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Search of human proteins with 55741645
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55741645 archaelysin family metallopeptidase 1 [Homo
sapiens]
(498 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55741645 archaelysin family metallopeptidase 1 [Homo sapiens] 1023 0.0
gi|75812972 archaemetzincins-2 isoform 1 [Homo sapiens] 211 2e-54
gi|75812966 archaemetzincins-2 isoform 1 [Homo sapiens] 211 2e-54
gi|75812970 archaemetzincins-2 isoform 1 [Homo sapiens] 211 2e-54
gi|75812974 archaemetzincins-2 isoform 1 [Homo sapiens] 211 2e-54
gi|75812968 archaemetzincins-2 isoform 1 [Homo sapiens] 211 2e-54
gi|75812976 archaemetzincins-2 isoform 2 [Homo sapiens] 153 4e-37
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 38 0.024
gi|118918426 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 36 0.093
gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens] 35 0.21
gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo sap... 34 0.27
gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo sap... 34 0.27
gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo sap... 34 0.27
gi|239745488 PREDICTED: hypothetical protein XP_002343476 isofor... 34 0.27
gi|239745486 PREDICTED: hypothetical protein XP_002343475 isofor... 34 0.27
gi|239745484 PREDICTED: hypothetical protein XP_002343474 isofor... 34 0.27
gi|119120918 coiled-coil domain containing 64 [Homo sapiens] 34 0.35
gi|30795231 brain abundant, membrane attached signal protein 1 [... 33 0.60
gi|49355807 leucine zipper, down-regulated in cancer 1-like [Hom... 32 1.3
gi|18079216 CASK interacting protein 1 [Homo sapiens] 31 2.3
gi|18379332 WW domain-containing adapter with a coiled-coil regi... 31 2.3
gi|211971072 FERM and PDZ domain containing 4 [Homo sapiens] 31 2.3
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 31 2.3
gi|21389577 hypothetical protein LOC146705 [Homo sapiens] 31 2.3
gi|148612825 Rap GTPase interactor [Homo sapiens] 31 3.0
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 31 3.0
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 31 3.0
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 30 3.9
gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo sapi... 30 3.9
gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens] 30 3.9
>gi|55741645 archaelysin family metallopeptidase 1 [Homo sapiens]
Length = 498
Score = 1023 bits (2646), Expect = 0.0
Identities = 498/498 (100%), Positives = 498/498 (100%)
Query: 1 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI 60
MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
Sbjct: 1 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI 60
Query: 61 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT 120
RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
Sbjct: 61 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT 120
Query: 121 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL 180
EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
Sbjct: 121 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL 180
Query: 181 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD 240
SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
Sbjct: 181 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD 240
Query: 241 RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL 300
RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
Sbjct: 241 RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL 300
Query: 301 RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP 360
RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
Sbjct: 301 RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP 360
Query: 361 GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
Sbjct: 361 GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
Query: 421 EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA 480
EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA
Sbjct: 421 EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA 480
Query: 481 RKLARAESAPRPWDGEES 498
RKLARAESAPRPWDGEES
Sbjct: 481 RKLARAESAPRPWDGEES 498
>gi|75812972 archaemetzincins-2 isoform 1 [Homo sapiens]
Length = 360
Score = 211 bits (536), Expect = 2e-54
Identities = 129/408 (31%), Positives = 197/408 (48%), Gaps = 58/408 (14%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDL--SEEPVGSSLLHQLCSCTEAFFLGLRVKCL 132
+DF+ F + + P ++ IY+Q I + + + L +A+F GLRVK L
Sbjct: 68 QDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLL 127
Query: 133 PSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFT 192
V + RCS R + ++ LQ+H IL FLK KP DA CV+G+T+ DLYP ++W+F
Sbjct: 128 EPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFV 187
Query: 193 FSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGM 252
F + VG+ SFAR+ +F L + ++ + + D + +++ +
Sbjct: 188 FGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLL 245
Query: 253 VQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLI 312
++ CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++
Sbjct: 246 LRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIV 305
Query: 313 ERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDA 372
ERY+ L W ES PG TP+
Sbjct: 306 ERYKALVRWIDD------------------------------ESSDTPGA------TPEH 329
Query: 373 GSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 330 SHEDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 360
>gi|75812966 archaemetzincins-2 isoform 1 [Homo sapiens]
Length = 360
Score = 211 bits (536), Expect = 2e-54
Identities = 129/408 (31%), Positives = 197/408 (48%), Gaps = 58/408 (14%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDL--SEEPVGSSLLHQLCSCTEAFFLGLRVKCL 132
+DF+ F + + P ++ IY+Q I + + + L +A+F GLRVK L
Sbjct: 68 QDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLL 127
Query: 133 PSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFT 192
V + RCS R + ++ LQ+H IL FLK KP DA CV+G+T+ DLYP ++W+F
Sbjct: 128 EPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFV 187
Query: 193 FSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGM 252
F + VG+ SFAR+ +F L + ++ + + D + +++ +
Sbjct: 188 FGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLL 245
Query: 253 VQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLI 312
++ CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++
Sbjct: 246 LRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIV 305
Query: 313 ERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDA 372
ERY+ L W ES PG TP+
Sbjct: 306 ERYKALVRWIDD------------------------------ESSDTPGA------TPEH 329
Query: 373 GSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 330 SHEDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 360
>gi|75812970 archaemetzincins-2 isoform 1 [Homo sapiens]
Length = 360
Score = 211 bits (536), Expect = 2e-54
Identities = 129/408 (31%), Positives = 197/408 (48%), Gaps = 58/408 (14%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDL--SEEPVGSSLLHQLCSCTEAFFLGLRVKCL 132
+DF+ F + + P ++ IY+Q I + + + L +A+F GLRVK L
Sbjct: 68 QDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLL 127
Query: 133 PSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFT 192
V + RCS R + ++ LQ+H IL FLK KP DA CV+G+T+ DLYP ++W+F
Sbjct: 128 EPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFV 187
Query: 193 FSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGM 252
F + VG+ SFAR+ +F L + ++ + + D + +++ +
Sbjct: 188 FGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLL 245
Query: 253 VQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLI 312
++ CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++
Sbjct: 246 LRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIV 305
Query: 313 ERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDA 372
ERY+ L W ES PG TP+
Sbjct: 306 ERYKALVRWIDD------------------------------ESSDTPGA------TPEH 329
Query: 373 GSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 330 SHEDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 360
>gi|75812974 archaemetzincins-2 isoform 1 [Homo sapiens]
Length = 360
Score = 211 bits (536), Expect = 2e-54
Identities = 129/408 (31%), Positives = 197/408 (48%), Gaps = 58/408 (14%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDL--SEEPVGSSLLHQLCSCTEAFFLGLRVKCL 132
+DF+ F + + P ++ IY+Q I + + + L +A+F GLRVK L
Sbjct: 68 QDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLL 127
Query: 133 PSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFT 192
V + RCS R + ++ LQ+H IL FLK KP DA CV+G+T+ DLYP ++W+F
Sbjct: 128 EPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFV 187
Query: 193 FSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGM 252
F + VG+ SFAR+ +F L + ++ + + D + +++ +
Sbjct: 188 FGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLL 245
Query: 253 VQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLI 312
++ CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++
Sbjct: 246 LRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIV 305
Query: 313 ERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDA 372
ERY+ L W ES PG TP+
Sbjct: 306 ERYKALVRWIDD------------------------------ESSDTPGA------TPEH 329
Query: 373 GSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 330 SHEDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 360
>gi|75812968 archaemetzincins-2 isoform 1 [Homo sapiens]
Length = 360
Score = 211 bits (536), Expect = 2e-54
Identities = 129/408 (31%), Positives = 197/408 (48%), Gaps = 58/408 (14%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDL--SEEPVGSSLLHQLCSCTEAFFLGLRVKCL 132
+DF+ F + + P ++ IY+Q I + + + L +A+F GLRVK L
Sbjct: 68 QDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTGYCKAYFYGLRVKLL 127
Query: 133 PSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFT 192
V + RCS R + ++ LQ+H IL FLK KP DA CV+G+T+ DLYP ++W+F
Sbjct: 128 EPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFV 187
Query: 193 FSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGM 252
F + VG+ SFAR+ +F L + ++ + + D + +++ +
Sbjct: 188 FGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLL 245
Query: 253 VQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLI 312
++ CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++
Sbjct: 246 LRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIV 305
Query: 313 ERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDA 372
ERY+ L W ES PG TP+
Sbjct: 306 ERYKALVRWIDD------------------------------ESSDTPGA------TPEH 329
Query: 373 GSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 330 SHEDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 360
>gi|75812976 archaemetzincins-2 isoform 2 [Homo sapiens]
Length = 302
Score = 153 bits (386), Expect = 4e-37
Identities = 114/406 (28%), Positives = 171/406 (42%), Gaps = 112/406 (27%)
Query: 15 RALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLIRTGFDWLLSRPEAP 74
+ LK AL+S + L Y + +RL + EA+ P LF + + + DW+ S PEAP
Sbjct: 9 QTLKTALISKNPVLVSQYEKLNAGEQRL-MNEAFQPASDLFGPITLHSPSDWITSHPEAP 67
Query: 75 EDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCTEAFFLGLRVKCLPS 134
+DF E FF
Sbjct: 68 QDF-------------------------------------------EQFF---------- 74
Query: 135 VAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTLSDLYPHEAWSFTFS 194
+ R + P++ S +Q D IL FLK KP DA CV+G+T+ DLYP ++W+F F
Sbjct: 75 --SDPYRKTPSPNKRSIYIQSIGD-ILKFLKKKKPEDAFCVVGITMIDLYPRDSWNFVFG 131
Query: 195 KFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQDRGWALCFSALGMVQ 254
+ VG+ SFAR+ +F L + ++ + + D + +++ +++
Sbjct: 132 QASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSIFDNYYIPEITSVLLLR 189
Query: 255 CCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICLRKLQHVLGFRLIER 314
CK HE+ H+ GL +C+WL CLMQG+ L+EA RRPL+LCPICL KLQ +GF ++ER
Sbjct: 190 SCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPICLHKLQCAVGFSIVER 249
Query: 315 YQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGS 374
Y+ L W ES PG TP+
Sbjct: 250 YKALVRWIDD------------------------------ESSDTPGA------TPEHSH 273
Query: 375 HTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR 420
+ P+ P EA KE + W+ C+ LQ+
Sbjct: 274 EDNGNLPK-----------------PVEAFKEWKEWIIKCLAVLQK 302
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 37.7 bits (86), Expect = 0.024
Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 22/92 (23%)
Query: 327 GTWPSQEAGEPSV---WEDTPPASADSGM-------CCESDSEP---GTSVSEPLTP--- 370
GTWP G P + W PPAS S SDSEP G SEP TP
Sbjct: 959 GTWPHPRPGPPPLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPPASGDLCSEPSTPASP 1018
Query: 371 ---DAGSHTFASGPEEGLSYLAASEAPLPPGG 399
+ G+ T GP E +S A+ PP G
Sbjct: 1019 PPSEEGART---GPAEPVSQAEATSTGEPPPG 1047
>gi|118918426 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 6 [Homo
sapiens]
Length = 384
Score = 35.8 bits (81), Expect = 0.093
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 124 FLGLRVKCLPSVAAASIRCSSRP---SRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL 180
FL L +K L + + RC S D D + +HT ++ FL+ PG L L
Sbjct: 194 FLNLTLKHLHLLDWLAARCPHARFLLSGDDD-VFVHTANVVRFLQAQPPGRHLFSGQLME 252
Query: 181 SDLYPHEAWS--FTFSKFLPGHEVGV-CSFARFSGEFPKSGPSAPDLALVEAAADGPEAP 237
+ ++WS F + PG V CS G F SGP+A AL AA P P
Sbjct: 253 GSVPIRDSWSKYFVPPQLFPGSAYPVYCS----GGGFLLSGPTA--RALRAAARHTPLFP 306
Query: 238 LQDRGWALCFSALGM 252
+ D +C G+
Sbjct: 307 IDDAYMGMCLERAGL 321
>gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens]
Length = 1017
Score = 34.7 bits (78), Expect = 0.21
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 351 GMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIK----- 405
G C+S ++PG+S + ++ F + L Y +A E +P PAE
Sbjct: 870 GQDCKSLADPGSSDDDDVSSLEEEQEFHMRSKNSLQY-SAKEHGMPEKNPAEGNTVFVYN 928
Query: 406 ----------EHERW---LAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTGQL 447
H +W L I+ +Q EV + +++ VD L+ W FTG+L
Sbjct: 929 DKKGTEDPGDSHLQWQLNLLTHIENVQNEVTSR-MDLIEKEVDVLESWLDFTGEL 982
>gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|239745488 PREDICTED: hypothetical protein XP_002343476 isoform 3
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|239745486 PREDICTED: hypothetical protein XP_002343475 isoform 2
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|239745484 PREDICTED: hypothetical protein XP_002343474 isoform 1
[Homo sapiens]
Length = 196
Score = 34.3 bits (77), Expect = 0.27
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 44/190 (23%)
Query: 234 PEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPL 293
P++P RG +C +L C + LG QG+ S+ E R PL
Sbjct: 3 PKSPALGRGPVVCDGSLSRASACTIK-----DALG----------QQGSGSMGEGFRPPL 47
Query: 294 DL-CPICLRKLQHVLGFRLIERYQRLYT---WTQAVVGTWPSQEA------------GEP 337
L PI L G + +ER +T W +G PS + G P
Sbjct: 48 SLPSPISRAGLG---GLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTP 104
Query: 338 SVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSY----LAASEA 393
+ D P +++ G S+S GTS + G+ + + P S+ LAA+ A
Sbjct: 105 ASPPDPAPWASEPGAMASSNSTTGTSST------TGTSSSGTPPPPAFSFSCLSLAAAAA 158
Query: 394 PLPPGGPAEA 403
G +A
Sbjct: 159 AAATSGALDA 168
>gi|119120918 coiled-coil domain containing 64 [Homo sapiens]
Length = 573
Score = 33.9 bits (76), Expect = 0.35
Identities = 45/173 (26%), Positives = 60/173 (34%), Gaps = 38/173 (21%)
Query: 345 PASADSGMCCESDSEPGTSVSEPLTPDA-----GSHTFASGPEEGLSYLAASEAPLPPG- 398
PA DS C E + G +V P A GS EE L+ LAA E P PG
Sbjct: 15 PAEPDSACCMELPAAAGDAVRSPAAAAALIFPGGSGELELALEEELALLAAGERPSDPGE 74
Query: 399 -------------GPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTG 445
GP + L++ Q E+DLV R AL
Sbjct: 75 HPQAEPGSLAEGAGPQPPPSQDPELLSVIRQ------KEKDLVLAARLGKAL-------- 120
Query: 446 QLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSARKLARAESAPRPWDGEES 498
++ SR + K L DK L ++ + R E+ W+G S
Sbjct: 121 ----LERNQDMSRQYEQMHKELTDKLEHLEQEKHELR-RRFENREGEWEGRVS 168
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 33.1 bits (74), Expect = 0.60
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 327 GTWPSQEAGEPSVWE-DTPPASAD--SGMCCESDSEPGTSVSEPLTPDAGSHTFA-SGPE 382
G PS+E GEP E PA+ + S SDS+PG+S + P + + + T A S
Sbjct: 138 GEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTP 197
Query: 383 EGLSYLAASEAPLPPGGPA 401
+ A++E P P PA
Sbjct: 198 KAQGPAASAEEPKPVEAPA 216
>gi|49355807 leucine zipper, down-regulated in cancer 1-like [Homo
sapiens]
Length = 239
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 11/156 (7%)
Query: 337 PSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLP 396
P + TPP S+ + + P TS+ EP + D G + AS P
Sbjct: 74 PGALQITPPISSITSNGTRPMTTPPTSLPEPFSGDPGRLAGFLMQMDRFMIFQASRFP-- 131
Query: 397 PGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPS 456
G AE + A + L E + + + + ++ F +L T + P
Sbjct: 132 --GEAERV-------AFLVSRLTGEAEKWAIPHMQPDSPLRNNYQGFLAELRRTYKSPLR 182
Query: 457 SRDSVGLRKVLGDKFSSLRRKLSARKLARAESAPRP 492
+RK + R++ R+LA A + P P
Sbjct: 183 HARRAQIRKTSASNRAVRERQMLCRQLASAGTGPCP 218
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 31.2 bits (69), Expect = 2.3
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 361 GTSVSEPLTPDAGS-HTFASGPEEGLSYLAASEAP-LPPGGPA------EAIKEHERWLA 412
G S ++P +P A + H A P + AA+ AP PP G + + ++E LA
Sbjct: 1322 GASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLA 1381
Query: 413 MCIQALQREVAEED 426
+QA++ ++ +ED
Sbjct: 1382 AALQAVEEKIRQED 1395
>gi|18379332 WW domain-containing adapter with a coiled-coil region
isoform 3 [Homo sapiens]
Length = 544
Score = 31.2 bits (69), Expect = 2.3
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 1/126 (0%)
Query: 312 IERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPD 371
+ER QR + V ++P V + T + SG D S + P T
Sbjct: 164 LEREQRQKEANKMAVNSFPKDRDYRREVMQATATSGFASGKSTSGDKPVSHSCTTPSTSS 223
Query: 372 AGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQA-LQREVAEEDLVQV 430
A S P S + S P P P R L +QA LQ + D+ ++
Sbjct: 224 ASGLNPTSAPPTSASAVPVSPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 283
Query: 431 DRAVDA 436
+ + A
Sbjct: 284 NEVLTA 289
>gi|211971072 FERM and PDZ domain containing 4 [Homo sapiens]
Length = 1322
Score = 31.2 bits (69), Expect = 2.3
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 346 ASADSGMCC-ESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASE-APLPPGGPAEA 403
+S D+G S S T V PL P G H +G++Y+ + E AP P A
Sbjct: 1216 SSVDAGCGTGSSGSACATPVESPLCPSLGKHLIPDASGKGVNYIPSEERAPGLPNHGATF 1275
Query: 404 IKEHERWLAMC----IQALQREVAEEDL 427
+ H + MC + AL + E L
Sbjct: 1276 KELHPQTEGMCPRMTVPALHTAINTEPL 1303
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 327 GTWPSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASG 380
G WPS + EPS TP ++ +G TS+SE P+A H+F++G
Sbjct: 2111 GKWPSSQQYEPSGTLPTPVLTSSAG--------SRTSLSE---PEAAEHSFSNG 2153
>gi|21389577 hypothetical protein LOC146705 [Homo sapiens]
Length = 525
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/56 (33%), Positives = 23/56 (41%)
Query: 223 DLALVEAAADGPEAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCL 278
+L+LV GP A L A G++ C V CHL G C LR L
Sbjct: 246 ELSLVRTVTRGPRAFLSREEAQHFIKACGLLNCEAVLQLLTCHLRGTSECTQLRAL 301
>gi|148612825 Rap GTPase interactor [Homo sapiens]
Length = 1075
Score = 30.8 bits (68), Expect = 3.0
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 356 SDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKE 406
S PG+ S+P+ P+ H G +L A PL P P A +E
Sbjct: 818 SPGRPGSGASQPVCPEGMHHVVLDG------HLEAPSCPLAPRDPGPAARE 862
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 30.8 bits (68), Expect = 3.0
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 330 PSQEAGEPSVWEDTPPASADSGMCCESDS-EPGTSVSEPLTPDAGSHTFASG---PEEGL 385
P + +P+ D P A A G S +PG S E TP + F G EEG+
Sbjct: 788 PPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAAEEEGV 847
Query: 386 SYLAASEAPLPPGGP 400
A P PG P
Sbjct: 848 PRPRAPPEPPDPGAP 862
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 30.8 bits (68), Expect = 3.0
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 343 TPPASADSGMCCESDSEPGTSVSEPLTPDAGS-HTFASGPEEGLSYLAASEAPLPPGGPA 401
TP AS S + S P ++ PD GS HT P GL A EAP P P
Sbjct: 322 TPEASQASPCPAVTPSAPSAAL-----PDEGSRHT----PSPGLPAEGAPEAPRPSSPPP 372
Query: 402 EAIKEH 407
E ++ H
Sbjct: 373 EVLEPH 378
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 30.4 bits (67), Expect = 3.9
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 331 SQEAGEPSVWEDTPPASADSGMCCESDSEPGTSV---SEPLTPDAGSHTFASGPEEGLSY 387
S A P+ E T PA+A E + P +V EP +P A T PEE S
Sbjct: 1054 SPAAAVPTPEEPTSPAAAVPTP--EEPTSPAAAVPTPEEPTSPAAAVPT----PEEPTSP 1107
Query: 388 LAASEAPLPPGGPAEAIKEHE 408
AA P P PA A+ E
Sbjct: 1108 AAAVPTPEEPASPAAAVPTPE 1128
Score = 30.4 bits (67), Expect = 3.9
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 331 SQEAGEPSVWEDTPPASADSGMCCESDSEPGTSV---SEPLTPDAGSHTFASGPEEGLSY 387
S A P+ E T PA+A E + P +V EP +P A T PEE S
Sbjct: 1067 SPAAAVPTPEEPTSPAAAVPTP--EEPTSPAAAVPTPEEPTSPAAAVPT----PEEPASP 1120
Query: 388 LAASEAPLPPGGPAEAIKEHE 408
AA P P PA A+ E
Sbjct: 1121 AAAVPTPEEPASPAAAVPTPE 1141
Score = 30.0 bits (66), Expect = 5.1
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 343 TPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAE 402
T P + + G E P T+V P PD + S PEE S AA P P PA
Sbjct: 961 TVPITEEDGTP-EGPVTPATTVHAPEEPDTAA-VRVSTPEEPASPAAAVPTPEEPTSPAA 1018
Query: 403 AIKEHE 408
A+ E
Sbjct: 1019 AVPTPE 1024
Score = 29.6 bits (65), Expect = 6.6
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 331 SQEAGEPSVWEDTPPASADSGMCCESDSEPGTSV---SEPLTPDAGSHTFASGPEEGLSY 387
S A P+ E T PA+A E + P +V EP +P A T PEE S
Sbjct: 1002 SPAAAVPTPEEPTSPAAAVPTP--EEPTSPAAAVPPPEEPTSPAAAVPT----PEEPTSP 1055
Query: 388 LAASEAPLPPGGPAEAIKEHE 408
AA P P PA A+ E
Sbjct: 1056 AAAVPTPEEPTSPAAAVPTPE 1076
Score = 29.6 bits (65), Expect = 6.6
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query: 330 PSQEAGEPSVWEDTPPASADSGMCCESDSEPGTSVSEPLTPDAGSHTFAS--GPEEGLSY 387
P +E P+ TP + EP + + TP+ + A+ PEE S
Sbjct: 1035 PPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSP 1094
Query: 388 LAASEAPLPPGGPAEAIKEHE 408
AA P P PA A+ E
Sbjct: 1095 AAAVPTPEEPTSPAAAVPTPE 1115
>gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo
sapiens]
Length = 359
Score = 30.4 bits (67), Expect = 3.9
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 379 SGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALD 438
SGPE+G AA+ A GG ++ EH + A Q R++ +L + ++A +
Sbjct: 46 SGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQI--RQIYHTELEKYEQACNEFT 103
Query: 439 RWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKL 478
M + +R P S ++ + ++ KFSS++ +L
Sbjct: 104 THVMNLLR-EQSRTRPISPKEIERMVGIIHRKFSSIQMQL 142
>gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]
Length = 434
Score = 30.4 bits (67), Expect = 3.9
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 379 SGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQREVAEEDLVQVDRAVDALD 438
SGPE+G AA+ A GG ++ EH + A Q R++ +L + ++A +
Sbjct: 121 SGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQI--RQIYHTELEKYEQACNEFT 178
Query: 439 RWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKL 478
M + +R P S ++ + ++ KFSS++ +L
Sbjct: 179 THVMNLLR-EQSRTRPISPKEIERMVGIIHRKFSSIQMQL 217
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,633,042
Number of Sequences: 37866
Number of extensions: 1152791
Number of successful extensions: 3372
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 3302
Number of HSP's gapped (non-prelim): 104
length of query: 498
length of database: 18,247,518
effective HSP length: 106
effective length of query: 392
effective length of database: 14,233,722
effective search space: 5579619024
effective search space used: 5579619024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.