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Search of human proteins with 55749804
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55749804 aminopeptidase Fxna [Homo sapiens]
(904 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55749804 aminopeptidase Fxna [Homo sapiens] 1837 0.0
gi|33589848 transferrin receptor 2 [Homo sapiens] 42 0.002
gi|92110027 glutaminyl-peptide cyclotransferase-like isoform 1 [... 40 0.013
gi|6912618 glutaminyl-peptide cyclotransferase precursor [Homo s... 38 0.049
gi|13775236 scratch [Homo sapiens] 38 0.049
gi|239756880 PREDICTED: hypothetical protein [Homo sapiens] 37 0.083
gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ... 37 0.083
gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo... 35 0.41
gi|20128768 serine/threonine kinase 35 [Homo sapiens] 34 0.54
gi|42558258 F-box protein 33 [Homo sapiens] 33 1.6
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 32 2.7
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens] 32 3.5
gi|57232740 N-acetylated alpha-linked acidic dipeptidase-like 1 ... 32 3.5
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens] 32 3.5
gi|8659574 transcription factor E3 [Homo sapiens] 31 4.6
gi|116734710 ATP-binding cassette, sub-family A member 3 [Homo s... 31 4.6
gi|170763515 DMRT-like family A1 [Homo sapiens] 31 4.6
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 31 5.9
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 31 5.9
gi|239754942 PREDICTED: hypothetical protein [Homo sapiens] 31 5.9
gi|239749484 PREDICTED: hypothetical protein [Homo sapiens] 31 5.9
gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo ... 31 5.9
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 31 5.9
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 31 5.9
gi|238776833 THO complex 4 [Homo sapiens] 30 7.8
gi|18860857 menin isoform 1 [Homo sapiens] 30 7.8
gi|18860855 menin isoform 1 [Homo sapiens] 30 7.8
gi|18860851 menin isoform 1 [Homo sapiens] 30 7.8
gi|18860849 menin isoform 1 [Homo sapiens] 30 7.8
gi|18860853 menin isoform 1 [Homo sapiens] 30 7.8
>gi|55749804 aminopeptidase Fxna [Homo sapiens]
Length = 904
Score = 1837 bits (4757), Expect = 0.0
Identities = 904/904 (100%), Positives = 904/904 (100%)
Query: 1 MEWGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGA 60
MEWGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGA
Sbjct: 1 MEWGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGA 60
Query: 61 SRGAGTGLSEVRAALGLALYLIALRTLVQLSLQQLVLRGAAGHRGEFDALQARDYLEHIT 120
SRGAGTGLSEVRAALGLALYLIALRTLVQLSLQQLVLRGAAGHRGEFDALQARDYLEHIT
Sbjct: 61 SRGAGTGLSEVRAALGLALYLIALRTLVQLSLQQLVLRGAAGHRGEFDALQARDYLEHIT 120
Query: 121 SIGPRTTGSPENEILTVHYLLEQIKLIEVQSNSLHKISVDVQRPTGSFSIDFLGGFTSYY 180
SIGPRTTGSPENEILTVHYLLEQIKLIEVQSNSLHKISVDVQRPTGSFSIDFLGGFTSYY
Sbjct: 121 SIGPRTTGSPENEILTVHYLLEQIKLIEVQSNSLHKISVDVQRPTGSFSIDFLGGFTSYY 180
Query: 181 DNITNVVVKLEPRDGAQHAVLANCHFDSVANSPGASDDAVSCSVMLEVLRVLSTSSEALH 240
DNITNVVVKLEPRDGAQHAVLANCHFDSVANSPGASDDAVSCSVMLEVLRVLSTSSEALH
Sbjct: 181 DNITNVVVKLEPRDGAQHAVLANCHFDSVANSPGASDDAVSCSVMLEVLRVLSTSSEALH 240
Query: 241 HAVIFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQ 300
HAVIFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQ
Sbjct: 241 HAVIFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQ 300
Query: 301 AYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTA 360
AYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTA
Sbjct: 301 AYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTA 360
Query: 361 DRILTDSIQRAGDNILAVLKHLATSDMLAAASKYRHGNMVFFDVLGLFVIAYPSRIGSII 420
DRILTDSIQRAGDNILAVLKHLATSDMLAAASKYRHGNMVFFDVLGLFVIAYPSRIGSII
Sbjct: 361 DRILTDSIQRAGDNILAVLKHLATSDMLAAASKYRHGNMVFFDVLGLFVIAYPSRIGSII 420
Query: 421 NYMVVMGVVLYLGKKFLQPKHKTGNYKKDFLCGLGITLISWFTSLVTVLIIAVFISLIGQ 480
NYMVVMGVVLYLGKKFLQPKHKTGNYKKDFLCGLGITLISWFTSLVTVLIIAVFISLIGQ
Sbjct: 421 NYMVVMGVVLYLGKKFLQPKHKTGNYKKDFLCGLGITLISWFTSLVTVLIIAVFISLIGQ 480
Query: 481 SLSWYNHFYVSVCLYGTATVAKIILIHTLAKRFYYMNASAQYLGEVFFDISLFVHCCFLV 540
SLSWYNHFYVSVCLYGTATVAKIILIHTLAKRFYYMNASAQYLGEVFFDISLFVHCCFLV
Sbjct: 481 SLSWYNHFYVSVCLYGTATVAKIILIHTLAKRFYYMNASAQYLGEVFFDISLFVHCCFLV 540
Query: 541 TLTYQGLCSAFISAVWVAFPLLTKLCVHKDFKQHGAQGKFIAFYLLGMFIPYLYALYLIW 600
TLTYQGLCSAFISAVWVAFPLLTKLCVHKDFKQHGAQGKFIAFYLLGMFIPYLYALYLIW
Sbjct: 541 TLTYQGLCSAFISAVWVAFPLLTKLCVHKDFKQHGAQGKFIAFYLLGMFIPYLYALYLIW 600
Query: 601 AVFEMFTPILGRSGSEIPPDVVLASILAGCTMILSSYFINFIYLAKSTKKTMLTLTLVCA 660
AVFEMFTPILGRSGSEIPPDVVLASILAGCTMILSSYFINFIYLAKSTKKTMLTLTLVCA
Sbjct: 601 AVFEMFTPILGRSGSEIPPDVVLASILAGCTMILSSYFINFIYLAKSTKKTMLTLTLVCA 660
Query: 661 ITFLLVCSGTFFPYSSNPANPKPKRVFLQHMTRTFHDLEGNAVKRDSGIWINGFDYTGIS 720
ITFLLVCSGTFFPYSSNPANPKPKRVFLQHMTRTFHDLEGNAVKRDSGIWINGFDYTGIS
Sbjct: 661 ITFLLVCSGTFFPYSSNPANPKPKRVFLQHMTRTFHDLEGNAVKRDSGIWINGFDYTGIS 720
Query: 721 HITPHIPEINDSIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEVSPRNPPHFRLISK 780
HITPHIPEINDSIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEVSPRNPPHFRLISK
Sbjct: 721 HITPHIPEINDSIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEVSPRNPPHFRLISK 780
Query: 781 EQTPWDSIKLTFEATGPSHMSFYVRAHKGSTLSQWSLGNGTPVTSKGGDYFVFYSHGLQA 840
EQTPWDSIKLTFEATGPSHMSFYVRAHKGSTLSQWSLGNGTPVTSKGGDYFVFYSHGLQA
Sbjct: 781 EQTPWDSIKLTFEATGPSHMSFYVRAHKGSTLSQWSLGNGTPVTSKGGDYFVFYSHGLQA 840
Query: 841 SAWQFWIEVQVSEEHPEGMVTVAIAAHYLSGEDKRSPQLDALKEKFPDWTFPSAWVCTYD 900
SAWQFWIEVQVSEEHPEGMVTVAIAAHYLSGEDKRSPQLDALKEKFPDWTFPSAWVCTYD
Sbjct: 841 SAWQFWIEVQVSEEHPEGMVTVAIAAHYLSGEDKRSPQLDALKEKFPDWTFPSAWVCTYD 900
Query: 901 LFVF 904
LFVF
Sbjct: 901 LFVF 904
>gi|33589848 transferrin receptor 2 [Homo sapiens]
Length = 801
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/202 (21%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 183 ITNVVVKLEPRDGAQHAVLANCHFDSVANSPGASDDAVSCSVMLEVLRVLS---TSSEAL 239
I N+ +E R H V+ D A PGA+ AV +++LE++R S ++
Sbjct: 410 INNIFGCIEGRSEPDHYVVIGAQRD--AWGPGAAKSAVGTAILLELVRTFSSMVSNGFRP 467
Query: 240 HHAVIFL-FNGAEENVLQAS---HGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPEN 295
+++F+ ++G + + ++ G+++ +++ +++L+ A +G + +T P
Sbjct: 468 RRSLLFISWDGGDFGSVGSTEWLEGYLSVLHLKAVV--YVSLDNAVLGDDKFHAKTSPLL 525
Query: 296 PWLVQA---YVSAAKHPFASVVAQEVFQSGI--------IPSDTDFRIYRDFGNIPGIDL 344
L+++ V + H ++ Q VF + +P D+ + F +P ++
Sbjct: 526 TSLIESVLKQVDSPNHSGQTLYEQVVFTNPSWDAEVIRPLPMDSSAYSFTAFVGVPAVEF 585
Query: 345 AFIENGYIY---HTKYDTADRI 363
+F+E+ Y HTK DT + +
Sbjct: 586 SFMEDDQAYPFLHTKEDTYENL 607
>gi|92110027 glutaminyl-peptide cyclotransferase-like isoform 1
[Homo sapiens]
Length = 382
Score = 39.7 bits (91), Expect = 0.013
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 185 NVVVKLEPRDGAQHAVLANCHFDSVANSPG------ASDDAVSCSVMLEVLRVL 232
NVV L+PR A+H LA CH+DS PG A+D AV C+++LE+ + L
Sbjct: 150 NVVATLDPR-AARHLTLA-CHYDSKLFPPGSTPFVGATDSAVPCALLLELAQAL 201
>gi|6912618 glutaminyl-peptide cyclotransferase precursor [Homo
sapiens]
Length = 361
Score = 37.7 bits (86), Expect = 0.049
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 180 YDNITNVVVKLEPRDGAQHAVLANCHFDSVANSP-------GASDDAVSCSVMLEVLRVL 232
Y + +N++ L P +H VLA CH+DS S GA+D AV C++MLE+ R L
Sbjct: 117 YRSFSNIISTLNPT-AKRHLVLA-CHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 174
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 37.7 bits (86), Expect = 0.049
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 22 GAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLA 78
G+AAAP A G GGR+ PGG GG GAGT E RA G A
Sbjct: 132 GSAAAPSTASAAAPDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGT---EARAGPGAA 185
>gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
Length = 376
Score = 37.0 bits (84), Expect = 0.083
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 7 SAAVRRHRVGVERREGAA---AAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRG 63
S +R VG ER GA +APP +AR Q SGG RS GS +
Sbjct: 250 SPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPR 309
Query: 64 AGTGLSEVRAA 74
GL + RAA
Sbjct: 310 PPAGLGDARAA 320
>gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo
sapiens]
Length = 376
Score = 37.0 bits (84), Expect = 0.083
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 7 SAAVRRHRVGVERREGAA---AAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRG 63
S +R VG ER GA +APP +AR Q SGG RS GS +
Sbjct: 250 SPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPR 309
Query: 64 AGTGLSEVRAA 74
GL + RAA
Sbjct: 310 PPAGLGDARAA 320
>gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo
sapiens]
Length = 1543
Score = 34.7 bits (78), Expect = 0.41
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 417 GSIINYMVVMGVVLYLGKKFLQPKHK--------TGNYKKDFLCGLGITLIS-WFTSLVT 467
GSI ++ V ++G + K +G + + CG + I +F L +
Sbjct: 935 GSIFLLLITNCVSPFIGMSSISDYKKNVQSQLWISGLWPSAYWCGQALVDIPLYFLILFS 994
Query: 468 VLIIAVFISLIGQSLSWYNHFYVSVCLYGTATVAKIILIHTLAKRFYYMNASAQYLGEVF 527
+ +I FI L G LSW F + VC+ G A V+ I L + L+ F + + F
Sbjct: 995 IHLIYYFIFL-GFQLSWELMFVLVVCIIGCA-VSLIFLTYVLSFIFRKWRKNNGFWSFGF 1052
Query: 528 FDISLFVHCCFLVTLTYQG----LCSAFISAVWVAFPLL--TKLCVHKDFKQH-----GA 576
F I + V +V+ Y+ LC FI +F LL L + DF ++
Sbjct: 1053 FIILICV-STIMVSTQYEKLNLILCMIFIP----SFTLLGYVMLLIQLDFMRNLDSLDNR 1107
Query: 577 QGKFIAFYLLGMFIPYLYALYLIWAV 602
+ LL IPYL ++ ++ +
Sbjct: 1108 INEVNKTILLTTLIPYLQSVIFLFVI 1133
>gi|20128768 serine/threonine kinase 35 [Homo sapiens]
Length = 401
Score = 34.3 bits (77), Expect = 0.54
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 1 MEWGSESAAVRRHRVGVERREGAAAAPP----PEREARAQEPLVDGCSGGGRTRKRSPGG 56
ME G + A +RR AP P ARA +P+ G +R P G
Sbjct: 1 METGKDGARRGTQSPERKRRSPVPRAPSTKLRPAAAARAMDPVAAEAPGEAFLARRRPEG 60
Query: 57 SGGASRGAGTGLSEV-RAALGLALYLIALRTLVQLSLQQL 95
GG++R + L+E+ R + G+ +A R+ +++++++
Sbjct: 61 GGGSARPRYSLLAEIGRGSYGVVYEAVAGRSGARVAVKKI 100
>gi|42558258 F-box protein 33 [Homo sapiens]
Length = 555
Score = 32.7 bits (73), Expect = 1.6
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 31 REARAQEPLVDGCSGGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLALYLIALRTLVQL 90
RE R + + SGGG PG GGA GTG EV A A +L LRT ++L
Sbjct: 137 RELRVEFAAENYLSGGG------PGDGGGAD--TGTGGEEVEALQLSARWLEVLRTYLEL 188
Query: 91 SLQQLV 96
L LV
Sbjct: 189 VLCVLV 194
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
Length = 2365
Score = 32.0 bits (71), Expect = 2.7
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 4 GSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPG 55
GS RH + E A PPP R A+ Q CS GGRT SPG
Sbjct: 1254 GSAPPGETRHNLEREEYTVLADLPPPRRLAQRQPGPQAQCSSGGRT--HSPG 1303
>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 31.6 bits (70), Expect = 3.5
Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 20/94 (21%)
Query: 15 VGVERREGAAAAPPP----------EREARAQEPLVDGCSGGGRTRKRSP-------GGS 57
+G +RR A A PP + R + P CS R R+ SP GG
Sbjct: 170 LGDQRRLPPATAAPPWASSATAWRLPQPRRRRRPTCPCCS---RCRELSPPMGPDLGGGG 226
Query: 58 GGASRGAGTGLSEVRAALGLALYLIALRTLVQLS 91
GGA GAG G R+A A L L L +S
Sbjct: 227 GGAGAGAGAGAGAQRSAAEAAGCLGCLPRLPLMS 260
>gi|57232740 N-acetylated alpha-linked acidic dipeptidase-like 1
[Homo sapiens]
Length = 740
Score = 31.6 bits (70), Expect = 3.5
Identities = 55/235 (23%), Positives = 89/235 (37%), Gaps = 36/235 (15%)
Query: 163 RPTGSFSIDFLGGFTSY----YDNITNVVVKLEPRDGAQHAVLANCHFDSVANSPGASDD 218
RP G F D + Y N +NV+ + VL H DS + GA D
Sbjct: 322 RPDGDFPADSQVNVSVYNRLELRNSSNVLGIIRGAVEPDRYVLYGNHRDSWVH--GAVDP 379
Query: 219 AVSCSVMLEVLRVLST----SSEALHHAVIFLFNGAEENVLQASHGFITQ--HPWASLIR 272
+ +V+LE+ RVL T + +++F GAEE L S F + +
Sbjct: 380 SSGTAVLLELSRVLGTLLKKGTWRPRRSIVFASWGAEEFGLIGSTEFTEEFFNKLQERTV 439
Query: 273 AFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHP----------------FASVVAQ 316
A+IN++ + L Q P +V + + P +S V
Sbjct: 440 AYINVDISVFANATLRVQGTPPVQSVVFSATKEIRSPGPGDLSIYDNWIRYFNRSSPVYG 499
Query: 317 EVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGY--------IYHTKYDTADRI 363
V G + + +D+ + F I +D+A+ + YHT +DT D +
Sbjct: 500 LVPSLGSLGAGSDYAPFVHFLGISSMDIAYTYDRSKTSARIYPTYHTAFDTFDYV 554
>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
Length = 894
Score = 31.6 bits (70), Expect = 3.5
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 21/132 (15%)
Query: 759 NWYLPAPEVSPRNPPHFRLISKEQTPWDSIKLTFEATGPSHMSFYVRAHKGSTLSQWSLG 818
NW E PH T + ++++ ++ M V A+K + + W
Sbjct: 45 NWGEYLEETGASAAPH--------TSFKHVEISIQSNFQPGMKLEV-ANKNNPDTYWV-- 93
Query: 819 NGTPVTSKGGDYFVFYSHGLQASAWQFWIEVQVSEEHPEGMVTVAIAAHYLSGEDKRSPQ 878
T +T+ G + Y + FW +V +++ HP G T +K
Sbjct: 94 -ATIITTCGQLLLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQ---------NNKVLMP 143
Query: 879 LDALKEKFPDWT 890
DA+KEK+ DWT
Sbjct: 144 PDAIKEKYTDWT 155
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 31.2 bits (69), Expect = 4.6
Identities = 18/37 (48%), Positives = 19/37 (51%)
Query: 18 ERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSP 54
ERRE AAAAP P + V G S GG T R P
Sbjct: 132 ERREQAAAAPFPSPAPASPAISVVGVSAGGHTLSRPP 168
>gi|116734710 ATP-binding cassette, sub-family A member 3 [Homo
sapiens]
Length = 1704
Score = 31.2 bits (69), Expect = 4.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 585 LLGMFIPYLYALYLIWAVFEMF-TPILGRSGSEIPPDVVLASILAGCTMILSSYFINFIY 643
LL I +L L+ VF+ F R G D +L +L G +I Y +NF +
Sbjct: 1146 LLWDLISFLIPSLLLLVVFKAFDVRAFTRDGHMA--DTLLLLLLYGWAIIPLMYLMNFFF 1203
Query: 644 LAKSTKKTMLTLTLVCA--ITFLLV 666
L +T T LT+ + + TFL+V
Sbjct: 1204 LGAATAYTRLTIFNILSGIATFLMV 1228
>gi|170763515 DMRT-like family A1 [Homo sapiens]
Length = 504
Score = 31.2 bits (69), Expect = 4.6
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 30 EREARAQEPLVDGCSG----------GGRTRKRSPGGSGGASRGAGTGLSEVRAALGLA 78
E EAR + L+ CSG GG R +P +GG + GA GL +R A G A
Sbjct: 150 ESEARGLQRLL--CSGLSWPPGGRASGGGGRAENPQSTGGPAAGAALGLGALRQASGSA 206
>gi|71274109 nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 30.8 bits (68), Expect = 5.9
Identities = 20/49 (40%), Positives = 22/49 (44%)
Query: 42 GCSGGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLALYLIALRTLVQL 90
G GGG R R P SGGA RG G + + ALRTL L
Sbjct: 39 GRGGGGAIRVRRPCWSGGAGRGGGPAWAVRLPTVTAGWTWPALRTLSSL 87
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 30.8 bits (68), Expect = 5.9
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 21 EGAAAAPPP------EREARAQEPLVDGC-SGGGRTRKRSPGGSGGA-SRGAGTGLSE 70
E APPP E A A+ G GGR R + GG+GGA +GAG G +E
Sbjct: 272 ENGHCAPPPADVEPDESSAAAERRRRRGALRRGGRRRAGAEGGAGGADGQGAGPGAAE 329
>gi|239754942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 30.8 bits (68), Expect = 5.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 19 RREGAAAAPPPEREARA-QEPLVDGCSGGGRTRKRSPGGSGGASRGAGT 66
RR+G+ AAP P+R G GG T G + GA+ AGT
Sbjct: 48 RRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGT 96
>gi|239749484 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 30.8 bits (68), Expect = 5.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 19 RREGAAAAPPPEREARA-QEPLVDGCSGGGRTRKRSPGGSGGASRGAGT 66
RR+G+ AAP P+R G GG T G + GA+ AGT
Sbjct: 48 RRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGT 96
>gi|239743622 PREDICTED: hypothetical protein XP_002342908 [Homo
sapiens]
Length = 145
Score = 30.8 bits (68), Expect = 5.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 19 RREGAAAAPPPEREARA-QEPLVDGCSGGGRTRKRSPGGSGGASRGAGT 66
RR+G+ AAP P+R G GG T G + GA+ AGT
Sbjct: 48 RRDGSQAAPGPDRSRHVWWSRTTLGKRGGNSTGSGGTGAAAGAASSAGT 96
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 30.8 bits (68), Expect = 5.9
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 43 CSGGGRTRKRSPG-----GSGGASRGAGTGLSEVRAAL 75
C G G R R PG G GG G G G VR AL
Sbjct: 10 CPGPGSARGRFPGRPRGAGGGGGRGGRGNGAERVRVAL 47
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 30.8 bits (68), Expect = 5.9
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 45 GGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLALYLIALRTLVQLSLQQLVLRG 99
GGG K + G GG R A T S +AL L L + + + L +Q L+G
Sbjct: 9 GGGDAGKGNAAGGGGGGRSATTAGSRAVSALCLLLSVGSAAACLLLGVQAAALQG 63
>gi|238776833 THO complex 4 [Homo sapiens]
Length = 264
Score = 30.4 bits (67), Expect = 7.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 42 GCSGGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLALYLIALRTLVQLS 91
G GGG TR+ + GG+ G RGAG + +A L L A + S
Sbjct: 215 GFGGGGGTRRGTRGGARGRGRGAGRNSKQQLSAEELDAQLDAYNARMDTS 264
>gi|18860857 menin isoform 1 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 3 WGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASR 62
WG E+ RR RRE PPP ++ + L G ++ PG G +R
Sbjct: 476 WGEEAREGRRRG---PRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTAR 532
Query: 63 GAGTG 67
G G
Sbjct: 533 GPEGG 537
>gi|18860855 menin isoform 1 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 3 WGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASR 62
WG E+ RR RRE PPP ++ + L G ++ PG G +R
Sbjct: 476 WGEEAREGRRRG---PRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTAR 532
Query: 63 GAGTG 67
G G
Sbjct: 533 GPEGG 537
>gi|18860851 menin isoform 1 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 3 WGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASR 62
WG E+ RR RRE PPP ++ + L G ++ PG G +R
Sbjct: 476 WGEEAREGRRRG---PRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTAR 532
Query: 63 GAGTG 67
G G
Sbjct: 533 GPEGG 537
>gi|18860849 menin isoform 1 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 3 WGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASR 62
WG E+ RR RRE PPP ++ + L G ++ PG G +R
Sbjct: 476 WGEEAREGRRRG---PRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTAR 532
Query: 63 GAGTG 67
G G
Sbjct: 533 GPEGG 537
>gi|18860853 menin isoform 1 [Homo sapiens]
Length = 615
Score = 30.4 bits (67), Expect = 7.8
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 3 WGSESAAVRRHRVGVERREGAAAAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASR 62
WG E+ RR RRE PPP ++ + L G ++ PG G +R
Sbjct: 476 WGEEAREGRRRG---PRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTAR 532
Query: 63 GAGTG 67
G G
Sbjct: 533 GPEGG 537
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,857,347
Number of Sequences: 37866
Number of extensions: 1595846
Number of successful extensions: 5833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 5804
Number of HSP's gapped (non-prelim): 55
length of query: 904
length of database: 18,247,518
effective HSP length: 111
effective length of query: 793
effective length of database: 14,044,392
effective search space: 11137202856
effective search space used: 11137202856
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.