Guide to the Human Genome
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Name: AMZ2 Sequence: fasta or formatted (302aa) NCBI GI: 75812976
Description:

archaemetzincins-2 isoform 2

Referenced in:

Metalloproteases

Other entries for this name:
alt prot [360aa] archaemetzincins-2 isoform 1
alt prot [360aa] archaemetzincins-2 isoform 1
alt prot [360aa] archaemetzincins-2 isoform 1
alt prot [360aa] archaemetzincins-2 isoform 1
alt prot [360aa] archaemetzincins-2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         15           1
 C cysteine            2.6          8           1
 D aspartate           5.6         17           2
 E glutamate           6.0         18           2
 F phenylalanine       5.3         16           2
 G glycine             5.0         15           1
 H histidine           3.6         11           1
 I isoleucine          7.3         22           2
 K lysine              7.9         24           4
 L leucine             9.3         28           3
 M methionine          1.7          5           1
 N asparagine          3.3         10           1
 P proline             6.0         18           1
 Q glutamine           4.3         13           1
 R arginine            4.0         12           2
 S serine              8.9         27           3
 T threonine           4.3         13           1
 V valine              4.3         13           2
 W tryptophan          2.0          6           1
 Y tyrosine            3.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   archaemetzincins-2 isoform 2 
AMZ2                  0.805   archaemetzincins-2 isoform 1 
AMZ2                  0.805   archaemetzincins-2 isoform 1 
AMZ2                  0.805   archaemetzincins-2 isoform 1 
AMZ2                  0.805   archaemetzincins-2 isoform 1 
AMZ2                  0.805   archaemetzincins-2 isoform 1 
AMZ1                  0.212   archaelysin family metallopeptidase 1 
ADAM20                0.008   ADAM metallopeptidase domain 20 preproprotein 
MKL1                  0.007   megakaryoblastic leukemia 1 protein 
ABI2                  0.007   abl interactor 2 
CACNG4                0.007   voltage-dependent calcium channel gamma-4 subunit [Ho...
HTR3A                 0.007   5-hydroxytryptamine (serotonin) receptor 3A isoform...
HTR3A                 0.007   5-hydroxytryptamine (serotonin) receptor 3A isoform...
HTR3A                 0.007   5-hydroxytryptamine (serotonin) receptor 3A isoform...
ADAMTS7               0.007   ADAM metallopeptidase with thrombospondin type 1 mot...
MMP21                 0.005   matrix metalloproteinase 21 preproprotein 
ADAM28                0.005   ADAM metallopeptidase domain 28 isoform 3 preproprot...
ADAM28                0.005   ADAM metallopeptidase domain 28 isoform 1 preproprot...
KIAA0494              0.005   hypothetical protein LOC9813 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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