Guide to the Human Genome
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Name: B3GNT6 Sequence: fasta or formatted (384aa) NCBI GI: 118918426
Description:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         44           3
 C cysteine            2.6         10           1
 D aspartate           4.4         17           3
 E glutamate           6.0         23           2
 F phenylalanine       5.5         21           1
 G glycine             7.3         28           3
 H histidine           3.6         14           1
 I isoleucine          1.3          5           1
 K lysine              1.6          6           1
 L leucine            13.0         50           3
 M methionine          1.8          7           1
 N asparagine          1.0          4           1
 P proline             9.4         36           2
 Q glutamine           3.9         15           2
 R arginine            9.1         35           2
 S serine              5.7         22           2
 T threonine           3.1         12           1
 V valine              4.9         19           2
 W tryptophan          1.8          7           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 
B3GNT3                0.432   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT7                0.324   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT4                0.314   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT9                0.297   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT2                0.275   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT8                0.214   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT5                0.193   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT2               0.174   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GALT1               0.167   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALT5               0.159   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.159   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.159   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.159   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.159   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT4               0.142   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
LOC100289720          0.138   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.138   PREDICTED: hypothetical protein XP_002342992 
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.129   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
B3GALT6               0.058   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.021   beta-1,3-N-acetylgalactosaminyltransferase 2 
LOC727838             0.013   PREDICTED: similar to cancer/testis antigen family ...
AKIRIN1               0.013   akirin 1 isoform 2 
C9orf75               0.013   hypothetical protein LOC286262 isoform 2 
C9orf75               0.013   hypothetical protein LOC286262 isoform 1 
LOC645529             0.012   PREDICTED: similar to Putative acrosin-like proteas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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