Guide to the Human Genome
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Name: ERBB3 Sequence: fasta or formatted (183aa) NCBI GI: 54792102
Description:

erbB-3 isoform s precursor

Referenced in:

Epidermal Growth Factor

Other entries for this name:
alt prot [1342aa] erbB-3 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         13           2
 C cysteine            1.1          2           1
 D aspartate           4.4          8           3
 E glutamate           3.8          7           1
 F phenylalanine       3.3          6           1
 G glycine             7.1         13           1
 H histidine           1.1          2           1
 I isoleucine          1.6          3           1
 K lysine              1.6          3           1
 L leucine            15.8         29           2
 M methionine          2.7          5           1
 N asparagine          6.0         11           1
 P proline             4.9          9           1
 Q glutamine           6.0         11           1
 R arginine            4.9          9           1
 S serine              6.6         12           2
 T threonine           7.1         13           1
 V valine              9.8         18           2
 W tryptophan          1.1          2           1
 Y tyrosine            3.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erbB-3 isoform s precursor 
ERBB3                 0.747   erbB-3 isoform 1 precursor 
ERBB4                 0.324   v-erb-a erythroblastic leukemia viral oncogene homo...
ERBB4                 0.324   v-erb-a erythroblastic leukemia viral oncogene homolo...
EGFR                  0.238   epidermal growth factor receptor isoform a precursor...
EGFR                  0.238   epidermal growth factor receptor isoform d precursor...
EGFR                  0.238   epidermal growth factor receptor isoform c precursor...
EGFR                  0.238   epidermal growth factor receptor isoform b precursor...
ERBB2                 0.188   erbB-2 isoform a 
ERBB2                 0.168   erbB-2 isoform b 
IGF1R                 0.029   insulin-like growth factor 1 receptor precursor [Homo...
INSR                  0.026   insulin receptor isoform Short precursor 
INSR                  0.026   insulin receptor isoform Long precursor 
INSRR                 0.024   insulin receptor-related receptor precursor 
C14orf102             0.009   hypothetical protein LOC55051 isoform 2 
C14orf102             0.009   hypothetical protein LOC55051 isoform 1 
ABCB11                0.009   ATP-binding cassette, sub-family B (MDR/TAP), member...
WDR18                 0.009   WD repeat domain 18 
C5orf42               0.009   hypothetical protein LOC65250 
MYO7B                 0.006   myosin VIIB 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform a 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform g 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform f 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform e 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform d 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform c 
RASGRP4               0.006   RAS guanyl releasing protein 4 isoform b 
ICAM3                 0.006   intercellular adhesion molecule 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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