Guide to the Human Genome
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Name: POLR3D Sequence: fasta or formatted (398aa) NCBI GI: 55769552
Description:

polymerase (RNA) III (DNA directed) polypeptide D

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         18           2
 C cysteine            0.8          3           1
 D aspartate           6.8         27           2
 E glutamate          10.8         43           4
 F phenylalanine       1.8          7           1
 G glycine             8.3         33           2
 H histidine           2.0          8           1
 I isoleucine          4.0         16           2
 K lysine             10.1         40           3
 L leucine            10.6         42           3
 M methionine          2.5         10           2
 N asparagine          2.0          8           1
 P proline             8.0         32           2
 Q glutamine           3.5         14           1
 R arginine            7.0         28           2
 S serine              4.5         18           1
 T threonine           5.8         23           1
 V valine              6.3         25           2
 W tryptophan          0.8          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polymerase (RNA) III (DNA directed) polypeptide D [H... 
TAF3                  0.022   RNA polymerase II transcription factor TAFII140 [Ho...
ZFP91                 0.021   zinc finger protein 91 
RNF20                 0.019   ring finger protein 20 
MAP1B                 0.019   microtubule-associated protein 1B 
TNIP1                 0.019   TNFAIP3 interacting protein 1 
AP3D1                 0.018   adaptor-related protein complex 3, delta 1 subunit ...
TRAF3IP1              0.018   TNF receptor-associated factor 3 interacting protei...
TRAF3IP1              0.018   TNF receptor-associated factor 3 interacting protein...
DVL2                  0.018   dishevelled 2 
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
TCERG1                0.018   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.018   transcription elongation regulator 1 isoform 1 [Homo...
CDC2L2                0.018   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.018   cell division cycle 2-like 1 (PITSLRE proteins) isof...
DNMT1                 0.017   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
PMFBP1                0.017   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.017   polyamine modulated factor 1 binding protein 1 isof...
TRDN                  0.017   triadin 
CREBBP                0.016   CREB binding protein isoform b 
CREBBP                0.016   CREB binding protein isoform a 
CHD7                  0.016   chromodomain helicase DNA binding protein 7 
C6orf10               0.016   chromosome 6 open reading frame 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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