Search of human proteins with 55743112

Search of human proteins with 55743112

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55743112 NAD kinase [Homo sapiens]
         (446 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55743112 NAD kinase [Homo sapiens]                                 904   0.0  
gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo sapi...    34   0.24 
gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8...    33   0.68 
gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8...    33   0.68 
gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8 ...    33   0.68 
gi|118600967 shroom family member 4 [Homo sapiens]                     32   1.2  
gi|188528663 solute carrier organic anion transporter family, me...    31   2.0  
gi|168823443 RAD54-like 2 [Homo sapiens]                               30   5.8  
gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]            29   7.6  
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]            29   7.6  
gi|209954811 zinc finger protein 507 [Homo sapiens]                    29   7.6  
gi|55925468 zinc finger protein 507 [Homo sapiens]                     29   7.6  
gi|49574508 N-Acetylglucosamine kinase [Homo sapiens]                  29   7.6  
gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens]                29   9.9  
gi|38348368 hypothetical protein LOC374872 [Homo sapiens]              29   9.9  
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi...    29   9.9  
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi...    29   9.9  
gi|8922301 WD repeat domain 70 [Homo sapiens]                          29   9.9  

>gi|55743112 NAD kinase [Homo sapiens]
          Length = 446

 Score =  904 bits (2335), Expect = 0.0
 Identities = 446/446 (100%), Positives = 446/446 (100%)

Query: 1   MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFR 60
           MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFR
Sbjct: 1   MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFR 60

Query: 61  RTRSLHGPCPVTTFGPKACVLQNPQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQ 120
           RTRSLHGPCPVTTFGPKACVLQNPQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQ
Sbjct: 61  RTRSLHGPCPVTTFGPKACVLQNPQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQ 120

Query: 121 PFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 180
           PFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC
Sbjct: 121 PFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 180

Query: 181 LGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRL 240
           LGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRL
Sbjct: 181 LGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRL 240

Query: 241 KVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVD 300
           KVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVD
Sbjct: 241 KVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVD 300

Query: 301 VYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVV 360
           VYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVV
Sbjct: 301 VYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVV 360

Query: 361 PAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFES 420
           PAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFES
Sbjct: 361 PAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFES 420

Query: 421 LAQCLHWNVRKKQAHFEEEEEEEEEG 446
           LAQCLHWNVRKKQAHFEEEEEEEEEG
Sbjct: 421 LAQCLHWNVRKKQAHFEEEEEEEEEG 446


>gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo
           sapiens]
          Length = 442

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 16/180 (8%)

Query: 165 REDYDDISNQ-IDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG---SLGFL-TPFSF-E 218
           R +YD+ + +  D +I  GGDGT+L A+S     + PV+  +     S G L  P  +  
Sbjct: 141 RREYDEETVRWADAVIAAGGDGTMLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTH 200

Query: 219 NFQSQVTQVIEGNAAVVLRSRLKV--------RVVKELRGKKTAV--HNGLGENGSQAAG 268
           +F   + +   G    + R R+++         V  +L  ++ ++  HN           
Sbjct: 201 SFPEALQKFYRGEFRWLWRQRIRLYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDE 260

Query: 269 LDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYA 328
                G Q +  + LNEV I    SS  S  ++ +D       +  G+ + T TGS A++
Sbjct: 261 RSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWS 320


>gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8
           isoform alpha [Homo sapiens]
          Length = 351

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 319 STPTGSTAYAAAAGASMIHPNV-PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNT 377
           S P G    A   G  M +PN+ P + +TP+ P +++  P   PA    + +  P+ +  
Sbjct: 276 SQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKY 335

Query: 378 AWVSFDGRK 386
           A  ++ G+K
Sbjct: 336 AKEAWPGKK 344


>gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8
           isoform beta/delta [Homo sapiens]
          Length = 209

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 319 STPTGSTAYAAAAGASMIHPNV-PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNT 377
           S P G    A   G  M +PN+ P + +TP+ P +++  P   PA    + +  P+ +  
Sbjct: 134 SQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKY 193

Query: 378 AWVSFDGRK 386
           A  ++ G+K
Sbjct: 194 AKEAWPGKK 202


>gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8
           isoform gamma [Homo sapiens]
          Length = 127

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 319 STPTGSTAYAAAAGASMIHPNV-PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNT 377
           S P G    A   G  M +PN+ P + +TP+ P +++  P   PA    + +  P+ +  
Sbjct: 52  SQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKY 111

Query: 378 AWVSFDGRK 386
           A  ++ G+K
Sbjct: 112 AKEAWPGKK 120


>gi|118600967 shroom family member 4 [Homo sapiens]
          Length = 1493

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 25/107 (23%)

Query: 350  PHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEI------RHGDSISITTSCY 403
            PH L  R     A  E  I L+P++   AW    G+ R+E+         D +      +
Sbjct: 1050 PHPLRSR-----AFSESHISLAPQSTR-AW----GQHRRELFSKGDETQSDLLGARKKAF 1099

Query: 404  PLPSICVRDPVSDW-----FESLAQCLHWNVRKKQAHFEEEEEEEEE 445
            P P    R P  +W     F +  Q      ++KQ   EEEEEEEEE
Sbjct: 1100 PPP----RPPPPNWEKYRLFRAAQQQKQQQQQQKQQEEEEEEEEEEE 1142


>gi|188528663 solute carrier organic anion transporter family,
           member 2A1 [Homo sapiens]
          Length = 643

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)

Query: 319 STPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNTA 378
           STPT +  Y  +  +S IHP  PA      CP S+ F P+    G+E    LSP     +
Sbjct: 421 STPTVAEVYPPSTSSS-IHPQSPACRRDCSCPDSI-FHPVCGDNGIE---YLSPCHAGCS 475

Query: 379 WVSFDGRKRQEIRH-------GDSISITTSCYPLP 406
            ++      +++ +       G S S  T   P+P
Sbjct: 476 NINMSSATSKQLIYLNCSCVTGGSASAKTGSCPVP 510


>gi|168823443 RAD54-like 2 [Homo sapiens]
          Length = 1467

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 284  NEVVIDRGPSSY-LSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGAS----MIHP 338
            N + +   PS Y LSN+    D  L+  V  D ++ + P  S++ A +  AS    M++P
Sbjct: 1316 NSLFMGSTPSYYQLSNL--LADARLVFPVTTDPLVPAGPVSSSSTATSVTASNPSFMLNP 1373

Query: 339  NVPAIMITPICPHS 352
            +VP I+ +   P S
Sbjct: 1374 SVPGILPSYSLPFS 1387


>gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 318 VSTPTGSTAYAAAAGASMIHPNVPAIMITPICP-----HSLSFRPIVVPA---GVELKIM 369
           VS+P       AA  A ++    PA+   P CP      S S +P V PA   GV   + 
Sbjct: 523 VSSPLPRVQPPAACPAPLLRVQPPAVSSPPACPAPATQGSRSQQPTVQPASVSGVLDTLC 582

Query: 370 LSPEARNTAWVSFDGRKRQEI 390
           L P   N    +  GR R+ +
Sbjct: 583 LEPRYWNLCAWAMGGRLREAL 603


>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 318 VSTPTGSTAYAAAAGASMIHPNVPAIMITPICP-----HSLSFRPIVVPA---GVELKIM 369
           VS+P       AA  A ++    PA+   P CP      S S +P V PA   GV   + 
Sbjct: 523 VSSPLPRVQPPAACPAPLLRVQPPAVSSPPACPAPATQGSRSQQPTVQPASVSGVLDTLC 582

Query: 370 LSPEARNTAWVSFDGRKRQEI 390
           L P   N    +  GR R+ +
Sbjct: 583 LEPRYWNLCAWAMGGRLREAL 603


>gi|209954811 zinc finger protein 507 [Homo sapiens]
          Length = 953

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)

Query: 84  PQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVL 143
           P  ++H+    S+ +   KS K +L+ KK       +P     TH +E   +  +  KV+
Sbjct: 41  PDPLIHVIQKLSKIVENEKSQKCLLIGKK-------RPRSSAATHSLETQELCEIPAKVI 93

Query: 144 EDPA 147
           + PA
Sbjct: 94  QSPA 97


>gi|55925468 zinc finger protein 507 [Homo sapiens]
          Length = 953

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)

Query: 84  PQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVL 143
           P  ++H+    S+ +   KS K +L+ KK       +P     TH +E   +  +  KV+
Sbjct: 41  PDPLIHVIQKLSKIVENEKSQKCLLIGKK-------RPRSSAATHSLETQELCEIPAKVI 93

Query: 144 EDPA 147
           + PA
Sbjct: 94  QSPA 97


>gi|49574508 N-Acetylglucosamine kinase [Homo sapiens]
          Length = 344

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 10/77 (12%)

Query: 265 QAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGS 324
           ++ GL +  G Q    ++L E + DR P  YLS      + +LITT     +  +TP G 
Sbjct: 69  RSLGLSLSGGDQEDAGRILIEELRDRFP--YLS------ESYLITTDAAGSIATATPDGG 120

Query: 325 TAYAAAAGAS--MIHPN 339
               +  G++  +I+P+
Sbjct: 121 VVLISGTGSNCRLINPD 137


>gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens]
          Length = 501

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 426 HWNVRKKQAHFEEEEEEEEE 445
           H NV++KQA   EE EEEEE
Sbjct: 342 HENVQRKQARTGEEREEEEE 361


>gi|38348368 hypothetical protein LOC374872 [Homo sapiens]
          Length = 473

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 345 ITPIC-PHSLSFRPIVVPAGVELKIMLSPEARNTA 378
           + P C P  L+F P   P G+ L+ + SPEA +TA
Sbjct: 103 VGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTA 137


>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
           sapiens]
          Length = 678

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 12/62 (19%)

Query: 385 RKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLHWNVRKKQAHFEEEEEEEE 444
           RK+ +I   D    TT  YP  S            SL Q    + ++++   EEEEEEEE
Sbjct: 512 RKKMKISFNDKSLQTTFEYPSES------------SLEQEEEVDQQEEEEEEEEEEEEEE 559

Query: 445 EG 446
           EG
Sbjct: 560 EG 561


>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
           sapiens]
          Length = 650

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 12/62 (19%)

Query: 385 RKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLHWNVRKKQAHFEEEEEEEE 444
           RK+ +I   D    TT  YP  S            SL Q    + ++++   EEEEEEEE
Sbjct: 512 RKKMKISFNDKSLQTTFEYPSES------------SLEQEEEVDQQEEEEEEEEEEEEEE 559

Query: 445 EG 446
           EG
Sbjct: 560 EG 561


>gi|8922301 WD repeat domain 70 [Homo sapiens]
          Length = 654

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 404 PLPSICVRDPVSDWFESLAQCLHWNVRKKQAHFEEEEEEEEE 445
           PLP   V  PV+   E +   L   + +++   EEEEEEEEE
Sbjct: 121 PLPPKMVGKPVNFMEEDILGPLPPPLNEEEEEAEEEEEEEEE 162


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,933,005
Number of Sequences: 37866
Number of extensions: 823473
Number of successful extensions: 4192
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4155
Number of HSP's gapped (non-prelim): 32
length of query: 446
length of database: 18,247,518
effective HSP length: 105
effective length of query: 341
effective length of database: 14,271,588
effective search space: 4866611508
effective search space used: 4866611508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.