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Search of human proteins with 55769572
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55769572 zinc finger protein 29 isoform 3 [Homo sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55769572 zinc finger protein 29 isoform 3 [Homo sapiens] 298 1e-81
gi|227452255 zinc finger protein 29 isoform 2 [Homo sapiens] 274 2e-74
gi|63176661 zinc finger protein 29 isoform 1 [Homo sapiens] 273 3e-74
gi|55769564 zinc finger protein 36 [Homo sapiens] 97 4e-21
gi|41281749 zinc finger protein 323 [Homo sapiens] 94 3e-20
gi|206725432 zinc finger protein 323 [Homo sapiens] 94 3e-20
gi|206725430 zinc finger protein 323 [Homo sapiens] 94 3e-20
gi|206725428 zinc finger protein 323 [Homo sapiens] 94 3e-20
gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens] 92 1e-19
gi|46195755 SCAN domain containing 3 [Homo sapiens] 91 3e-19
gi|190610012 zinc finger protein 24 [Homo sapiens] 87 4e-18
gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens] 87 5e-18
gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens] 87 5e-18
gi|56699475 zinc finger protein 202 [Homo sapiens] 87 7e-18
gi|197383784 zinc finger protein 213 [Homo sapiens] 86 9e-18
gi|32698678 zinc finger protein 213 [Homo sapiens] 86 9e-18
gi|55741870 zinc finger protein 483 isoform b [Homo sapiens] 86 9e-18
gi|190014620 zinc finger protein 483 isoform a [Homo sapiens] 86 9e-18
gi|64368880 zinc finger and SCAN domain containing 25 [Homo sapi... 86 9e-18
gi|254281232 zinc finger and SCAN domain containing 12 [Homo sap... 86 1e-17
gi|27544931 zinc finger protein 38 [Homo sapiens] 85 2e-17
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 84 4e-17
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 84 4e-17
gi|47716687 zinc finger protein 167 isoform 1 [Homo sapiens] 84 6e-17
gi|47716685 zinc finger protein 167 isoform 2 [Homo sapiens] 84 6e-17
gi|5454180 zinc finger protein 193 [Homo sapiens] 84 6e-17
gi|190883486 zinc finger protein 390 [Homo sapiens] 83 7e-17
gi|194328783 zinc finger protein 287 [Homo sapiens] 82 2e-16
gi|31982909 zinc finger protein 394 [Homo sapiens] 82 2e-16
gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens] 81 3e-16
>gi|55769572 zinc finger protein 29 isoform 3 [Homo sapiens]
Length = 146
Score = 298 bits (762), Expect = 1e-81
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA
Sbjct: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
Query: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE
Sbjct: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
Query: 121 AAALVEDLTQTLQDSETASCVHGCPV 146
AAALVEDLTQTLQDSETASCVHGCPV
Sbjct: 121 AAALVEDLTQTLQDSETASCVHGCPV 146
>gi|227452255 zinc finger protein 29 isoform 2 [Homo sapiens]
Length = 150
Score = 274 bits (700), Expect = 2e-74
Identities = 136/138 (98%), Positives = 136/138 (98%)
Query: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA
Sbjct: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
Query: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE
Sbjct: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
Query: 121 AAALVEDLTQTLQDSETA 138
AAALVEDLTQTLQDS A
Sbjct: 121 AAALVEDLTQTLQDSAVA 138
>gi|63176661 zinc finger protein 29 isoform 1 [Homo sapiens]
Length = 614
Score = 273 bits (699), Expect = 3e-74
Identities = 135/136 (99%), Positives = 136/136 (100%)
Query: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA
Sbjct: 1 MMAADIPRVTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSA 60
Query: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE
Sbjct: 61 GKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRPESSEE 120
Query: 121 AAALVEDLTQTLQDSE 136
AAALVEDLTQTLQDS+
Sbjct: 121 AAALVEDLTQTLQDSD 136
>gi|55769564 zinc finger protein 36 [Homo sapiens]
Length = 563
Score = 97.4 bits (241), Expect = 4e-21
Identities = 68/158 (43%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 1 MMAADIPRVTTPLSSLVQVPQEED-----RQEEEVTTMILEDDSWVQEAVLQEDGP-ESE 54
MM A+ R T LS Q QE+D + EEE ED W Q++ LQ+ P + E
Sbjct: 1 MMTAE-SREATGLSP--QAAQEKDGIVIVKVEEEDE----EDHMWGQDSTLQDTPPPDPE 53
Query: 55 PFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKE 105
F Q + Q T GP+ AL RL+ELC +WLRPE++TKEQ+L ++LPKE
Sbjct: 54 IFRQRFRRFCYQN--TFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKE 111
Query: 106 IQAWLQEHRPESSEEAAALVEDLTQTLQDSETASCVHG 143
+Q WLQE+RP+S EEA L+EDL L + VHG
Sbjct: 112 LQVWLQEYRPDSGEEAVTLLEDLELDLSGQQVPGQVHG 149
>gi|41281749 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 36 EDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTK 95
ED W QE L+ + + + + +E T GP+ AL RLRELC +WLRPE+HTK
Sbjct: 17 EDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE-TPGPREALSRLRELCHQWLRPEIHTK 75
Query: 96 EQML---------TMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
EQ+L T+LP+E+QAW++EH PES EEA A+VEDL Q L +
Sbjct: 76 EQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQELSE 123
>gi|206725432 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 36 EDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTK 95
ED W QE L+ + + + + +E T GP+ AL RLRELC +WLRPE+HTK
Sbjct: 17 EDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE-TPGPREALSRLRELCHQWLRPEIHTK 75
Query: 96 EQML---------TMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
EQ+L T+LP+E+QAW++EH PES EEA A+VEDL Q L +
Sbjct: 76 EQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQELSE 123
>gi|206725430 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 36 EDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTK 95
ED W QE L+ + + + + +E T GP+ AL RLRELC +WLRPE+HTK
Sbjct: 17 EDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE-TPGPREALSRLRELCHQWLRPEIHTK 75
Query: 96 EQML---------TMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
EQ+L T+LP+E+QAW++EH PES EEA A+VEDL Q L +
Sbjct: 76 EQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQELSE 123
>gi|206725428 zinc finger protein 323 [Homo sapiens]
Length = 406
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/108 (47%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 36 EDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTK 95
ED W QE L+ + + + + +E T GP+ AL RLRELC +WLRPE+HTK
Sbjct: 17 EDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE-TPGPREALSRLRELCHQWLRPEIHTK 75
Query: 96 EQML---------TMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
EQ+L T+LP+E+QAW++EH PES EEA A+VEDL Q L +
Sbjct: 76 EQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQELSE 123
>gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens]
Length = 494
Score = 92.4 bits (228), Expect = 1e-19
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 26 QEEEVTTMILEDDSWV--QEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGRLREL 83
++E + + +E++++V Q+ LQE+ E F Q + + GP+ AL RLREL
Sbjct: 15 EQEGLLVVKVEEENYVLDQDFGLQENPWSQEVFRQKFRQFSYSDST--GPREALSRLREL 72
Query: 84 CRRWLRPEVHTKEQMLTML---------PKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
C +WLRPEVH+KEQ+L +L P+E+QAWL+EHRPE+ EEA ++E+L + L++
Sbjct: 73 CCQWLRPEVHSKEQILELLMLEQFLAILPEELQAWLREHRPENGEEAVTMLEELEKELEE 132
Query: 135 SETASCVHG 143
HG
Sbjct: 133 PRQQDTTHG 141
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 90.9 bits (224), Expect = 3e-19
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 21 QEEDRQEEEVTTMILEDD-SWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGR 79
Q + Q E + + E+D +W QE+ L+ + + + + +E T GP+ AL +
Sbjct: 14 QAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCYQE-TPGPREALSQ 72
Query: 80 LRELCRRWLRPEVHTKEQM---------LTMLPKEIQAWLQEHRPESSEEAAALVEDLTQ 130
LRELCR+WL PE+HTKEQ+ LT+LP+E+Q+W++EH PES EE L+EDL +
Sbjct: 73 LRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESGEEVVTLLEDLER 132
Query: 131 TLQD 134
L +
Sbjct: 133 ELDE 136
>gi|190610012 zinc finger protein 24 [Homo sapiens]
Length = 368
Score = 87.4 bits (215), Expect = 4e-18
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 15/131 (11%)
Query: 15 SLVQVPQEEDRQEEEVTTMILEDDSWVQE--AVLQEDGPESEPFPQSAGKGGPQEEVTRG 72
S++ +P ++ EE++ + LE+D +E ++ P+ E F Q + G Q+ + G
Sbjct: 10 SILIIPTPDE--EEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGYQD--SPG 65
Query: 73 PQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAAA 123
P+ A+ +LRELCR WLRPE HTKEQ+L +LPKE+Q W+++H PE+ EEA
Sbjct: 66 PREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVT 125
Query: 124 LVEDLTQTLQD 134
++EDL L D
Sbjct: 126 VLEDLESELDD 136
>gi|206597472 zinc finger protein 397 isoform 1 [Homo sapiens]
Length = 534
Score = 87.0 bits (214), Expect = 5e-18
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 14 SSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPES--EPFPQSAGKGGPQEEVTR 71
S ++ +D E+E+ + +ED+ E Q +S E F Q K QE T
Sbjct: 5 SGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE--TP 62
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAA 122
GP+ AL RL+ELC +WL PE+HTKEQ+L ++LP+E+Q W+Q+H PES EEA
Sbjct: 63 GPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEEAV 122
Query: 123 ALVEDLTQTLQD 134
L+EDL + D
Sbjct: 123 TLLEDLEREFDD 134
>gi|14150143 zinc finger protein 397 isoform 2 [Homo sapiens]
Length = 275
Score = 87.0 bits (214), Expect = 5e-18
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 14 SSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPES--EPFPQSAGKGGPQEEVTR 71
S ++ +D E+E+ + +ED+ E Q +S E F Q K QE T
Sbjct: 5 SGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE--TP 62
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAA 122
GP+ AL RL+ELC +WL PE+HTKEQ+L ++LP+E+Q W+Q+H PES EEA
Sbjct: 63 GPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEEAV 122
Query: 123 ALVEDLTQTLQD 134
L+EDL + D
Sbjct: 123 TLLEDLEREFDD 134
>gi|56699475 zinc finger protein 202 [Homo sapiens]
Length = 648
Score = 86.7 bits (213), Expect = 7e-18
Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 20 PQEEDRQEEEVTTMI-LEDDSWVQ-EAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGAL 77
P+++D EEE M+ LEDD + E+VLQ D P E Q+ + QE + P+ AL
Sbjct: 7 PEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAAS--PREAL 64
Query: 78 GRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAAALVEDL 128
RLRELC +WLRPE TKEQ+L T+LP E+Q+W++ RPES EEA LVE L
Sbjct: 65 IRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTLVEGL 124
>gi|197383784 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 86.3 bits (212), Expect = 9e-18
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 9 VTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEE 68
+ PL + Q P E E + + +ED SW QE+ EDG +SE Q + +
Sbjct: 1 MAAPLEAQDQAPGEG----EGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGD- 55
Query: 69 VTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSE 119
GP A +L ELC RWLRPE+ TKEQ+L T+LP EIQ W++E P S E
Sbjct: 56 -VHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGE 114
Query: 120 EAAALVEDL 128
EA ALVEDL
Sbjct: 115 EAVALVEDL 123
>gi|32698678 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 86.3 bits (212), Expect = 9e-18
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 15/129 (11%)
Query: 9 VTTPLSSLVQVPQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEE 68
+ PL + Q P E E + + +ED SW QE+ EDG +SE Q + +
Sbjct: 1 MAAPLEAQDQAPGEG----EGLLIVKVEDSSWEQESAQHEDGRDSEACRQRFRQFCYGD- 55
Query: 69 VTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSE 119
GP A +L ELC RWLRPE+ TKEQ+L T+LP EIQ W++E P S E
Sbjct: 56 -VHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQGWVREQHPGSGE 114
Query: 120 EAAALVEDL 128
EA ALVEDL
Sbjct: 115 EAVALVEDL 123
>gi|55741870 zinc finger protein 483 isoform b [Homo sapiens]
Length = 256
Score = 86.3 bits (212), Expect = 9e-18
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 18/145 (12%)
Query: 8 RVTTPLSSLVQVPQEEDR----QEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKG 63
+ PL+ + + E ++ EV ++ + QEA+L+ + ++E F Q +
Sbjct: 2 QAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGE---QEAILRGNAADAESFRQRF-RW 57
Query: 64 GPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHR 114
EV GP+ AL +L ELC +WLRP++HTKEQ+L T+LP EI+ W++
Sbjct: 58 FCYSEVA-GPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQH 116
Query: 115 PESSEEAAALVEDLTQTLQDSETAS 139
PESSEE L+EDLTQ L++ + S
Sbjct: 117 PESSEEVVTLIEDLTQMLEEKDPVS 141
>gi|190014620 zinc finger protein 483 isoform a [Homo sapiens]
Length = 744
Score = 86.3 bits (212), Expect = 9e-18
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 18/145 (12%)
Query: 8 RVTTPLSSLVQVPQEEDR----QEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKG 63
+ PL+ + + E ++ EV ++ + QEA+L+ + ++E F Q +
Sbjct: 2 QAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGE---QEAILRGNAADAESFRQRF-RW 57
Query: 64 GPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHR 114
EV GP+ AL +L ELC +WLRP++HTKEQ+L T+LP EI+ W++
Sbjct: 58 FCYSEVA-GPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQH 116
Query: 115 PESSEEAAALVEDLTQTLQDSETAS 139
PESSEE L+EDLTQ L++ + S
Sbjct: 117 PESSEEVVTLIEDLTQMLEEKDPVS 141
>gi|64368880 zinc finger and SCAN domain containing 25 [Homo
sapiens]
Length = 544
Score = 86.3 bits (212), Expect = 9e-18
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 9/78 (11%)
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQM---------LTMLPKEIQAWLQEHRPESSEEAA 122
GPQ AL L+ELCRRWLRPE+HTKEQ+ LT+LP+E AW++EH PES + A
Sbjct: 55 GPQEALRELQELCRRWLRPELHTKEQILELLVLEQFLTILPREFYAWIREHGPESGKALA 114
Query: 123 ALVEDLTQTLQDSETASC 140
A+VEDLT+ +++ C
Sbjct: 115 AMVEDLTERALEAKAVPC 132
>gi|254281232 zinc finger and SCAN domain containing 12 [Homo
sapiens]
Length = 611
Score = 85.5 bits (210), Expect = 1e-17
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Query: 70 TRGPQGALGRLRELCRRWLRPEVHTKEQM---------LTMLPKEIQAWLQEHRPESSEE 120
T GP+ AL RLRELC +WLRPE HTKEQ+ LT+LP+E+QAW+QE PES EE
Sbjct: 57 TSGPREALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEE 116
Query: 121 AAALVEDLTQTLQDSETASCVH 142
++EDL + L + VH
Sbjct: 117 VVTVLEDLERELDEPGEQVSVH 138
>gi|27544931 zinc finger protein 38 [Homo sapiens]
Length = 473
Score = 84.7 bits (208), Expect = 2e-17
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 11/93 (11%)
Query: 51 PESEPFPQSAGKGGPQEEVTRGPQGALGRLRELCRRWLRPEVHTKEQML---------TM 101
P E F Q + G + T GP+ AL +LR LC WLRPE+HTKEQ+L T+
Sbjct: 39 PSLEMFRQRFRQFGYHD--TPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTI 96
Query: 102 LPKEIQAWLQEHRPESSEEAAALVEDLTQTLQD 134
LP+E+QAW+QEH PES+EEA L+EDL + L +
Sbjct: 97 LPQELQAWVQEHCPESAEEAVTLLEDLERELDE 129
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 84.0 bits (206), Expect = 4e-17
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 20 PQEEDRQEEE---VTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGA 76
P E QE+E + + ED +W+QE + P E F Q Q GP+ A
Sbjct: 14 PPAETSQEQEDLFIVKVEEEDCTWMQEY----NPPTFETFYQRFRHF--QYHEASGPREA 67
Query: 77 LGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAAALVED 127
L +LR LC WLRPE+HTKEQ+L T+LP+E Q W++EH PES EEA A++E+
Sbjct: 68 LSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIEN 127
Query: 128 LTQTLQDSETASCVHGCP 145
+ + L+ E + CP
Sbjct: 128 IQRELE--ERRQQIVACP 143
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 84.0 bits (206), Expect = 4e-17
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 20 PQEEDRQEEE---VTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGA 76
P E QE+E + + ED +W+QE + P E F Q Q GP+ A
Sbjct: 14 PPAETSQEQEDLFIVKVEEEDCTWMQEY----NPPTFETFYQRFRHF--QYHEASGPREA 67
Query: 77 LGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAAALVED 127
L +LR LC WLRPE+HTKEQ+L T+LP+E Q W++EH PES EEA A++E+
Sbjct: 68 LSQLRVLCCEWLRPELHTKEQILELLVLEQFLTILPEEFQPWVREHHPESGEEAVAVIEN 127
Query: 128 LTQTLQDSETASCVHGCP 145
+ + L+ E + CP
Sbjct: 128 IQRELE--ERRQQIVACP 143
>gi|47716687 zinc finger protein 167 isoform 1 [Homo sapiens]
Length = 754
Score = 83.6 bits (205), Expect = 6e-17
Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 9/77 (11%)
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQM---------LTMLPKEIQAWLQEHRPESSEEAA 122
GPQ AL RLRELCR WL PEVHTKEQ+ L++LP E++ W+Q H PES EEA
Sbjct: 67 GPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHHPESGEEAV 126
Query: 123 ALVEDLTQTLQDSETAS 139
A+VED + L SE S
Sbjct: 127 AVVEDFQRHLSGSEEVS 143
>gi|47716685 zinc finger protein 167 isoform 2 [Homo sapiens]
Length = 276
Score = 83.6 bits (205), Expect = 6e-17
Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 9/77 (11%)
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQM---------LTMLPKEIQAWLQEHRPESSEEAA 122
GPQ AL RLRELCR WL PEVHTKEQ+ L++LP E++ W+Q H PES EEA
Sbjct: 67 GPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHHPESGEEAV 126
Query: 123 ALVEDLTQTLQDSETAS 139
A+VED + L SE S
Sbjct: 127 AVVEDFQRHLSGSEEVS 143
>gi|5454180 zinc finger protein 193 [Homo sapiens]
Length = 394
Score = 83.6 bits (205), Expect = 6e-17
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 18/142 (12%)
Query: 13 LSSLVQVPQEEDRQEEEVTTMILEDDSWVQ--EAVLQEDGPES-EPFPQSAGKGGPQEEV 69
LS VQVP+ EE+ TM +E S +Q E+ L+ P + E F + + QE
Sbjct: 9 LSLGVQVPEAW----EELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCYQE-- 62
Query: 70 TRGPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEE 120
T GP+ AL RL+ELC +WLRP V TKEQ+L ++LPKE+Q W++EH PES EE
Sbjct: 63 TPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESGEE 122
Query: 121 AAALVEDLTQTLQDSETASCVH 142
A L+EDL + L + + H
Sbjct: 123 AVILLEDLERELDEPQHEMVAH 144
>gi|190883486 zinc finger protein 390 [Homo sapiens]
Length = 389
Score = 83.2 bits (204), Expect = 7e-17
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 9/72 (12%)
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAA 122
GP+ AL RL+ELC +WLRPE+HTKEQ+L T+LP+E+QAW+++HRP S EEA
Sbjct: 61 GPREALQRLQELCHQWLRPEMHTKEQILELLVLEQFLTILPEELQAWVRQHRPVSGEEAV 120
Query: 123 ALVEDLTQTLQD 134
++EDL + L D
Sbjct: 121 TVLEDLERELDD 132
>gi|194328783 zinc finger protein 287 [Homo sapiens]
Length = 761
Score = 82.0 bits (201), Expect = 2e-16
Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 9/72 (12%)
Query: 72 GPQGALGRLRELCRRWLRPEVHTKEQML---------TMLPKEIQAWLQEHRPESSEEAA 122
GP+ AL +LRELC +WLRPE+H+KEQ+L T+LP E++ W++ PESSEEA
Sbjct: 62 GPRKALSQLRELCLKWLRPEIHSKEQILELLVLEQFLTILPGEVRTWVKSQYPESSEEAV 121
Query: 123 ALVEDLTQTLQD 134
LVEDLTQ L++
Sbjct: 122 TLVEDLTQILEE 133
>gi|31982909 zinc finger protein 394 [Homo sapiens]
Length = 561
Score = 81.6 bits (200), Expect = 2e-16
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 13/103 (12%)
Query: 51 PESEPFPQSAGKGGPQ---EEVTRGPQGALGRLRELCRRWLRPEVHTKEQM--------- 98
P + P P+++ Q +EV GP+ AL RLRELCRRWLRPE+ +KEQ+
Sbjct: 54 PAASPDPETSRLHFRQLRYQEVA-GPEEALSRLRELCRRWLRPELLSKEQILELLVLEQF 112
Query: 99 LTMLPKEIQAWLQEHRPESSEEAAALVEDLTQTLQDSETASCV 141
LT+LP+E+QAW++EH PES EEA A+V L + L + + V
Sbjct: 113 LTILPEELQAWVREHCPESGEEAVAVVRALQRALDGTSSQGMV 155
>gi|37622341 zinc finger protein 42 isoform 2 [Homo sapiens]
Length = 734
Score = 81.3 bits (199), Expect = 3e-16
Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 13/118 (11%)
Query: 20 PQEEDRQEEEVTTMILEDDSWVQEAVLQEDGPESEPFPQSAGKGGPQEEVTRGPQGALGR 79
P ++E + LED EA L + GPE+ + EE T GPQ AL +
Sbjct: 9 PDRAPPEDEGPVMVKLEDSEEEGEAALWDPGPEAARLRFRCFR---YEEAT-GPQEALAQ 64
Query: 80 LRELCRRWLRPEVHTKEQMLTM---------LPKEIQAWLQEHRPESSEEAAALVEDL 128
LRELCR+WLRPEV +KEQML + LP EIQA +Q RP S EEAAALV+ L
Sbjct: 65 LRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVDGL 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,882,651
Number of Sequences: 37866
Number of extensions: 350001
Number of successful extensions: 1723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 251
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.