Guide to the Human Genome
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Name: PTK2B Sequence: fasta or formatted (1009aa) NCBI GI: 27886590
Description:

PTK2B protein tyrosine kinase 2 beta isoform a

Referenced in:

LIM Domain Proteins
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [1009aa] PTK2B protein tyrosine kinase 2 beta isoform a
alt mRNA [1009aa] PTK2B protein tyrosine kinase 2 beta isoform a
alt prot [967aa] PTK2B protein tyrosine kinase 2 beta isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         50           1
 C cysteine            2.3         23           1
 D aspartate           5.0         50           2
 E glutamate           9.0         91           3
 F phenylalanine       3.2         32           2
 G glycine             4.6         46           2
 H histidine           1.9         19           1
 I isoleucine          5.3         53           2
 K lysine              6.7         68           2
 L leucine            11.5        116           2
 M methionine          3.2         32           1
 N asparagine          3.9         39           1
 P proline             6.7         68           3
 Q glutamine           5.3         53           2
 R arginine            5.8         59           2
 S serine              5.8         59           3
 T threonine           4.2         42           2
 V valine              6.2         63           4
 W tryptophan          1.1         11           1
 Y tyrosine            3.5         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PTK2B protein tyrosine kinase 2 beta isoform a [Homo... 
PTK2B                 1.000   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 1.000   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.945   PTK2B protein tyrosine kinase 2 beta isoform b [Homo...
PTK2                  0.396   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.396   PTK2 protein tyrosine kinase 2 isoform a 
FER                   0.103   fer (fps/fes related) tyrosine kinase 
ABL1                  0.094   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.094   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ERBB4                 0.094   v-erb-a erythroblastic leukemia viral oncogene homolo...
ERBB4                 0.093   v-erb-a erythroblastic leukemia viral oncogene homo...
ABL2                  0.092   arg tyrosine kinase isoform c 
ABL2                  0.092   arg tyrosine kinase isoform b 
ABL2                  0.092   arg tyrosine kinase isoform e 
ABL2                  0.092   arg tyrosine kinase isoform d 
ABL2                  0.092   arg tyrosine kinase isoform a 
EPHB1                 0.092   ephrin receptor EphB1 precursor 
IGF1R                 0.091   insulin-like growth factor 1 receptor precursor [Homo...
HCK                   0.090   hemopoietic cell kinase isoform p61HCK 
ERBB2                 0.089   erbB-2 isoform b 
ERBB2                 0.089   erbB-2 isoform a 
EPHB2                 0.089   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.089   ephrin receptor EphB2 isoform 2 precursor 
EPHA5                 0.089   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.089   ephrin receptor EphA5 isoform a precursor 
EPHA3                 0.089   ephrin receptor EphA3 isoform a precursor 
FES                   0.089   feline sarcoma oncogene isoform 4 
FES                   0.089   feline sarcoma oncogene isoform 3 
FES                   0.089   feline sarcoma oncogene isoform 2 
FES                   0.089   feline sarcoma oncogene isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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