Guide to the Human Genome
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Name: OVOL2 Sequence: fasta or formatted (275aa) NCBI GI: 40807463
Description:

zinc finger protein 339

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         13           2
 C cysteine            4.4         12           1
 D aspartate           5.5         15           1
 E glutamate           6.2         17           4
 F phenylalanine       2.9          8           1
 G glycine             8.7         24           2
 H histidine           5.1         14           1
 I isoleucine          1.5          4           1
 K lysine              8.4         23           2
 L leucine             8.7         24           2
 M methionine          0.7          2           1
 N asparagine          2.5          7           1
 P proline             5.5         15           2
 Q glutamine           4.0         11           3
 R arginine            6.9         19           2
 S serine             10.5         29           4
 T threonine           5.8         16           2
 V valine              5.1         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 339 
OVOL1                 0.450   OVO-like 1 binding protein 
LOC728361             0.254   PREDICTED: similar to OVO homolog-like 1 
LOC728361             0.254   PREDICTED: similar to OVO homolog-like 1 
LOC728361             0.254   PREDICTED: similar to OVO homolog-like 1 
MYNN                  0.136   myoneurin 
ZNF561                0.125   zinc finger protein 561 
ZNF121                0.122   zinc finger protein 121 
LOC388559             0.120   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.120   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.120   PREDICTED: hypothetical protein LOC388559 
ZNF577                0.118   zinc finger protein 577 isoform b 
ZNF577                0.118   zinc finger protein 577 isoform a 
ZNF235                0.118   zinc finger protein 93 homolog 
ZNF562                0.116   zinc finger protein 562 isoform b 
ZNF562                0.116   zinc finger protein 562 isoform a 
ZNF562                0.116   zinc finger protein 562 isoform a 
FEZF1                 0.116   FEZ family zinc finger 1 isoform 2 
FEZF1                 0.116   FEZ family zinc finger 1 isoform 1 
ZNF509                0.116   zinc finger protein 509 
ZNF813                0.116   zinc finger protein 813 
ZNF585B               0.116   zinc finger protein 585B 
ZNF778                0.116   zinc finger protein 778 
ZNF782                0.116   zinc finger protein 782 
ZFP3                  0.116   zinc finger protein-3 
ZNF177                0.116   zinc finger protein 177 
ZNF585A               0.116   zinc finger protein 585A 
ZNF585A               0.116   zinc finger protein 585A 
ZNF93                 0.114   zinc finger protein 93 
ZNF429                0.114   zinc finger protein 429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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