SC65 32643

Name: SC65	Sequence: fasta or formatted (437aa)		NCBI GI: 5454038
Description: synaptonemal complex protein SC65		Referenced in: Bone and Related Tissues Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 57 3 C cysteine 2.1 9 1 D aspartate 6.4 28 2 E glutamate 11.2 49 3 F phenylalanine 5.0 22 1 G glycine 4.8 21 2 H histidine 2.3 10 1 I isoleucine 0.2 1 1 K lysine 3.2 14 1 L leucine 11.9 52 3 M methionine 2.5 11 1 N asparagine 2.3 10 1 P proline 5.5 24 2 Q glutamine 4.3 19 2 R arginine 6.9 30 2 S serine 4.1 18 2 T threonine 2.3 10 1 V valine 3.7 16 1 W tryptophan 1.6 7 2 Y tyrosine 6.6 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptonemal complex protein SC65 CRTAP 0.447 cartilage associated protein precursor LEPRE1 0.184 leprecan 1 isoform 1 LEPRE1 0.184 leprecan 1 isoform 2 LOC100134403 0.167 PREDICTED: similar to cartilage associated protein ... LEPREL1 0.156 leprecan-like 1 isoform a LEPREL2 0.109 leprecan-like 2 LEPREL1 0.065 leprecan-like 1 isoform b RPGR 0.013 retinitis pigmentosa GTPase regulator isoform C [Hom... EIF3L 0.013 eukaryotic translation initiation factor 3 subunit 6 ... NEFM 0.010 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.010 neurofilament, medium polypeptide 150kDa isoform 2 ... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 1 pr... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pr... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pre... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pre... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 1 prec... PELP1 0.008 proline, glutamic acid and leucine rich protein 1 [... CENPB 0.008 centromere protein B LOC100133758 0.007 PREDICTED: hypothetical protein, partial ZEB1 0.007 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.007 zinc finger E-box binding homeobox 1 isoform b [Hom... APLP2 0.007 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.007 amyloid beta (A4) precursor-like protein 2 isoform ... APLP2 0.007 amyloid beta (A4) precursor-like protein 2 isoform 1 ... ZNF599 0.007 zinc finger protein 599 TAF1C 0.007 TBP-associated factor 1C isoform 1 TAF1C 0.007 TBP-associated factor 1C isoform 2 PRKCSH 0.007 protein kinase C substrate 80K-H isoform 1 KCTD1 0.007 potassium channel tetramerisation domain containing... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.