjct: 665 VGG-----LGGIPPAAAAKAAKY 682
Score = 26.9 bits (58), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 14 VAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAI 73
VA V VA G + + V + V V + G AA +++ +AAK AA
Sbjct: 490 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 549
Query: 74 ANGGGVASGSLVATLQSLG-ATGLSGLTKFI----LGSIGSAIAAVIARFY 119
G G+ + + LG G+ GL G++ A+AA A Y
Sbjct: 550 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 600
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 29.3 bits (64), Expect = 0.72
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 37 VIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVAT-LQSLGATG 95
V+GG+ A+ V G AG A+++ AAK +AA A G V + L + LG G
Sbjct: 588 VLGGLGALGGVGIPGGVVGAGPAAAAAAAK--AAAKAAQFGLVGAAGLGGLGVGGLGVPG 645
Query: 96 LSGLTKFILGSIGSAIAAVIARF 118
+ G LG I A AA A++
Sbjct: 646 VGG-----LGGIPPAAAAKAAKY 663
Score = 26.9 bits (58), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 14 VAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAI 73
VA V VA G + + V + V V + G AA +++ +AAK AA
Sbjct: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 530
Query: 74 ANGGGVASGSLVATLQSLG-ATGLSGLTKFI----LGSIGSAIAAVIARFY 119
G G+ + + LG G+ GL G++ A+AA A Y
Sbjct: 531 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 581
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 29.3 bits (64), Expect = 0.72
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 37 VIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVAT-LQSLGATG 95
V+GG+ A+ V G AG A+++ AAK +AA A G V + L + LG G
Sbjct: 573 VLGGLGALGGVGIPGGVVGAGPAAAAAAAK--AAAKAAQFGLVGAAGLGGLGVGGLGVPG 630
Query: 96 LSGLTKFILGSIGSAIAAVIARF 118
+ G LG I A AA A++
Sbjct: 631 VGG-----LGGIPPAAAAKAAKY 648
Score = 26.9 bits (58), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 14 VAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAI 73
VA V VA G + + V + V V + G AA +++ +AAK AA
Sbjct: 456 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515
Query: 74 ANGGGVASGSLVATLQSLG-ATGLSGLTKFI----LGSIGSAIAAVIARFY 119
G G+ + + LG G+ GL G++ A+AA A Y
Sbjct: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 566
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 29.3 bits (64), Expect = 0.72
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 37 VIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAIANGGGVASGSLVAT-LQSLGATG 95
V+GG+ A+ V G AG A+++ AAK +AA A G V + L + LG G
Sbjct: 602 VLGGLGALGGVGIPGGVVGAGPAAAAAAAK--AAAKAAQFGLVGAAGLGGLGVGGLGVPG 659
Query: 96 LSGLTKFILGSIGSAIAAVIARF 118
+ G LG I A AA A++
Sbjct: 660 VGG-----LGGIPPAAAAKAAKY 677
Score = 26.9 bits (58), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 14 VAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAAGIASSSIAAKMMSAAAI 73
VA V VA G + + V + V V + G AA +++ +AAK AA
Sbjct: 485 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 544
Query: 74 ANGGGVASGSLVATLQSLG-ATGLSGLTKFI----LGSIGSAIAAVIARFY 119
G G+ + + LG G+ GL G++ A+AA A Y
Sbjct: 545 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKY 595
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 29.3 bits (64), Expect = 0.72
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 SALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGGVVAVPMVLSAMGFTAA---GIAS 60
++ +++A+TS + + + ++ ++ A+V I ++P++ SA+ T+A A+
Sbjct: 1821 ASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAA 1880
Query: 61 SSIAAKMMSAAAIANGGGVASGSLVATLQSLGA 93
SS AA +++A I AS L S A
Sbjct: 1881 SSPAAPVITAPTIPASAPTASVPLAPASASAPA 1913
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.127 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,513,321
Number of Sequences: 37866
Number of extensions: 73558
Number of successful extensions: 580
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 469
Number of HSP's gapped (non-prelim): 115
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.